RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 TNP1P09430 55 aa3.94□□□□□ -1.78
SHMT2-224ENST00000556737 KRTAP19-7Q3SYF9 63 aa3.91□□□□□ -1.78
SHMT2-224ENST00000556737 KRTAP25-1Q3LHN0 102 aa3.9□□□□□ -1.79
SHMT2-224ENST00000556737 LCE3BQ5TA77 95 aa3.9□□□□□ -1.79
SHMT2-224ENST00000556737 MT1EP04732 61 aa3.87□□□□□ -1.79
SHMT2-224ENST00000556737 LCE5AQ5TCM9 118 aa3.84□□□□□ -1.79
SHMT2-224ENST00000556737 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
SHMT2-224ENST00000556737 KRTAP19-3Q7Z4W3 81 aa3.82□□□□□ -1.8
SHMT2-224ENST00000556737 DSTQ03001 7570 aaKnown RBP3.81□□□□□ -1.8
SHMT2-224ENST00000556737 PRAC1Q96KF2 57 aa3.81□□□□□ -1.8
SHMT2-224ENST00000556737 KRTAP19-5Q3LI72 72 aa3.79□□□□□ -1.8
SHMT2-224ENST00000556737 LCE3AQ5TA76 89 aa3.77□□□□□ -1.81
SHMT2-224ENST00000556737 PP632Q6XCG6 107 aa3.74□□□□□ -1.81
SHMT2-224ENST00000556737 SVIPQ8NHG7 77 aa3.72□□□□□ -1.81
SHMT2-224ENST00000556737 KRTAP23-1A1A580 65 aa3.71□□□□□ -1.82
SHMT2-224ENST00000556737 MT1GP13640 62 aa3.7□□□□□ -1.82
SHMT2-224ENST00000556737 MT1LQ93083 61 aa3.69□□□□□ -1.82
SHMT2-224ENST00000556737 MT1MQ8N339 61 aa3.68□□□□□ -1.82
SHMT2-224ENST00000556737 KRTAP4-9Q9BYQ8 210 aa3.63□□□□□ -1.83
SHMT2-224ENST00000556737 AHNAK2Q8IVF2 5795 aa3.63□□□□□ -1.83
SHMT2-224ENST00000556737 KRTAP12-3P60328 96 aa3.62□□□□□ -1.83
SHMT2-224ENST00000556737 HMCN1Q96RW7 5635 aa3.61□□□□□ -1.83
SHMT2-224ENST00000556737 KRTAP4-3Q9BYR4 195 aa3.6□□□□□ -1.83
SHMT2-224ENST00000556737 LCE1DQ5T752 114 aa3.57□□□□□ -1.84
SHMT2-224ENST00000556737 LCE4AQ5TA78 99 aa3.55□□□□□ -1.84
SHMT2-224ENST00000556737 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
SHMT2-224ENST00000556737 KRTAP15-1Q3LI76 137 aa3.51□□□□□ -1.85
SHMT2-224ENST00000556737 KRTAP4-7Q9BYR0 210 aa3.51□□□□□ -1.85
SHMT2-224ENST00000556737 MT4P47944 62 aa3.5□□□□□ -1.85
SHMT2-224ENST00000556737 KRTAP5-10Q6L8G5 202 aa3.49□□□□□ -1.85
SHMT2-224ENST00000556737 KRTAP5-7Q6L8G8 165 aa3.44□□□□□ -1.86
SHMT2-224ENST00000556737 KRTAP4-6Q9BYQ5 205 aa3.43□□□□□ -1.86
SHMT2-224ENST00000556737 KRTAP5-5Q701N2 237 aaPredicted RBP3.4□□□□□ -1.87
SHMT2-224ENST00000556737 KRTAP19-4Q3LI73 84 aa3.35□□□□□ -1.87
SHMT2-224ENST00000556737 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
SHMT2-224ENST00000556737 LOC100996750A0A140TA64 210 aa3.32□□□□□ -1.88
SHMT2-224ENST00000556737 KRTAP20-2Q3LI61 65 aa3.31□□□□□ -1.88
SHMT2-224ENST00000556737 SYNE1Q8NF91 8797 aaKnown RBP3.28□□□□□ -1.88
SHMT2-224ENST00000556737 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
SHMT2-224ENST00000556737 KRTAP5-3Q6L8H2 238 aa3.25□□□□□ -1.89
SHMT2-224ENST00000556737 AHNAKQ09666 5890 aaKnown RBP3.24□□□□□ -1.89
SHMT2-224ENST00000556737 KRTAP12-4P60329 112 aa3.22□□□□□ -1.89
SHMT2-224ENST00000556737 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
SHMT2-224ENST00000556737 MT1AP04731 61 aa3.14□□□□□ -1.91
SHMT2-224ENST00000556737 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
SHMT2-224ENST00000556737 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
SHMT2-224ENST00000556737 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
SHMT2-224ENST00000556737 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
SHMT2-224ENST00000556737 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
SHMT2-224ENST00000556737 KRTAP9-4Q9BYQ2 154 aa3.01□□□□□ -1.93
SHMT2-224ENST00000556737 KRTAP4-11Q9BYQ6 195 aa3□□□□□ -1.93
SHMT2-224ENST00000556737 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
SHMT2-224ENST00000556737 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
SHMT2-224ENST00000556737 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
SHMT2-224ENST00000556737 OBSCNQ5VST9 7968 aa2.88□□□□□ -1.95
SHMT2-224ENST00000556737 MT3P25713 68 aa2.84□□□□□ -1.95
SHMT2-224ENST00000556737 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
SHMT2-224ENST00000556737 KRTAP9-9Q9BYP9 154 aa2.73□□□□□ -1.97
SHMT2-224ENST00000556737 A0A0A0MQY5 61 aa2.63□□□□□ -1.99
SHMT2-224ENST00000556737 LCE1EQ5T753 118 aa2.62□□□□□ -1.99
SHMT2-224ENST00000556737 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
SHMT2-224ENST00000556737 KRTAP4-2Q9BYR5 136 aa2.51□□□□□ -2.01
SHMT2-224ENST00000556737 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
SHMT2-224ENST00000556737 INE1O15225 51 aa2.44□□□□□ -2.02
SHMT2-224ENST00000556737 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
SHMT2-224ENST00000556737 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
SHMT2-224ENST00000556737 H3BS24 57 aa2.43□□□□□ -2.02
SHMT2-224ENST00000556737 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
SHMT2-224ENST00000556737 KRTAP4-12Q9BQ66 201 aa2.24□□□□□ -2.05
SHMT2-224ENST00000556737 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
SHMT2-224ENST00000556737 LCE1FQ5T754 118 aa2.13□□□□□ -2.07
SHMT2-224ENST00000556737 PRM1P04553 51 aa2.09□□□□□ -2.07
SHMT2-224ENST00000556737 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
SHMT2-224ENST00000556737 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
SHMT2-224ENST00000556737 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
SHMT2-224ENST00000556737 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
SHMT2-224ENST00000556737 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
SHMT2-224ENST00000556737 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 132.5 ms