RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 ROMO1P60602 79 aa7.91□□□□□ -1.14
FOXA1-205ENST00000557418 LCE3AQ5TA76 89 aa7.88□□□□□ -1.15
FOXA1-205ENST00000557418 KRTAP19-7Q3SYF9 63 aa7.87□□□□□ -1.15
FOXA1-205ENST00000557418 MT1EP04732 61 aa7.8□□□□□ -1.16
FOXA1-205ENST00000557418 LCE5AQ5TCM9 118 aa7.77□□□□□ -1.17
FOXA1-205ENST00000557418 KRTAP19-3Q7Z4W3 81 aa7.76□□□□□ -1.17
FOXA1-205ENST00000557418 KRTAP19-5Q3LI72 72 aa7.74□□□□□ -1.17
FOXA1-205ENST00000557418 KRTAP23-1A1A580 65 aa7.69□□□□□ -1.18
FOXA1-205ENST00000557418 DSTQ03001 7570 aaKnown RBP7.67□□□□□ -1.18
FOXA1-205ENST00000557418 MT1GP13640 62 aa7.6□□□□□ -1.19
FOXA1-205ENST00000557418 PRO0628Q9UI54 55 aa7.59□□□□□ -1.19
FOXA1-205ENST00000557418 PMAIP1Q13794 54 aa7.58□□□□□ -1.2
FOXA1-205ENST00000557418 KRTAP12-3P60328 96 aa7.56□□□□□ -1.2
FOXA1-205ENST00000557418 PP632Q6XCG6 107 aa7.55□□□□□ -1.2
FOXA1-205ENST00000557418 MT1LQ93083 61 aa7.46□□□□□ -1.22
FOXA1-205ENST00000557418 MT1MQ8N339 61 aa7.44□□□□□ -1.22
FOXA1-205ENST00000557418 KRTAP4-9Q9BYQ8 210 aa7.44□□□□□ -1.22
FOXA1-205ENST00000557418 KRTAP15-1Q3LI76 137 aa7.27□□□□□ -1.25
FOXA1-205ENST00000557418 KRTAP4-3Q9BYR4 195 aa7.27□□□□□ -1.25
FOXA1-205ENST00000557418 LCE4AQ5TA78 99 aa7.26□□□□□ -1.25
FOXA1-205ENST00000557418 LCE1DQ5T752 114 aa7.25□□□□□ -1.25
FOXA1-205ENST00000557418 GPR98Q8WXG9 6306 aa7.21□□□□□ -1.25
FOXA1-205ENST00000557418 PRAC1Q96KF2 57 aa7.2□□□□□ -1.26
FOXA1-205ENST00000557418 MT4P47944 62 aa7.19□□□□□ -1.26
FOXA1-205ENST00000557418 SVIPQ8NHG7 77 aa7.18□□□□□ -1.26
FOXA1-205ENST00000557418 KRTAP19-4Q3LI73 84 aa7.15□□□□□ -1.26
FOXA1-205ENST00000557418 KRTAP4-7Q9BYR0 210 aa7.14□□□□□ -1.27
FOXA1-205ENST00000557418 KTN1-AS1Q86SY8 53 aa7.11□□□□□ -1.27
FOXA1-205ENST00000557418 KRTAP5-4Q6L8H1 288 aa7.09□□□□□ -1.27
FOXA1-205ENST00000557418 LOC100996750A0A140TA64 210 aa7.07□□□□□ -1.28
FOXA1-205ENST00000557418 KRTAP4-6Q9BYQ5 205 aa7.07□□□□□ -1.28
FOXA1-205ENST00000557418 HMCN1Q96RW7 5635 aa7.07□□□□□ -1.28
FOXA1-205ENST00000557418 LCE3CQ5T5A8 94 aa7.03□□□□□ -1.28
FOXA1-205ENST00000557418 AHNAK2Q8IVF2 5795 aa6.86□□□□□ -1.31
FOXA1-205ENST00000557418 KRTAP5-5Q701N2 237 aaPredicted RBP6.79□□□□□ -1.32
FOXA1-205ENST00000557418 KRTAP5-10Q6L8G5 202 aa6.72□□□□□ -1.33
FOXA1-205ENST00000557418 KRTAP12-4P60329 112 aa6.7□□□□□ -1.34
FOXA1-205ENST00000557418 KRTAP20-2Q3LI61 65 aa6.7□□□□□ -1.34
FOXA1-205ENST00000557418 SPRR5A0A1B0GTR4 108 aa6.68□□□□□ -1.34
FOXA1-205ENST00000557418 KRTAP9-6A8MVA2 160 aa6.68□□□□□ -1.34
