RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 KRTAP10-12P60413 245 aa3.13□□□□□ -1.91
PSEN1-222ENST00000557356 SPINT4Q6UDR6 99 aa3.13□□□□□ -1.91
PSEN1-222ENST00000557356 KRTAP10-7P60409 375 aaPredicted RBP3.11□□□□□ -1.91
PSEN1-222ENST00000557356 ROMO1P60602 79 aa3.11□□□□□ -1.91
PSEN1-222ENST00000557356 KRTAP25-1Q3LHN0 102 aa3.11□□□□□ -1.91
PSEN1-222ENST00000557356 SPRR2EP22531 72 aa3.08□□□□□ -1.92
PSEN1-222ENST00000557356 SPRR2BP35325 72 aa3.08□□□□□ -1.92
PSEN1-222ENST00000557356 SPRR2AP35326 72 aa3.08□□□□□ -1.92
PSEN1-222ENST00000557356 KRTAP12-1P59990 96 aa3.08□□□□□ -1.92
PSEN1-222ENST00000557356 KRTAP20-1Q3LI63 56 aa3.06□□□□□ -1.92
PSEN1-222ENST00000557356 KRTAP2-3P0C7H8 128 aa3.04□□□□□ -1.92
PSEN1-222ENST00000557356 KRTAP2-4Q9BYR9 128 aa3.04□□□□□ -1.92
PSEN1-222ENST00000557356 LCE1AQ5T7P2 110 aa3.03□□□□□ -1.92
PSEN1-222ENST00000557356 NEBP20929 6669 aa3.01□□□□□ -1.93
PSEN1-222ENST00000557356 KMT2DO14686 5537 aa2.99□□□□□ -1.93
PSEN1-222ENST00000557356 TNP1P09430 55 aa2.99□□□□□ -1.93
PSEN1-222ENST00000557356 SPRR2DP22532 72 aa2.98□□□□□ -1.93
PSEN1-222ENST00000557356 KRTAP2-2Q9BYT5 123 aa2.95□□□□□ -1.94
PSEN1-222ENST00000557356 KRTAP2-1Q9BYU5 128 aa2.95□□□□□ -1.94
PSEN1-222ENST00000557356 MUC12Q9UKN1 5478 aa2.94□□□□□ -1.94
PSEN1-222ENST00000557356 C10orf95Q9H7T3 257 aa2.93□□□□□ -1.94
PSEN1-222ENST00000557356 KRTAP19-7Q3SYF9 63 aa2.92□□□□□ -1.94
PSEN1-222ENST00000557356 MT1EP04732 61 aa2.9□□□□□ -1.95
PSEN1-222ENST00000557356 KRTAP19-3Q7Z4W3 81 aa2.89□□□□□ -1.95
PSEN1-222ENST00000557356 MDN1Q9NU22 5596 aa2.88□□□□□ -1.95
PSEN1-222ENST00000557356 KRTAP19-5Q3LI72 72 aa2.88□□□□□ -1.95
PSEN1-222ENST00000557356 PP632Q6XCG6 107 aa2.88□□□□□ -1.95
PSEN1-222ENST00000557356 MT1GP13640 62 aa2.87□□□□□ -1.95
PSEN1-222ENST00000557356 LCE3AQ5TA76 89 aa2.85□□□□□ -1.95
PSEN1-222ENST00000557356 KRTAP12-3P60328 96 aa2.79□□□□□ -1.96
PSEN1-222ENST00000557356 MT1LQ93083 61 aa2.79□□□□□ -1.96
PSEN1-222ENST00000557356 MT1MQ8N339 61 aa2.75□□□□□ -1.97
PSEN1-222ENST00000557356 NDUFAF8A1L188 74 aa2.67□□□□□ -1.98
PSEN1-222ENST00000557356 DSTQ03001 7570 aaKnown RBP2.67□□□□□ -1.98
PSEN1-222ENST00000557356 LUZP6Q538Z0 58 aa2.63□□□□□ -1.99
PSEN1-222ENST00000557356 KRTAP4-3Q9BYR4 195 aa2.63□□□□□ -1.99
PSEN1-222ENST00000557356 KRTAP5-4Q6L8H1 288 aa2.6□□□□□ -1.99
PSEN1-222ENST00000557356 SPRR5A0A1B0GTR4 108 aa2.59□□□□□ -1.99
PSEN1-222ENST00000557356 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
PSEN1-222ENST00000557356 MT4P47944 62 aa2.57□□□□□ -2
PSEN1-222ENST00000557356 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
PSEN1-222ENST00000557356 A0A0A0MQY5 61 aa2.52□□□□□ -2.01
PSEN1-222ENST00000557356 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
PSEN1-222ENST00000557356 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
PSEN1-222ENST00000557356 KRTAP5-5Q701N2 237 aaPredicted RBP2.5□□□□□ -2.01
PSEN1-222ENST00000557356 LCE1EQ5T753 118 aa2.46□□□□□ -2.02
PSEN1-222ENST00000557356 MT3P25713 68 aa2.44□□□□□ -2.02
PSEN1-222ENST00000557356 KRTAP20-2Q3LI61 65 aa2.43□□□□□ -2.02
PSEN1-222ENST00000557356 MT1AP04731 61 aa2.4□□□□□ -2.03
PSEN1-222ENST00000557356 GPR98Q8WXG9 6306 aa2.38□□□□□ -2.03
PSEN1-222ENST00000557356 HMCN1Q96RW7 5635 aa2.36□□□□□ -2.03
PSEN1-222ENST00000557356 KRTAP5-10Q6L8G5 202 aa2.36□□□□□ -2.03
PSEN1-222ENST00000557356 KRTAP9-6A8MVA2 160 aa2.34□□□□□ -2.03
PSEN1-222ENST00000557356 KRTAP6-1Q3LI64 71 aa2.33□□□□□ -2.04
PSEN1-222ENST00000557356 INE1O15225 51 aa2.31□□□□□ -2.04
PSEN1-222ENST00000557356 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
PSEN1-222ENST00000557356 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
PSEN1-222ENST00000557356 KRTAP6-2Q3LI66 62 aa2.23□□□□□ -2.05
PSEN1-222ENST00000557356 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
PSEN1-222ENST00000557356 SYNE1Q8NF91 8797 aaKnown RBP2.22□□□□□ -2.05
PSEN1-222ENST00000557356 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
PSEN1-222ENST00000557356 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
PSEN1-222ENST00000557356 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
PSEN1-222ENST00000557356 KRTAP4-4Q9BYR3 166 aa2.11□□□□□ -2.07
PSEN1-222ENST00000557356 OBSCNQ5VST9 7968 aa2.06□□□□□ -2.08
PSEN1-222ENST00000557356 LCE3EQ5T5B0 92 aa1.92□□□□□ -2.1
PSEN1-222ENST00000557356 LCE3DQ9BYE3 92 aa1.9□□□□□ -2.11
PSEN1-222ENST00000557356 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
PSEN1-222ENST00000557356 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
PSEN1-222ENST00000557356 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
PSEN1-222ENST00000557356 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
PSEN1-222ENST00000557356 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
PSEN1-222ENST00000557356 PRM1P04553 51 aa1.6□□□□□ -2.15
PSEN1-222ENST00000557356 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
PSEN1-222ENST00000557356 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
PSEN1-222ENST00000557356 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.18
PSEN1-222ENST00000557356 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.23
PSEN1-222ENST00000557356 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 55.6 ms