RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 MT1MQ8N339 61 aa-0.28□□□□□ -2.45
GPHN-216ENST00000557678 RPL39LQ96EH5 51 aaKnown RBP-0.28□□□□□ -2.45
GPHN-216ENST00000557678 TOP2AP11388 1531 aaKnown RBP-0.28□□□□□ -2.45
GPHN-216ENST00000557678 ZFHX4Q86UP3 3567 aa-0.29□□□□□ -2.46
GPHN-216ENST00000557678 DNAH12Q6ZR08 3092 aa-0.29□□□□□ -2.46
GPHN-216ENST00000557678 BOD1L1Q8NFC6 3051 aa-0.29□□□□□ -2.46
GPHN-216ENST00000557678 DYNC1H1Q14204 4646 aaKnown RBP-0.29□□□□□ -2.46
GPHN-216ENST00000557678 MT1GP13640 62 aa-0.3□□□□□ -2.46
GPHN-216ENST00000557678 SNRPGP62308 76 aaKnown RBP-0.3□□□□□ -2.46
GPHN-216ENST00000557678 DNAH10Q8IVF4 4471 aa-0.3□□□□□ -2.46
GPHN-216ENST00000557678 DNHD1Q96M86 4753 aa-0.3□□□□□ -2.46
GPHN-216ENST00000557678 CSMD2Q7Z408 3487 aa-0.31□□□□□ -2.46
GPHN-216ENST00000557678 KIAA1109Q2LD37 5005 aa-0.31□□□□□ -2.46
GPHN-216ENST00000557678 DUOX1Q9NRD9 1551 aa-0.32□□□□□ -2.46
GPHN-216ENST00000557678 DEFB133Q30KQ1 61 aa-0.32□□□□□ -2.46
GPHN-216ENST00000557678 SMG1Q96Q15 3661 aaKnown RBP-0.32□□□□□ -2.46
GPHN-216ENST00000557678 A0A096LNI7 61 aa-0.33□□□□□ -2.46
GPHN-216ENST00000557678 CD52P31358 61 aa-0.33□□□□□ -2.46
GPHN-216ENST00000557678 MROH2BQ7Z745 1585 aa-0.33□□□□□ -2.46
GPHN-216ENST00000557678 RYR3Q15413 4870 aa-0.33□□□□□ -2.46
GPHN-216ENST00000557678 HTN1P15515 57 aa-0.34□□□□□ -2.46
GPHN-216ENST00000557678 MT1BP07438 61 aa-0.35□□□□□ -2.47
GPHN-216ENST00000557678 HYDINQ4G0P3 5121 aa-0.35□□□□□ -2.47
GPHN-216ENST00000557678 VPS13CQ709C8 3753 aa-0.35□□□□□ -2.47
GPHN-216ENST00000557678 H3BUX3 64 aa-0.36□□□□□ -2.47
GPHN-216ENST00000557678 DNAH5Q8TE73 4624 aa-0.36□□□□□ -2.47
GPHN-216ENST00000557678 RYR2Q92736 4967 aa-0.36□□□□□ -2.47
GPHN-216ENST00000557678 PCNTO95613 3336 aa-0.37□□□□□ -2.47
GPHN-216ENST00000557678 RNF213Q63HN8 5207 aa-0.37□□□□□ -2.47
GPHN-216ENST00000557678 DEFB124Q8NES8 71 aa-0.37□□□□□ -2.47
GPHN-216ENST00000557678 DEFB104AQ8WTQ1 72 aa-0.37□□□□□ -2.47
GPHN-216ENST00000557678 CEP350Q5VT06 3117 aa-0.37□□□□□ -2.47
GPHN-216ENST00000557678 K7EIM0 57 aa-0.38□□□□□ -2.47
GPHN-216ENST00000557678 ARHGAP5-AS1Q96IT6 56 aa-0.38□□□□□ -2.47
GPHN-216ENST00000557678 TTTY10Q9BZA0 68 aa-0.38□□□□□ -2.47
GPHN-216ENST00000557678 WDFY4Q6ZS81 3184 aa-0.39□□□□□ -2.47
GPHN-216ENST00000557678 MKI67P46013 3256 aaKnown RBP-0.39□□□□□ -2.47
GPHN-216ENST00000557678 SZT2Q5T011 3432 aa-0.4□□□□□ -2.47
GPHN-216ENST00000557678 PRCDQ00LT1 54 aa-0.4□□□□□ -2.47