FOXA1-205ENST00000557418 KRTAP4-12Q9BQ66 201 aa6.6□□□□□ -1.35
FOXA1-205ENST00000557418 KRTAP5-3Q6L8H2 238 aa6.59□□□□□ -1.35
FOXA1-205ENST00000557418 SYNE1Q8NF91 8797 aaKnown RBP6.53□□□□□ -1.36
FOXA1-205ENST00000557418 KRTAP5-7Q6L8G8 165 aa6.48□□□□□ -1.37
FOXA1-205ENST00000557418 MT1AP04731 61 aa6.35□□□□□ -1.39
FOXA1-205ENST00000557418 KRTAP6-1Q3LI64 71 aa6.31□□□□□ -1.4
FOXA1-205ENST00000557418 KRTAP9-9Q9BYP9 154 aa6.23□□□□□ -1.41
FOXA1-205ENST00000557418 KRTAP9-4Q9BYQ2 154 aa6.23□□□□□ -1.41
FOXA1-205ENST00000557418 KRTAP5-2Q701N4 177 aa6.2□□□□□ -1.42
FOXA1-205ENST00000557418 KRTAP4-11Q9BYQ6 195 aa6.14□□□□□ -1.43
FOXA1-205ENST00000557418 KRTAP6-2Q3LI66 62 aa6.04□□□□□ -1.44
FOXA1-205ENST00000557418 KRTAP5-8O75690 187 aa5.91□□□□□ -1.46
FOXA1-205ENST00000557418 LUZP6Q538Z0 58 aa5.88□□□□□ -1.47
FOXA1-205ENST00000557418 MT3P25713 68 aa5.84□□□□□ -1.47
FOXA1-205ENST00000557418 OBSCNQ5VST9 7968 aa5.84□□□□□ -1.48
FOXA1-205ENST00000557418 A0A0A0MQY5 61 aa5.69□□□□□ -1.5
FOXA1-205ENST00000557418 AHNAKQ09666 5890 aaKnown RBP5.65□□□□□ -1.5
FOXA1-205ENST00000557418 MUC5BQ9HC84 5762 aaPredicted RBP5.61□□□□□ -1.51
FOXA1-205ENST00000557418 MUC5ACP98088 5654 aa5.6□□□□□ -1.51
FOXA1-205ENST00000557418 KRTAP5-1Q6L8H4 278 aa5.57□□□□□ -1.52
FOXA1-205ENST00000557418 KRTAP4-2Q9BYR5 136 aa5.52□□□□□ -1.53
FOXA1-205ENST00000557418 NDUFAF8A1L188 74 aa5.39□□□□□ -1.55
FOXA1-205ENST00000557418 LCE1EQ5T753 118 aa5.35□□□□□ -1.55
FOXA1-205ENST00000557418 LCE3DQ9BYE3 92 aa5.17□□□□□ -1.58
FOXA1-205ENST00000557418 LCE1BQ5T7P3 118 aa5.07□□□□□ -1.6
FOXA1-205ENST00000557418 LCE3EQ5T5B0 92 aa4.97□□□□□ -1.61
FOXA1-205ENST00000557418 LCE1CQ5T751 118 aa4.96□□□□□ -1.62
FOXA1-205ENST00000557418 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.49□□□□□ -1.69
FOXA1-205ENST00000557418 KRTAP5-11Q6L8G4 156 aa4.47□□□□□ -1.69
FOXA1-205ENST00000557418 INE1O15225 51 aa4.43□□□□□ -1.7
FOXA1-205ENST00000557418 LCE1FQ5T754 118 aa4.39□□□□□ -1.71
FOXA1-205ENST00000557418 KRTAP21-2Q3LI59 83 aa4.15□□□□□ -1.75
FOXA1-205ENST00000557418 PRM1P04553 51 aa4.09□□□□□ -1.75
FOXA1-205ENST00000557418 PHGR1C9JFL3 82 aa3.94□□□□□ -1.78
FOXA1-205ENST00000557418 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
FOXA1-205ENST00000557418 MUC19Q7Z5P9 8384 aa3.61□□□□□ -1.83
FOXA1-205ENST00000557418 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
FOXA1-205ENST00000557418 MUC16Q8WXI7 14507 aa2.51□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 72.8 ms