RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 MT1LQ93083 61 aa7.49□□□□□ -1.21
SEC23A-213ENST00000557280 ROMO1P60602 79 aa7.47□□□□□ -1.21
SEC23A-213ENST00000557280 KRTAP12-3P60328 96 aa7.46□□□□□ -1.22
SEC23A-213ENST00000557280 LCE3BQ5TA77 95 aa7.42□□□□□ -1.22
SEC23A-213ENST00000557280 MT1GP13640 62 aa7.41□□□□□ -1.22
SEC23A-213ENST00000557280 KRTAP2-2Q9BYT5 123 aa7.38□□□□□ -1.23
SEC23A-213ENST00000557280 KRTAP2-1Q9BYU5 128 aa7.38□□□□□ -1.23
SEC23A-213ENST00000557280 MT1MQ8N339 61 aa7.36□□□□□ -1.23
SEC23A-213ENST00000557280 KRTAP23-1A1A580 65 aa7.33□□□□□ -1.24
SEC23A-213ENST00000557280 PP632Q6XCG6 107 aa7.32□□□□□ -1.24
SEC23A-213ENST00000557280 BRK1Q8WUW1 75 aa7.31□□□□□ -1.24
SEC23A-213ENST00000557280 KRTAP4-3Q9BYR4 195 aa7.24□□□□□ -1.25
SEC23A-213ENST00000557280 KRTAP4-7Q9BYR0 210 aa7.21□□□□□ -1.26
SEC23A-213ENST00000557280 DSTQ03001 7570 aaKnown RBP7.16□□□□□ -1.26
SEC23A-213ENST00000557280 KRTAP15-1Q3LI76 137 aa7.09□□□□□ -1.27
SEC23A-213ENST00000557280 KRTAP19-4Q3LI73 84 aa6.92□□□□□ -1.3
SEC23A-213ENST00000557280 LCE3CQ5T5A8 94 aa6.91□□□□□ -1.3
SEC23A-213ENST00000557280 PMAIP1Q13794 54 aa6.86□□□□□ -1.31
SEC23A-213ENST00000557280 KRTAP4-9Q9BYQ8 210 aa6.84□□□□□ -1.31
SEC23A-213ENST00000557280 LOC100996750A0A140TA64 210 aa6.8□□□□□ -1.32
SEC23A-213ENST00000557280 KRTAP5-4Q6L8H1 288 aa6.77□□□□□ -1.33
SEC23A-213ENST00000557280 LCE4AQ5TA78 99 aa6.76□□□□□ -1.33
SEC23A-213ENST00000557280 GPR98Q8WXG9 6306 aa6.75□□□□□ -1.33
SEC23A-213ENST00000557280 KRTAP5-5Q701N2 237 aaPredicted RBP6.73□□□□□ -1.33
SEC23A-213ENST00000557280 LCE1DQ5T752 114 aa6.72□□□□□ -1.33
SEC23A-213ENST00000557280 MT4P47944 62 aa6.7□□□□□ -1.34
SEC23A-213ENST00000557280 PRO0628Q9UI54 55 aa6.69□□□□□ -1.34
SEC23A-213ENST00000557280 PRAC1Q96KF2 57 aa6.62□□□□□ -1.35
SEC23A-213ENST00000557280 HMCN1Q96RW7 5635 aa6.59□□□□□ -1.35
SEC23A-213ENST00000557280 KRTAP9-6A8MVA2 160 aa6.59□□□□□ -1.35
SEC23A-213ENST00000557280 KRTAP4-6Q9BYQ5 205 aa6.58□□□□□ -1.36
SEC23A-213ENST00000557280 KRTAP20-2Q3LI61 65 aa6.37□□□□□ -1.39
SEC23A-213ENST00000557280 MT1AP04731 61 aa6.36□□□□□ -1.39
SEC23A-213ENST00000557280 KRTAP12-4P60329 112 aa6.36□□□□□ -1.39
SEC23A-213ENST00000557280 KRTAP6-1Q3LI64 71 aa6.34□□□□□ -1.39
SEC23A-213ENST00000557280 SPRR5A0A1B0GTR4 108 aa6.33□□□□□ -1.4
SEC23A-213ENST00000557280 KTN1-AS1Q86SY8 53 aa6.32□□□□□ -1.4
SEC23A-213ENST00000557280 SYNE1Q8NF91 8797 aaKnown RBP6.29□□□□□ -1.4
SEC23A-213ENST00000557280 AHNAK2Q8IVF2 5795 aa6.23□□□□□ -1.41
