RNA–Protein interactions for RNA: ENST00000556863.1

CIPC-207, Transcript of CLOCK interacting pacemaker, humanhuman

TSL 3

Gene CIPC, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIPC-207ENST00000556863 BRK1Q8WUW1 75 aa5.44□□□□□ -1.54
CIPC-207ENST00000556863 LCE3AQ5TA76 89 aa5.41□□□□□ -1.54
CIPC-207ENST00000556863 A0A0A0MQY5 61 aa5.38□□□□□ -1.55
CIPC-207ENST00000556863 KRTAP25-1Q3LHN0 102 aa5.38□□□□□ -1.55
CIPC-207ENST00000556863 ROMO1P60602 79 aa5.37□□□□□ -1.55
CIPC-207ENST00000556863 MUC12Q9UKN1 5478 aa5.37□□□□□ -1.55
CIPC-207ENST00000556863 KRTAP19-7Q3SYF9 63 aa5.35□□□□□ -1.55
CIPC-207ENST00000556863 KRTAP19-5Q3LI72 72 aa5.34□□□□□ -1.55
CIPC-207ENST00000556863 MDN1Q9NU22 5596 aa5.31□□□□□ -1.56
CIPC-207ENST00000556863 SPRR2EP22531 72 aa5.3□□□□□ -1.56
CIPC-207ENST00000556863 SPRR2BP35325 72 aa5.3□□□□□ -1.56
CIPC-207ENST00000556863 SPRR2AP35326 72 aa5.3□□□□□ -1.56
CIPC-207ENST00000556863 MT1EP04732 61 aa5.28□□□□□ -1.56
CIPC-207ENST00000556863 LCE1AQ5T7P2 110 aa5.27□□□□□ -1.57
CIPC-207ENST00000556863 NEBP20929 6669 aa5.25□□□□□ -1.57
CIPC-207ENST00000556863 KRTAP19-4Q3LI73 84 aa5.18□□□□□ -1.58
CIPC-207ENST00000556863 KRTAP12-3P60328 96 aa5.17□□□□□ -1.58
CIPC-207ENST00000556863 KRTAP19-3Q7Z4W3 81 aa5.14□□□□□ -1.59
CIPC-207ENST00000556863 SPRR2DP22532 72 aa5.12□□□□□ -1.59
CIPC-207ENST00000556863 MT1LQ93083 61 aa5.12□□□□□ -1.59
CIPC-207ENST00000556863 PMAIP1Q13794 54 aa5.11□□□□□ -1.59
CIPC-207ENST00000556863 PP632Q6XCG6 107 aa5.07□□□□□ -1.6
CIPC-207ENST00000556863 PRO0628Q9UI54 55 aa5.07□□□□□ -1.6
CIPC-207ENST00000556863 MT1GP13640 62 aa5.04□□□□□ -1.6
CIPC-207ENST00000556863 KRTAP20-1Q3LI63 56 aa5.03□□□□□ -1.6
CIPC-207ENST00000556863 MT1MQ8N339 61 aa5.01□□□□□ -1.61
CIPC-207ENST00000556863 KRTAP2-3P0C7H8 128 aa4.97□□□□□ -1.61
CIPC-207ENST00000556863 KRTAP2-4Q9BYR9 128 aa4.97□□□□□ -1.61
CIPC-207ENST00000556863 KRTAP15-1Q3LI76 137 aa4.96□□□□□ -1.62
CIPC-207ENST00000556863 KRTAP4-3Q9BYR4 195 aa4.93□□□□□ -1.62
CIPC-207ENST00000556863 PRAC1Q96KF2 57 aa4.9□□□□□ -1.63
CIPC-207ENST00000556863 KRTAP2-2Q9BYT5 123 aa4.84□□□□□ -1.63
CIPC-207ENST00000556863 KRTAP2-1Q9BYU5 128 aa4.84□□□□□ -1.63
CIPC-207ENST00000556863 LCE3CQ5T5A8 94 aa4.8□□□□□ -1.64
CIPC-207ENST00000556863 KTN1-AS1Q86SY8 53 aa4.77□□□□□ -1.65
CIPC-207ENST00000556863 DSTQ03001 7570 aaKnown RBP4.75□□□□□ -1.65
CIPC-207ENST00000556863 KRTAP9-6A8MVA2 160 aa4.57□□□□□ -1.68
CIPC-207ENST00000556863 KRTAP5-5Q701N2 237 aaPredicted RBP4.54□□□□□ -1.68
CIPC-207ENST00000556863 KRTAP5-4Q6L8H1 288 aa4.52□□□□□ -1.69
CIPC-207ENST00000556863 MT4P47944 62 aa4.46□□□□□ -1.7
