RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 LINC01554Q52M75 96 aa2.33□□□□□ -2.04
ATXN3-244ENST00000556898 Q5VV11 94 aa2.33□□□□□ -2.04
ATXN3-244ENST00000556898 SPRR2GQ9BYE4 73 aa2.33□□□□□ -2.04
ATXN3-244ENST00000556898 R4GN34 69 aa2.33□□□□□ -2.04
ATXN3-244ENST00000556898 MUC12Q9UKN1 5478 aa2.32□□□□□ -2.04
ATXN3-244ENST00000556898 CRIPTQ9P021 101 aa2.32□□□□□ -2.04
ATXN3-244ENST00000556898 A0A0D9SG42 100 aa2.31□□□□□ -2.04
ATXN3-244ENST00000556898 MT1BP07438 61 aa2.31□□□□□ -2.04
ATXN3-244ENST00000556898 KRTAP5-5Q701N2 237 aaPredicted RBP2.31□□□□□ -2.04
ATXN3-244ENST00000556898 KRTAP2-3P0C7H8 128 aa2.3□□□□□ -2.04
ATXN3-244ENST00000556898 KRTAP19-8Q3LI54 63 aa2.3□□□□□ -2.04
ATXN3-244ENST00000556898 KRTAP2-4Q9BYR9 128 aa2.3□□□□□ -2.04
ATXN3-244ENST00000556898 A6NN06 94 aa2.26□□□□□ -2.05
ATXN3-244ENST00000556898 UQCR11O14957 56 aa2.26□□□□□ -2.05
ATXN3-244ENST00000556898 MIR22HGQ0VDD5 57 aa2.26□□□□□ -2.05
ATXN3-244ENST00000556898 BRK1Q8WUW1 75 aa2.26□□□□□ -2.05
ATXN3-244ENST00000556898 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
ATXN3-244ENST00000556898 KMT2DO14686 5537 aa2.25□□□□□ -2.05
ATXN3-244ENST00000556898 A6NED7 52 aa2.25□□□□□ -2.05
ATXN3-244ENST00000556898 KRTAP12-1P59990 96 aa2.25□□□□□ -2.05
ATXN3-244ENST00000556898 SPINT4Q6UDR6 99 aa2.25□□□□□ -2.05
ATXN3-244ENST00000556898 PLAC4Q8WY50 150 aa2.23□□□□□ -2.05
ATXN3-244ENST00000556898 MT1XP80297 61 aa2.21□□□□□ -2.06
ATXN3-244ENST00000556898 PMAIP1Q13794 54 aa2.21□□□□□ -2.06
ATXN3-244ENST00000556898 KRTAP2-1Q9BYU5 128 aa2.21□□□□□ -2.06
ATXN3-244ENST00000556898 MDN1Q9NU22 5596 aa2.2□□□□□ -2.06
ATXN3-244ENST00000556898 CDC42SE1Q9NRR8 79 aa2.19□□□□□ -2.06
ATXN3-244ENST00000556898 CAMK2N1Q7Z7J9 78 aa2.18□□□□□ -2.06
ATXN3-244ENST00000556898 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
ATXN3-244ENST00000556898 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
ATXN3-244ENST00000556898 SPRR2EP22531 72 aa2.16□□□□□ -2.06
ATXN3-244ENST00000556898 SPRR2BP35325 72 aa2.16□□□□□ -2.06
ATXN3-244ENST00000556898 SPRR2AP35326 72 aa2.16□□□□□ -2.06
ATXN3-244ENST00000556898 KTN1-AS1Q86SY8 53 aa2.16□□□□□ -2.06
ATXN3-244ENST00000556898 C10orf95Q9H7T3 257 aa2.15□□□□□ -2.07
ATXN3-244ENST00000556898 SPRR2FQ96RM1 72 aa2.14□□□□□ -2.07
ATXN3-244ENST00000556898 PRO2289Q9P1D8 64 aa2.12□□□□□ -2.07
ATXN3-244ENST00000556898 K7ERS5 55 aa2.11□□□□□ -2.07
ATXN3-244ENST00000556898 SPRR2DP22532 72 aa2.1□□□□□ -2.07
ATXN3-244ENST00000556898 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
