RNA–Protein interactions for RNA: ENST00000556948.1

NBEAP1-202, Transcript of neurobeachin pseudogene 1, humanhuman

TSL 5

Gene NBEAP1, Length 3,036 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBEAP1-202ENST00000556948 KRTAP13-4Q3LI77 160 aa2.12□□□□□ -2.07
NBEAP1-202ENST00000556948 SPRR2GQ9BYE4 73 aa2.1□□□□□ -2.07
NBEAP1-202ENST00000556948 LCE3CQ5T5A8 94 aa2.1□□□□□ -2.07
NBEAP1-202ENST00000556948 KRTAP12-1P59990 96 aa2.06□□□□□ -2.08
NBEAP1-202ENST00000556948 KRTAP19-8Q3LI54 63 aa2.04□□□□□ -2.08
NBEAP1-202ENST00000556948 MT1BP07438 61 aa2.01□□□□□ -2.09
NBEAP1-202ENST00000556948 KRTAP10-12P60413 245 aa2.01□□□□□ -2.09
NBEAP1-202ENST00000556948 LCE1EQ5T753 118 aa2.01□□□□□ -2.09
NBEAP1-202ENST00000556948 KRTAP5-4Q6L8H1 288 aa2.01□□□□□ -2.09
NBEAP1-202ENST00000556948 FSIP2Q5CZC0 6907 aa1.99□□□□□ -2.09
NBEAP1-202ENST00000556948 SPRR5A0A1B0GTR4 108 aa1.98□□□□□ -2.09
NBEAP1-202ENST00000556948 USH2AO75445 5202 aa1.97□□□□□ -2.09
NBEAP1-202ENST00000556948 LCE3EQ5T5B0 92 aa1.96□□□□□ -2.1
NBEAP1-202ENST00000556948 KRTAP10-5P60370 271 aa1.94□□□□□ -2.1
NBEAP1-202ENST00000556948 MT1XP80297 61 aa1.94□□□□□ -2.1
NBEAP1-202ENST00000556948 KRTAP19-6Q3LI70 58 aa1.93□□□□□ -2.1
NBEAP1-202ENST00000556948 TNP1P09430 55 aa1.92□□□□□ -2.1
NBEAP1-202ENST00000556948 SSPOA2VEC9 5147 aa1.9□□□□□ -2.11
NBEAP1-202ENST00000556948 CRCT1Q9UGL9 99 aa1.89□□□□□ -2.11
NBEAP1-202ENST00000556948 KRTAP10-7P60409 375 aaPredicted RBP1.86□□□□□ -2.11
NBEAP1-202ENST00000556948 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
NBEAP1-202ENST00000556948 KRTAP6-3Q3LI67 103 aa1.85□□□□□ -2.11
NBEAP1-202ENST00000556948 FCGBPQ9Y6R7 5405 aaPredicted RBP1.84□□□□□ -2.12
NBEAP1-202ENST00000556948 LCE3AQ5TA76 89 aa1.81□□□□□ -2.12
NBEAP1-202ENST00000556948 LCE3DQ9BYE3 92 aa1.81□□□□□ -2.12
NBEAP1-202ENST00000556948 KRTAP5-2Q701N4 177 aa1.81□□□□□ -2.12
NBEAP1-202ENST00000556948 KMT2DO14686 5537 aa1.8□□□□□ -2.12
NBEAP1-202ENST00000556948 KRTAP8-1Q8IUC2 63 aa1.78□□□□□ -2.12
NBEAP1-202ENST00000556948 MACF1Q9UPN3 7388 aaKnown RBP1.78□□□□□ -2.12
NBEAP1-202ENST00000556948 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
NBEAP1-202ENST00000556948 KRTAP12-3P60328 96 aa1.76□□□□□ -2.13
NBEAP1-202ENST00000556948 KRTAP19-5Q3LI72 72 aa1.75□□□□□ -2.13
NBEAP1-202ENST00000556948 SYNE2Q8WXH0 6885 aaKnown RBP1.75□□□□□ -2.13
NBEAP1-202ENST00000556948 KRTAP4-4Q9BYR3 166 aa1.74□□□□□ -2.13
NBEAP1-202ENST00000556948 KRTAP12-4P60329 112 aa1.74□□□□□ -2.13
NBEAP1-202ENST00000556948 KRTAP19-7Q3SYF9 63 aa1.73□□□□□ -2.13
NBEAP1-202ENST00000556948 SPRR2FQ96RM1 72 aa1.72□□□□□ -2.13
