RNA–Protein interactions for RNA: ENST00000557729.1

LINC01956-201, Transcript of long intergenic non-protein coding RNA 1956, humanhuman

TSL 5 BASIC

Gene LINC01956, Length 695 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01956-201ENST00000557729 KRTAP19-3Q7Z4W3 81 aa7.34□□□□□ -1.23
LINC01956-201ENST00000557729 KRTAP23-1A1A580 65 aa7.33□□□□□ -1.24
LINC01956-201ENST00000557729 KRTAP12-3P60328 96 aa7.3□□□□□ -1.24
LINC01956-201ENST00000557729 LCE5AQ5TCM9 118 aa7.27□□□□□ -1.25
LINC01956-201ENST00000557729 MT1LQ93083 61 aa7.23□□□□□ -1.25
LINC01956-201ENST00000557729 MT1GP13640 62 aa7.22□□□□□ -1.25
LINC01956-201ENST00000557729 PP632Q6XCG6 107 aa7.21□□□□□ -1.26
LINC01956-201ENST00000557729 LCE3BQ5TA77 95 aa7.13□□□□□ -1.27
LINC01956-201ENST00000557729 KRTAP2-2Q9BYT5 123 aa7.11□□□□□ -1.27
LINC01956-201ENST00000557729 KRTAP2-1Q9BYU5 128 aa7.11□□□□□ -1.27
LINC01956-201ENST00000557729 MT1MQ8N339 61 aa7.09□□□□□ -1.27
LINC01956-201ENST00000557729 PMAIP1Q13794 54 aa7.01□□□□□ -1.29
LINC01956-201ENST00000557729 KRTAP15-1Q3LI76 137 aa6.99□□□□□ -1.29
LINC01956-201ENST00000557729 KRTAP19-4Q3LI73 84 aa6.94□□□□□ -1.3
LINC01956-201ENST00000557729 KRTAP4-7Q9BYR0 210 aa6.89□□□□□ -1.31
LINC01956-201ENST00000557729 KRTAP4-3Q9BYR4 195 aa6.89□□□□□ -1.31
LINC01956-201ENST00000557729 PRO0628Q9UI54 55 aa6.88□□□□□ -1.31
LINC01956-201ENST00000557729 DSTQ03001 7570 aaKnown RBP6.87□□□□□ -1.31
LINC01956-201ENST00000557729 LCE3CQ5T5A8 94 aa6.76□□□□□ -1.33
LINC01956-201ENST00000557729 PRAC1Q96KF2 57 aa6.61□□□□□ -1.35
LINC01956-201ENST00000557729 LCE4AQ5TA78 99 aa6.55□□□□□ -1.36
LINC01956-201ENST00000557729 LOC100996750A0A140TA64 210 aa6.5□□□□□ -1.37
LINC01956-201ENST00000557729 GPR98Q8WXG9 6306 aa6.49□□□□□ -1.37
LINC01956-201ENST00000557729 KRTAP4-9Q9BYQ8 210 aa6.49□□□□□ -1.37
LINC01956-201ENST00000557729 KTN1-AS1Q86SY8 53 aa6.48□□□□□ -1.37
LINC01956-201ENST00000557729 KRTAP5-4Q6L8H1 288 aa6.46□□□□□ -1.38
LINC01956-201ENST00000557729 KRTAP5-5Q701N2 237 aaPredicted RBP6.43□□□□□ -1.38
LINC01956-201ENST00000557729 MT4P47944 62 aa6.41□□□□□ -1.38
LINC01956-201ENST00000557729 LCE1DQ5T752 114 aa6.4□□□□□ -1.38
LINC01956-201ENST00000557729 KRTAP9-6A8MVA2 160 aa6.31□□□□□ -1.4
LINC01956-201ENST00000557729 KRTAP4-6Q9BYQ5 205 aa6.24□□□□□ -1.41
LINC01956-201ENST00000557729 KRTAP12-4P60329 112 aa6.22□□□□□ -1.41
LINC01956-201ENST00000557729 SVIPQ8NHG7 77 aa6.21□□□□□ -1.42
LINC01956-201ENST00000557729 HMCN1Q96RW7 5635 aa6.19□□□□□ -1.42
LINC01956-201ENST00000557729 MT1AP04731 61 aa6.17□□□□□ -1.42
LINC01956-201ENST00000557729 SPRR5A0A1B0GTR4 108 aa6.12□□□□□ -1.43
LINC01956-201ENST00000557729 KRTAP20-2Q3LI61 65 aa6.09□□□□□ -1.43
LINC01956-201ENST00000557729 KRTAP6-1Q3LI64 71 aa6.09□□□□□ -1.43