ATXN3-244ENST00000556898 KRTAP8-1Q8IUC2 63 aa2.07□□□□□ -2.08
ATXN3-244ENST00000556898 ROMO1P60602 79 aa2.06□□□□□ -2.08
ATXN3-244ENST00000556898 TNP1P09430 55 aa2.05□□□□□ -2.08
ATXN3-244ENST00000556898 KRTAP25-1Q3LHN0 102 aa2.01□□□□□ -2.09
ATXN3-244ENST00000556898 KRTAP19-5Q3LI72 72 aa1.98□□□□□ -2.09
ATXN3-244ENST00000556898 KRTAP19-7Q3SYF9 63 aa1.98□□□□□ -2.09
ATXN3-244ENST00000556898 SPRR5A0A1B0GTR4 108 aa1.96□□□□□ -2.1
ATXN3-244ENST00000556898 MT1EP04732 61 aa1.94□□□□□ -2.1
ATXN3-244ENST00000556898 LUZP6Q538Z0 58 aa1.94□□□□□ -2.1
ATXN3-244ENST00000556898 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
ATXN3-244ENST00000556898 KRTAP12-3P60328 96 aa1.92□□□□□ -2.1
ATXN3-244ENST00000556898 LCE3DQ9BYE3 92 aa1.9□□□□□ -2.11
ATXN3-244ENST00000556898 AHNAK2Q8IVF2 5795 aa1.9□□□□□ -2.11
ATXN3-244ENST00000556898 PP632Q6XCG6 107 aa1.89□□□□□ -2.11
ATXN3-244ENST00000556898 DSTQ03001 7570 aaKnown RBP1.88□□□□□ -2.11
ATXN3-244ENST00000556898 KRTAP5-10Q6L8G5 202 aa1.88□□□□□ -2.11
ATXN3-244ENST00000556898 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
ATXN3-244ENST00000556898 MT1LQ93083 61 aa1.88□□□□□ -2.11
ATXN3-244ENST00000556898 KRTAP19-3Q7Z4W3 81 aa1.87□□□□□ -2.11
ATXN3-244ENST00000556898 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
ATXN3-244ENST00000556898 MT4P47944 62 aa1.85□□□□□ -2.11
ATXN3-244ENST00000556898 MT1MQ8N339 61 aa1.84□□□□□ -2.11
ATXN3-244ENST00000556898 MT1GP13640 62 aa1.83□□□□□ -2.12
ATXN3-244ENST00000556898 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
ATXN3-244ENST00000556898 SYNE1Q8NF91 8797 aaKnown RBP1.69□□□□□ -2.14
ATXN3-244ENST00000556898 KRTAP20-2Q3LI61 65 aa1.68□□□□□ -2.14
ATXN3-244ENST00000556898 MUC5BQ9HC84 5762 aaPredicted RBP1.66□□□□□ -2.14
ATXN3-244ENST00000556898 KRTAP12-4P60329 112 aa1.64□□□□□ -2.15
ATXN3-244ENST00000556898 KRTAP6-1Q3LI64 71 aa1.61□□□□□ -2.15
ATXN3-244ENST00000556898 MT1AP04731 61 aa1.6□□□□□ -2.15
ATXN3-244ENST00000556898 MUC5ACP98088 5654 aa1.59□□□□□ -2.15
ATXN3-244ENST00000556898 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
ATXN3-244ENST00000556898 KRTAP6-2Q3LI66 62 aa1.49□□□□□ -2.17
ATXN3-244ENST00000556898 INE1O15225 51 aa1.48□□□□□ -2.17
ATXN3-244ENST00000556898 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
ATXN3-244ENST00000556898 PRM1P04553 51 aa1.1□□□□□ -2.23
ATXN3-244ENST00000556898 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
ATXN3-244ENST00000556898 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 168.1 ms