RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 KRTAP12-1P59990 96 aa4.64□□□□□ -1.67
RTN1-208ENST00000557422 SPINT4Q6UDR6 99 aa4.61□□□□□ -1.67
RTN1-208ENST00000557422 MT4P47944 62 aa4.6□□□□□ -1.67
RTN1-208ENST00000557422 KRTAP5-10Q6L8G5 202 aa4.6□□□□□ -1.67
RTN1-208ENST00000557422 KRTAP19-3Q7Z4W3 81 aa4.6□□□□□ -1.67
RTN1-208ENST00000557422 HMCN1Q96RW7 5635 aa4.59□□□□□ -1.67
RTN1-208ENST00000557422 KRTAP19-7Q3SYF9 63 aa4.57□□□□□ -1.68
RTN1-208ENST00000557422 LCE4AQ5TA78 99 aa4.57□□□□□ -1.68
RTN1-208ENST00000557422 AHNAK2Q8IVF2 5795 aa4.57□□□□□ -1.68
RTN1-208ENST00000557422 MT1EP04732 61 aa4.56□□□□□ -1.68
RTN1-208ENST00000557422 ROMO1P60602 79 aa4.5□□□□□ -1.69
RTN1-208ENST00000557422 KTN1-AS1Q86SY8 53 aa4.49□□□□□ -1.69
RTN1-208ENST00000557422 CAMK2N1Q7Z7J9 78 aa4.48□□□□□ -1.69
RTN1-208ENST00000557422 KRTAP5-7Q6L8G8 165 aa4.47□□□□□ -1.69
RTN1-208ENST00000557422 MT1GP13640 62 aa4.45□□□□□ -1.7
RTN1-208ENST00000557422 SVIPQ8NHG7 77 aa4.45□□□□□ -1.7
RTN1-208ENST00000557422 KRTAP4-6Q9BYQ5 205 aa4.44□□□□□ -1.7
RTN1-208ENST00000557422 KRTAP5-4Q6L8H1 288 aa4.43□□□□□ -1.7
RTN1-208ENST00000557422 PP632Q6XCG6 107 aa4.39□□□□□ -1.71
RTN1-208ENST00000557422 KRTAP5-3Q6L8H2 238 aa4.38□□□□□ -1.71
RTN1-208ENST00000557422 C10orf95Q9H7T3 257 aa4.38□□□□□ -1.71
RTN1-208ENST00000557422 MT1MQ8N339 61 aa4.37□□□□□ -1.71
RTN1-208ENST00000557422 KRTAP19-5Q3LI72 72 aa4.35□□□□□ -1.71
RTN1-208ENST00000557422 KRTAP25-1Q3LHN0 102 aa4.34□□□□□ -1.71
RTN1-208ENST00000557422 SPRR5A0A1B0GTR4 108 aa4.3□□□□□ -1.72
RTN1-208ENST00000557422 TNP1P09430 55 aa4.3□□□□□ -1.72
RTN1-208ENST00000557422 PRAC1Q96KF2 57 aa4.3□□□□□ -1.72
RTN1-208ENST00000557422 KRTAP4-3Q9BYR4 195 aa4.3□□□□□ -1.72
RTN1-208ENST00000557422 MT1LQ93083 61 aa4.28□□□□□ -1.72
RTN1-208ENST00000557422 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
RTN1-208ENST00000557422 KRTAP20-2Q3LI61 65 aa4.2□□□□□ -1.74
RTN1-208ENST00000557422 KRTAP4-7Q9BYR0 210 aa4.07□□□□□ -1.76
RTN1-208ENST00000557422 KRTAP12-4P60329 112 aa4.05□□□□□ -1.76
RTN1-208ENST00000557422 KRTAP5-5Q701N2 237 aaPredicted RBP4.05□□□□□ -1.76
RTN1-208ENST00000557422 LCE3AQ5TA76 89 aa4.04□□□□□ -1.76
RTN1-208ENST00000557422 KRTAP4-11Q9BYQ6 195 aa3.94□□□□□ -1.78
RTN1-208ENST00000557422 KRTAP12-3P60328 96 aa3.93□□□□□ -1.78
RTN1-208ENST00000557422 AHNAKQ09666 5890 aaKnown RBP3.89□□□□□ -1.79
RTN1-208ENST00000557422 H3BS24 57 aa3.89□□□□□ -1.79
RTN1-208ENST00000557422 LOC100996750A0A140TA64 210 aa3.88□□□□□ -1.79
RTN1-208ENST00000557422 SYNE1Q8NF91 8797 aaKnown RBP3.87□□□□□ -1.79
RTN1-208ENST00000557422 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
RTN1-208ENST00000557422 KRTAP15-1Q3LI76 137 aa3.86□□□□□ -1.79
RTN1-208ENST00000557422 KRTAP19-4Q3LI73 84 aa3.84□□□□□ -1.79
RTN1-208ENST00000557422 KRTAP5-8O75690 187 aa3.83□□□□□ -1.8
RTN1-208ENST00000557422 KRTAP5-2Q701N4 177 aa3.8□□□□□ -1.8
RTN1-208ENST00000557422 MUC5BQ9HC84 5762 aaPredicted RBP3.79□□□□□ -1.8
RTN1-208ENST00000557422 KRTAP9-9Q9BYP9 154 aa3.69□□□□□ -1.82
RTN1-208ENST00000557422 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
RTN1-208ENST00000557422 KRTAP6-1Q3LI64 71 aa3.65□□□□□ -1.83
RTN1-208ENST00000557422 MT1AP04731 61 aa3.63□□□□□ -1.83
RTN1-208ENST00000557422 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
RTN1-208ENST00000557422 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
RTN1-208ENST00000557422 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
RTN1-208ENST00000557422 KRTAP9-4Q9BYQ2 154 aa3.56□□□□□ -1.84
RTN1-208ENST00000557422 KRTAP5-1Q6L8H4 278 aa3.49□□□□□ -1.85
RTN1-208ENST00000557422 NDUFAF8A1L188 74 aa3.44□□□□□ -1.86
RTN1-208ENST00000557422 KRTAP9-6A8MVA2 160 aa3.41□□□□□ -1.86
RTN1-208ENST00000557422 MT3P25713 68 aa3.34□□□□□ -1.87
RTN1-208ENST00000557422 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
RTN1-208ENST00000557422 A0A0A0MQY5 61 aa3.17□□□□□ -1.9
RTN1-208ENST00000557422 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
RTN1-208ENST00000557422 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
RTN1-208ENST00000557422 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
RTN1-208ENST00000557422 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
RTN1-208ENST00000557422 INE1O15225 51 aa2.94□□□□□ -1.94
RTN1-208ENST00000557422 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
RTN1-208ENST00000557422 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
RTN1-208ENST00000557422 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
RTN1-208ENST00000557422 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
RTN1-208ENST00000557422 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
RTN1-208ENST00000557422 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.63□□□□□ -1.99
RTN1-208ENST00000557422 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
RTN1-208ENST00000557422 PRM1P04553 51 aa2.31□□□□□ -2.04
RTN1-208ENST00000557422 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
RTN1-208ENST00000557422 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
RTN1-208ENST00000557422 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
RTN1-208ENST00000557422 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 231.7 ms