CIPC-207ENST00000556863 SPRR5A0A1B0GTR4 108 aa4.36□□□□□ -1.71
CIPC-207ENST00000556863 MT1AP04731 61 aa4.35□□□□□ -1.71
CIPC-207ENST00000556863 HMCN1Q96RW7 5635 aa4.35□□□□□ -1.71
CIPC-207ENST00000556863 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
CIPC-207ENST00000556863 KRTAP12-4P60329 112 aa4.28□□□□□ -1.72
CIPC-207ENST00000556863 SYNE1Q8NF91 8797 aaKnown RBP4.27□□□□□ -1.73
CIPC-207ENST00000556863 KRTAP20-2Q3LI61 65 aa4.26□□□□□ -1.73
CIPC-207ENST00000556863 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
CIPC-207ENST00000556863 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
CIPC-207ENST00000556863 KRTAP6-2Q3LI66 62 aa4.05□□□□□ -1.76
CIPC-207ENST00000556863 KRTAP5-2Q701N4 177 aa4.03□□□□□ -1.76
CIPC-207ENST00000556863 LUZP6Q538Z0 58 aa3.96□□□□□ -1.78
CIPC-207ENST00000556863 KRTAP5-11Q6L8G4 156 aa3.96□□□□□ -1.78
CIPC-207ENST00000556863 MT3P25713 68 aa3.94□□□□□ -1.78
CIPC-207ENST00000556863 NDUFAF8A1L188 74 aa3.93□□□□□ -1.78
CIPC-207ENST00000556863 GPR98Q8WXG9 6306 aa3.92□□□□□ -1.78
CIPC-207ENST00000556863 KRTAP5-10Q6L8G5 202 aa3.92□□□□□ -1.78
CIPC-207ENST00000556863 KRTAP5-7Q6L8G8 165 aa3.69□□□□□ -1.82
CIPC-207ENST00000556863 KRTAP5-8O75690 187 aa3.65□□□□□ -1.83
CIPC-207ENST00000556863 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
CIPC-207ENST00000556863 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
CIPC-207ENST00000556863 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
CIPC-207ENST00000556863 LCE3DQ9BYE3 92 aa3.53□□□□□ -1.84
CIPC-207ENST00000556863 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
CIPC-207ENST00000556863 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
CIPC-207ENST00000556863 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
CIPC-207ENST00000556863 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
CIPC-207ENST00000556863 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
CIPC-207ENST00000556863 MUC5BQ9HC84 5762 aaPredicted RBP3.27□□□□□ -1.89
CIPC-207ENST00000556863 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
CIPC-207ENST00000556863 AHNAKQ09666 5890 aaKnown RBP3.23□□□□□ -1.89
CIPC-207ENST00000556863 INE1O15225 51 aa2.93□□□□□ -1.94
CIPC-207ENST00000556863 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
CIPC-207ENST00000556863 PRM1P04553 51 aa2.79□□□□□ -1.96
CIPC-207ENST00000556863 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
CIPC-207ENST00000556863 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
CIPC-207ENST00000556863 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
CIPC-207ENST00000556863 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 39.6 ms