SEC23A-213ENST00000557280 KRTAP5-3Q6L8H2 238 aa6.17□□□□□ -1.42
SEC23A-213ENST00000557280 KRTAP5-10Q6L8G5 202 aa6.1□□□□□ -1.43
SEC23A-213ENST00000557280 KRTAP9-4Q9BYQ2 154 aa6.09□□□□□ -1.43
SEC23A-213ENST00000557280 KRTAP5-2Q701N4 177 aa6.02□□□□□ -1.45
SEC23A-213ENST00000557280 SVIPQ8NHG7 77 aa6.02□□□□□ -1.45
SEC23A-213ENST00000557280 H3BS24 57 aa5.99□□□□□ -1.45
SEC23A-213ENST00000557280 KRTAP6-2Q3LI66 62 aa5.96□□□□□ -1.46
SEC23A-213ENST00000557280 KRTAP5-7Q6L8G8 165 aa5.9□□□□□ -1.46
SEC23A-213ENST00000557280 MT3P25713 68 aa5.76□□□□□ -1.49
SEC23A-213ENST00000557280 KRTAP4-11Q9BYQ6 195 aa5.7□□□□□ -1.5
SEC23A-213ENST00000557280 KRTAP5-8O75690 187 aa5.52□□□□□ -1.53
SEC23A-213ENST00000557280 OBSCNQ5VST9 7968 aa5.39□□□□□ -1.55
SEC23A-213ENST00000557280 LUZP6Q538Z0 58 aa5.37□□□□□ -1.55
SEC23A-213ENST00000557280 KRTAP5-1Q6L8H4 278 aa5.32□□□□□ -1.56
SEC23A-213ENST00000557280 AHNAKQ09666 5890 aaKnown RBP5.22□□□□□ -1.57
SEC23A-213ENST00000557280 MUC5ACP98088 5654 aa5.19□□□□□ -1.58
SEC23A-213ENST00000557280 LCE1EQ5T753 118 aa5.18□□□□□ -1.58
SEC23A-213ENST00000557280 MUC5BQ9HC84 5762 aaPredicted RBP5.15□□□□□ -1.59
SEC23A-213ENST00000557280 KRTAP9-9Q9BYP9 154 aa5.14□□□□□ -1.59
SEC23A-213ENST00000557280 KRTAP4-12Q9BQ66 201 aa5.04□□□□□ -1.6
SEC23A-213ENST00000557280 LCE3DQ9BYE3 92 aa5.04□□□□□ -1.6
SEC23A-213ENST00000557280 KRTAP4-2Q9BYR5 136 aa4.93□□□□□ -1.62
SEC23A-213ENST00000557280 LCE1BQ5T7P3 118 aa4.9□□□□□ -1.63
SEC23A-213ENST00000557280 LCE1CQ5T751 118 aa4.82□□□□□ -1.64
SEC23A-213ENST00000557280 LCE3EQ5T5B0 92 aa4.8□□□□□ -1.64
SEC23A-213ENST00000557280 NDUFAF8A1L188 74 aa4.78□□□□□ -1.64
SEC23A-213ENST00000557280 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
SEC23A-213ENST00000557280 KRTAP5-11Q6L8G4 156 aa4.34□□□□□ -1.71
SEC23A-213ENST00000557280 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
SEC23A-213ENST00000557280 KRTAP21-2Q3LI59 83 aa4.17□□□□□ -1.74
SEC23A-213ENST00000557280 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
SEC23A-213ENST00000557280 PRM1P04553 51 aa3.88□□□□□ -1.79
SEC23A-213ENST00000557280 INE1O15225 51 aa3.81□□□□□ -1.8
SEC23A-213ENST00000557280 KRTAP4-4Q9BYR3 166 aa3.78□□□□□ -1.8
SEC23A-213ENST00000557280 PHGR1C9JFL3 82 aa3.75□□□□□ -1.81
SEC23A-213ENST00000557280 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
SEC23A-213ENST00000557280 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
SEC23A-213ENST00000557280 MUC16Q8WXI7 14507 aa2.38□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 151 ms