RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 KRTAP19-7Q3SYF9 63 aa6.2□□□□□ -1.42
NEK9-211ENST00000557673 KRTAP19-3Q7Z4W3 81 aa6.19□□□□□ -1.42
NEK9-211ENST00000557673 MT1EP04732 61 aa6.15□□□□□ -1.42
NEK9-211ENST00000557673 CDC42SE1Q9NRR8 79 aa6.15□□□□□ -1.42
NEK9-211ENST00000557673 LCE1DQ5T752 114 aa6.14□□□□□ -1.43
NEK9-211ENST00000557673 LCE3AQ5TA76 89 aa6.12□□□□□ -1.43
NEK9-211ENST00000557673 HMCN1Q96RW7 5635 aa6.1□□□□□ -1.43
NEK9-211ENST00000557673 KRTAP25-1Q3LHN0 102 aa6.07□□□□□ -1.44
NEK9-211ENST00000557673 KRTAP19-5Q3LI72 72 aa6.07□□□□□ -1.44
NEK9-211ENST00000557673 AHNAK2Q8IVF2 5795 aa6.04□□□□□ -1.44
NEK9-211ENST00000557673 LCE4AQ5TA78 99 aa6.04□□□□□ -1.44
NEK9-211ENST00000557673 MT1GP13640 62 aa6.02□□□□□ -1.45
NEK9-211ENST00000557673 MT4P47944 62 aa6.02□□□□□ -1.45
NEK9-211ENST00000557673 PP632Q6XCG6 107 aa6.02□□□□□ -1.45
NEK9-211ENST00000557673 KRTAP5-10Q6L8G5 202 aa5.94□□□□□ -1.46
NEK9-211ENST00000557673 ROMO1P60602 79 aa5.93□□□□□ -1.46
NEK9-211ENST00000557673 KRTAP12-3P60328 96 aa5.88□□□□□ -1.47
NEK9-211ENST00000557673 MT1LQ93083 61 aa5.88□□□□□ -1.47
NEK9-211ENST00000557673 MT1MQ8N339 61 aa5.87□□□□□ -1.47
NEK9-211ENST00000557673 KRTAP23-1A1A580 65 aa5.85□□□□□ -1.47
NEK9-211ENST00000557673 BRK1Q8WUW1 75 aa5.84□□□□□ -1.47
NEK9-211ENST00000557673 KRTAP5-4Q6L8H1 288 aa5.83□□□□□ -1.48
NEK9-211ENST00000557673 KRTAP4-6Q9BYQ5 205 aa5.8□□□□□ -1.48
NEK9-211ENST00000557673 KRTAP5-7Q6L8G8 165 aa5.78□□□□□ -1.48
NEK9-211ENST00000557673 KRTAP4-3Q9BYR4 195 aa5.75□□□□□ -1.49
NEK9-211ENST00000557673 KRTAP5-3Q6L8H2 238 aa5.69□□□□□ -1.5
NEK9-211ENST00000557673 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
NEK9-211ENST00000557673 KRTAP4-7Q9BYR0 210 aa5.61□□□□□ -1.51
NEK9-211ENST00000557673 KRTAP15-1Q3LI76 137 aa5.6□□□□□ -1.51
NEK9-211ENST00000557673 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.51
NEK9-211ENST00000557673 KRTAP19-4Q3LI73 84 aa5.54□□□□□ -1.52
NEK9-211ENST00000557673 KRTAP20-2Q3LI61 65 aa5.52□□□□□ -1.53
NEK9-211ENST00000557673 SVIPQ8NHG7 77 aa5.49□□□□□ -1.53
NEK9-211ENST00000557673 PMAIP1Q13794 54 aa5.48□□□□□ -1.53
NEK9-211ENST00000557673 KRTAP12-4P60329 112 aa5.45□□□□□ -1.54
NEK9-211ENST00000557673 LCE3CQ5T5A8 94 aa5.43□□□□□ -1.54
NEK9-211ENST00000557673 KRTAP5-5Q701N2 237 aaPredicted RBP5.41□□□□□ -1.54
NEK9-211ENST00000557673 PRO0628Q9UI54 55 aa5.39□□□□□ -1.55
NEK9-211ENST00000557673 PRAC1Q96KF2 57 aa5.24□□□□□ -1.57
NEK9-211ENST00000557673 SYNE1Q8NF91 8797 aaKnown RBP5.24□□□□□ -1.57