LINC01956-201ENST00000557729 SYNE1Q8NF91 8797 aaKnown RBP6.07□□□□□ -1.44
LINC01956-201ENST00000557729 AHNAK2Q8IVF2 5795 aa6.02□□□□□ -1.45
LINC01956-201ENST00000557729 KRTAP5-10Q6L8G5 202 aa6□□□□□ -1.45
LINC01956-201ENST00000557729 KRTAP9-4Q9BYQ2 154 aa5.92□□□□□ -1.46
LINC01956-201ENST00000557729 KRTAP5-3Q6L8H2 238 aa5.87□□□□□ -1.47
LINC01956-201ENST00000557729 KRTAP5-7Q6L8G8 165 aa5.81□□□□□ -1.48
LINC01956-201ENST00000557729 KRTAP5-2Q701N4 177 aa5.74□□□□□ -1.49
LINC01956-201ENST00000557729 KRTAP6-2Q3LI66 62 aa5.73□□□□□ -1.49
LINC01956-201ENST00000557729 MT3P25713 68 aa5.65□□□□□ -1.5
LINC01956-201ENST00000557729 LUZP6Q538Z0 58 aa5.59□□□□□ -1.51
LINC01956-201ENST00000557729 KRTAP4-11Q9BYQ6 195 aa5.45□□□□□ -1.54
LINC01956-201ENST00000557729 KRTAP5-8O75690 187 aa5.24□□□□□ -1.57
LINC01956-201ENST00000557729 OBSCNQ5VST9 7968 aa5.23□□□□□ -1.57
LINC01956-201ENST00000557729 KRTAP5-1Q6L8H4 278 aa5.06□□□□□ -1.6
LINC01956-201ENST00000557729 LCE1EQ5T753 118 aa5.04□□□□□ -1.6
LINC01956-201ENST00000557729 MUC5ACP98088 5654 aa5.02□□□□□ -1.61
LINC01956-201ENST00000557729 AHNAKQ09666 5890 aaKnown RBP5.01□□□□□ -1.61
LINC01956-201ENST00000557729 LCE3DQ9BYE3 92 aa4.99□□□□□ -1.61
LINC01956-201ENST00000557729 MUC5BQ9HC84 5762 aaPredicted RBP4.99□□□□□ -1.61
LINC01956-201ENST00000557729 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
LINC01956-201ENST00000557729 NDUFAF8A1L188 74 aa4.9□□□□□ -1.63
LINC01956-201ENST00000557729 LCE3EQ5T5B0 92 aa4.78□□□□□ -1.64
LINC01956-201ENST00000557729 LCE1BQ5T7P3 118 aa4.75□□□□□ -1.65
LINC01956-201ENST00000557729 KRTAP4-2Q9BYR5 136 aa4.7□□□□□ -1.66
LINC01956-201ENST00000557729 LCE1CQ5T751 118 aa4.68□□□□□ -1.66
LINC01956-201ENST00000557729 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
LINC01956-201ENST00000557729 KRTAP5-11Q6L8G4 156 aa4.19□□□□□ -1.74
LINC01956-201ENST00000557729 A0A0A0MQY5 61 aa4.16□□□□□ -1.74
LINC01956-201ENST00000557729 KRTAP4-12Q9BQ66 201 aa4.11□□□□□ -1.75
LINC01956-201ENST00000557729 INE1O15225 51 aa4.03□□□□□ -1.76
LINC01956-201ENST00000557729 KRTAP21-2Q3LI59 83 aa3.98□□□□□ -1.77
LINC01956-201ENST00000557729 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
LINC01956-201ENST00000557729 PRM1P04553 51 aa3.84□□□□□ -1.79
LINC01956-201ENST00000557729 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
LINC01956-201ENST00000557729 PHGR1C9JFL3 82 aa3.6□□□□□ -1.83
LINC01956-201ENST00000557729 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
LINC01956-201ENST00000557729 H3BS24 57 aa3.07□□□□□ -1.92
LINC01956-201ENST00000557729 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
LINC01956-201ENST00000557729 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 147.1 ms