GPHN-216ENST00000557678 MYO15AQ9UKN7 3530 aa-0.4□□□□□ -2.47
GPHN-216ENST00000557678 GCC2Q8IWJ2 1684 aa-0.4□□□□□ -2.47
GPHN-216ENST00000557678 MT1FP04733 61 aa-0.41□□□□□ -2.48
GPHN-216ENST00000557678 DMDP11532 3685 aa-0.42□□□□□ -2.48
GPHN-216ENST00000557678 MUC3AQ02505 3323 aa-0.42□□□□□ -2.48
GPHN-216ENST00000557678 WDFY3Q8IZQ1 3526 aa-0.42□□□□□ -2.48
GPHN-216ENST00000557678 SPEGQ15772 3267 aa-0.44□□□□□ -2.48
GPHN-216ENST00000557678 EP400Q96L91 3159 aa-0.45□□□□□ -2.48
GPHN-216ENST00000557678 TMEM167AQ8TBQ9 72 aa-0.46□□□□□ -2.48
GPHN-216ENST00000557678 LOC400499M0QZD8 3231 aa-0.47□□□□□ -2.49
GPHN-216ENST00000557678 ABCA13Q86UQ4 5058 aa-0.47□□□□□ -2.49
GPHN-216ENST00000557678 DCHS1Q96JQ0 3298 aa-0.47□□□□□ -2.49
GPHN-216ENST00000557678 LINC01556Q5JQF7 62 aa-0.48□□□□□ -2.49
GPHN-216ENST00000557678 CFAP47Q6ZTR5 3102 aa-0.49□□□□□ -2.49
GPHN-216ENST00000557678 UNC80Q8N2C7 3258 aa-0.5□□□□□ -2.49
GPHN-216ENST00000557678 KRTAP20-1Q3LI63 56 aa-0.5□□□□□ -2.49
GPHN-216ENST00000557678 H3BSH0 61 aa-0.51□□□□□ -2.49
GPHN-216ENST00000557678 USP34Q70CQ2 3546 aa-0.51□□□□□ -2.49
GPHN-216ENST00000557678 RPL39P5Q59GN2 51 aa-0.53□□□□□ -2.49
GPHN-216ENST00000557678 XIRP2A4UGR9 3374 aa-0.53□□□□□ -2.49
GPHN-216ENST00000557678 Q9Y3F1 56 aa-0.54□□□□□ -2.5
GPHN-216ENST00000557678 DEFB108AA8MXU0 73 aa-0.55□□□□□ -2.5
GPHN-216ENST00000557678 APELAP0DMC3 54 aa-0.55□□□□□ -2.5
GPHN-216ENST00000557678 A0A096LPF7 62 aa-0.56□□□□□ -2.5
GPHN-216ENST00000557678 ASPMQ8IZT6 3477 aa-0.57□□□□□ -2.5
GPHN-216ENST00000557678 DNAH14Q0VDD8 3507 aa-0.59□□□□□ -2.5
GPHN-216ENST00000557678 VCANP13611 3396 aa-0.61□□□□□ -2.51
GPHN-216ENST00000557678 BRCA2P51587 3418 aa-0.61□□□□□ -2.51
GPHN-216ENST00000557678 HTN3P15516 51 aa-0.62□□□□□ -2.51
GPHN-216ENST00000557678 KRTAP19-2Q3LHN2 52 aa-0.62□□□□□ -2.51
GPHN-216ENST00000557678 KRTAP19-6Q3LI70 58 aa-0.62□□□□□ -2.51
GPHN-216ENST00000557678 CDH23Q9H251 3354 aa-0.62□□□□□ -2.51
GPHN-216ENST00000557678 VPS13AQ96RL7 3174 aa-0.63□□□□□ -2.51
GPHN-216ENST00000557678 CENPFP49454 3210 aa-0.65□□□□□ -2.51
GPHN-216ENST00000557678 COX14Q96I36 57 aa-0.66□□□□□ -2.52
GPHN-216ENST00000557678 DEFB108BQ8NET1 73 aa-0.69□□□□□ -2.52
GPHN-216ENST00000557678 UTRNP46939 3433 aa-0.74□□□□□ -2.53
GPHN-216ENST00000557678 GOLGB1Q14789 3259 aaKnown RBP-0.8□□□□□ -2.54
GPHN-216ENST00000557678 STATHP02808 62 aa-0.85□□□□□ -2.55
Retrieved 78 of 20,778 RNA–protein pairs in 79.3 ms