NEK9-211ENST00000557673 KRTAP4-11Q9BYQ6 195 aa5.16□□□□□ -1.58
NEK9-211ENST00000557673 KRTAP9-6A8MVA2 160 aa5.15□□□□□ -1.59
NEK9-211ENST00000557673 AHNAKQ09666 5890 aaKnown RBP5.14□□□□□ -1.59
NEK9-211ENST00000557673 KTN1-AS1Q86SY8 53 aa5.1□□□□□ -1.59
NEK9-211ENST00000557673 MUC5ACP98088 5654 aa5.08□□□□□ -1.6
NEK9-211ENST00000557673 MUC5BQ9HC84 5762 aaPredicted RBP5.04□□□□□ -1.6
NEK9-211ENST00000557673 KRTAP5-2Q701N4 177 aa5.03□□□□□ -1.6
NEK9-211ENST00000557673 MT1AP04731 61 aa5□□□□□ -1.61
NEK9-211ENST00000557673 KRTAP5-8O75690 187 aa4.99□□□□□ -1.61
NEK9-211ENST00000557673 KRTAP6-1Q3LI64 71 aa4.98□□□□□ -1.61
NEK9-211ENST00000557673 KRTAP4-12Q9BQ66 201 aa4.97□□□□□ -1.61
NEK9-211ENST00000557673 KRTAP9-9Q9BYP9 154 aa4.85□□□□□ -1.63
NEK9-211ENST00000557673 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
NEK9-211ENST00000557673 KRTAP6-2Q3LI66 62 aa4.79□□□□□ -1.64
NEK9-211ENST00000557673 OBSCNQ5VST9 7968 aa4.78□□□□□ -1.64
NEK9-211ENST00000557673 H3BS24 57 aa4.61□□□□□ -1.67
NEK9-211ENST00000557673 MT3P25713 68 aa4.58□□□□□ -1.68
NEK9-211ENST00000557673 KRTAP5-1Q6L8H4 278 aa4.58□□□□□ -1.68
NEK9-211ENST00000557673 KRTAP4-2Q9BYR5 136 aa4.41□□□□□ -1.7
NEK9-211ENST00000557673 LUZP6Q538Z0 58 aa4.32□□□□□ -1.72
NEK9-211ENST00000557673 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
NEK9-211ENST00000557673 A0A0A0MQY5 61 aa4.17□□□□□ -1.74
NEK9-211ENST00000557673 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
NEK9-211ENST00000557673 LCE1CQ5T751 118 aa3.98□□□□□ -1.77
NEK9-211ENST00000557673 LCE3DQ9BYE3 92 aa3.98□□□□□ -1.77
NEK9-211ENST00000557673 NDUFAF8A1L188 74 aa3.81□□□□□ -1.8
NEK9-211ENST00000557673 LCE3EQ5T5B0 92 aa3.8□□□□□ -1.8
NEK9-211ENST00000557673 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
NEK9-211ENST00000557673 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
NEK9-211ENST00000557673 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
NEK9-211ENST00000557673 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
NEK9-211ENST00000557673 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
NEK9-211ENST00000557673 INE1O15225 51 aa3.11□□□□□ -1.91
NEK9-211ENST00000557673 PRM1P04553 51 aa3.06□□□□□ -1.92
NEK9-211ENST00000557673 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
NEK9-211ENST00000557673 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
NEK9-211ENST00000557673 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
NEK9-211ENST00000557673 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 73.4 ms