NBEAP1-202ENST00000556948 KRTAP5-1Q6L8H4 278 aa1.71□□□□□ -2.14
NBEAP1-202ENST00000556948 MT1EP04732 61 aa1.7□□□□□ -2.14
NBEAP1-202ENST00000556948 MUC12Q9UKN1 5478 aa1.67□□□□□ -2.14
NBEAP1-202ENST00000556948 MT1LQ93083 61 aa1.66□□□□□ -2.14
NBEAP1-202ENST00000556948 KRTAP19-3Q7Z4W3 81 aa1.66□□□□□ -2.14
NBEAP1-202ENST00000556948 MT1GP13640 62 aa1.65□□□□□ -2.14
NBEAP1-202ENST00000556948 SPRR2EP22531 72 aa1.64□□□□□ -2.15
NBEAP1-202ENST00000556948 SPRR2BP35325 72 aa1.64□□□□□ -2.15
NBEAP1-202ENST00000556948 SPRR2AP35326 72 aa1.64□□□□□ -2.15
NBEAP1-202ENST00000556948 MDN1Q9NU22 5596 aa1.61□□□□□ -2.15
NBEAP1-202ENST00000556948 MT1MQ8N339 61 aa1.61□□□□□ -2.15
NBEAP1-202ENST00000556948 KRTAP5-11Q6L8G4 156 aa1.61□□□□□ -2.15
NBEAP1-202ENST00000556948 SPRR2DP22532 72 aa1.58□□□□□ -2.16
NBEAP1-202ENST00000556948 KRTAP5-5Q701N2 237 aaPredicted RBP1.58□□□□□ -2.16
NBEAP1-202ENST00000556948 DSTQ03001 7570 aaKnown RBP1.57□□□□□ -2.16
NBEAP1-202ENST00000556948 KRTAP4-3Q9BYR4 195 aa1.56□□□□□ -2.16
NBEAP1-202ENST00000556948 AHNAK2Q8IVF2 5795 aa1.56□□□□□ -2.16
NBEAP1-202ENST00000556948 NEBP20929 6669 aa1.55□□□□□ -2.16
NBEAP1-202ENST00000556948 KRTAP9-6A8MVA2 160 aa1.52□□□□□ -2.17
NBEAP1-202ENST00000556948 KRTAP2-3P0C7H8 128 aa1.5□□□□□ -2.17
NBEAP1-202ENST00000556948 KRTAP2-4Q9BYR9 128 aa1.5□□□□□ -2.17
NBEAP1-202ENST00000556948 KRTAP20-1Q3LI63 56 aa1.48□□□□□ -2.17
NBEAP1-202ENST00000556948 KRTAP2-1Q9BYU5 128 aa1.47□□□□□ -2.17
NBEAP1-202ENST00000556948 MT1AP04731 61 aa1.42□□□□□ -2.18
NBEAP1-202ENST00000556948 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
NBEAP1-202ENST00000556948 KRTAP6-1Q3LI64 71 aa1.4□□□□□ -2.19
NBEAP1-202ENST00000556948 MT4P47944 62 aa1.37□□□□□ -2.19
NBEAP1-202ENST00000556948 SYNE1Q8NF91 8797 aaKnown RBP1.37□□□□□ -2.19
NBEAP1-202ENST00000556948 KRTAP20-2Q3LI61 65 aa1.32□□□□□ -2.2
NBEAP1-202ENST00000556948 MUC5ACP98088 5654 aa1.31□□□□□ -2.2
NBEAP1-202ENST00000556948 KRTAP6-2Q3LI66 62 aa1.31□□□□□ -2.2
NBEAP1-202ENST00000556948 PRM1P04553 51 aa1.29□□□□□ -2.2
NBEAP1-202ENST00000556948 LCE1CQ5T751 118 aa1.28□□□□□ -2.2
NBEAP1-202ENST00000556948 LCE1BQ5T7P3 118 aa1.28□□□□□ -2.2
NBEAP1-202ENST00000556948 KRTAP5-7Q6L8G8 165 aa1.26□□□□□ -2.21
NBEAP1-202ENST00000556948 OBSCNQ5VST9 7968 aa1.25□□□□□ -2.21
NBEAP1-202ENST00000556948 KRTAP5-10Q6L8G5 202 aa1.23□□□□□ -2.21
NBEAP1-202ENST00000556948 KRTAP21-2Q3LI59 83 aa0.91□□□□□ -2.26
NBEAP1-202ENST00000556948 KRTAP21-1Q3LI58 79 aa0.85□□□□□ -2.27
NBEAP1-202ENST00000556948 PHGR1C9JFL3 82 aa0.8□□□□□ -2.28
NBEAP1-202ENST00000556948 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 222 ms