RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 LCE3AQ5TA76 89 aa6.29□□□□□ -1.4
PSEN1-217ENST00000556533 KRTAP2-2Q9BYT5 123 aa6.24□□□□□ -1.41
PSEN1-217ENST00000556533 KRTAP2-1Q9BYU5 128 aa6.24□□□□□ -1.41
PSEN1-217ENST00000556533 LCE3BQ5TA77 95 aa6.23□□□□□ -1.41
PSEN1-217ENST00000556533 KRTAP19-3Q7Z4W3 81 aa6.23□□□□□ -1.41
PSEN1-217ENST00000556533 LCE5AQ5TCM9 118 aa6.2□□□□□ -1.42
PSEN1-217ENST00000556533 KRTAP25-1Q3LHN0 102 aa6.13□□□□□ -1.43
PSEN1-217ENST00000556533 MT1GP13640 62 aa6.11□□□□□ -1.43
PSEN1-217ENST00000556533 MT1LQ93083 61 aa6.09□□□□□ -1.43
PSEN1-217ENST00000556533 PMAIP1Q13794 54 aa6.08□□□□□ -1.44
PSEN1-217ENST00000556533 PP632Q6XCG6 107 aa6.07□□□□□ -1.44
PSEN1-217ENST00000556533 KRTAP12-3P60328 96 aa6.05□□□□□ -1.44
PSEN1-217ENST00000556533 MT1MQ8N339 61 aa6.02□□□□□ -1.45
PSEN1-217ENST00000556533 DSTQ03001 7570 aaKnown RBP5.99□□□□□ -1.45
PSEN1-217ENST00000556533 ROMO1P60602 79 aa5.95□□□□□ -1.46
PSEN1-217ENST00000556533 KRTAP4-3Q9BYR4 195 aa5.92□□□□□ -1.46
PSEN1-217ENST00000556533 KRTAP23-1A1A580 65 aa5.86□□□□□ -1.47
PSEN1-217ENST00000556533 KTN1-AS1Q86SY8 53 aa5.85□□□□□ -1.47
PSEN1-217ENST00000556533 KRTAP4-7Q9BYR0 210 aa5.85□□□□□ -1.47
PSEN1-217ENST00000556533 KRTAP4-9Q9BYQ8 210 aa5.77□□□□□ -1.49
PSEN1-217ENST00000556533 KRTAP15-1Q3LI76 137 aa5.72□□□□□ -1.49
PSEN1-217ENST00000556533 LCE4AQ5TA78 99 aa5.65□□□□□ -1.5
PSEN1-217ENST00000556533 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
PSEN1-217ENST00000556533 PRAC1Q96KF2 57 aa5.64□□□□□ -1.51
PSEN1-217ENST00000556533 MT4P47944 62 aa5.63□□□□□ -1.51
PSEN1-217ENST00000556533 LCE1DQ5T752 114 aa5.62□□□□□ -1.51
PSEN1-217ENST00000556533 LCE3CQ5T5A8 94 aa5.59□□□□□ -1.51
PSEN1-217ENST00000556533 KRTAP5-4Q6L8H1 288 aa5.56□□□□□ -1.52
PSEN1-217ENST00000556533 LOC100996750A0A140TA64 210 aa5.53□□□□□ -1.52
PSEN1-217ENST00000556533 HMCN1Q96RW7 5635 aa5.52□□□□□ -1.53
PSEN1-217ENST00000556533 KRTAP4-6Q9BYQ5 205 aa5.47□□□□□ -1.53
PSEN1-217ENST00000556533 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
PSEN1-217ENST00000556533 GPR98Q8WXG9 6306 aa5.41□□□□□ -1.54
PSEN1-217ENST00000556533 KRTAP12-4P60329 112 aa5.32□□□□□ -1.56
PSEN1-217ENST00000556533 KRTAP20-2Q3LI61 65 aa5.27□□□□□ -1.57
PSEN1-217ENST00000556533 SPRR5A0A1B0GTR4 108 aa5.25□□□□□ -1.57
PSEN1-217ENST00000556533 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
PSEN1-217ENST00000556533 AHNAK2Q8IVF2 5795 aa5.24□□□□□ -1.57
PSEN1-217ENST00000556533 SYNE1Q8NF91 8797 aaKnown RBP5.21□□□□□ -1.58
PSEN1-217ENST00000556533 MT1AP04731 61 aa5.18□□□□□ -1.58
PSEN1-217ENST00000556533 KRTAP6-1Q3LI64 71 aa5.16□□□□□ -1.58
PSEN1-217ENST00000556533 KRTAP5-3Q6L8H2 238 aa5.08□□□□□ -1.6
PSEN1-217ENST00000556533 KRTAP5-10Q6L8G5 202 aa5.07□□□□□ -1.6
PSEN1-217ENST00000556533 KRTAP9-4Q9BYQ2 154 aa5□□□□□ -1.61
PSEN1-217ENST00000556533 KRTAP5-2Q701N4 177 aa4.91□□□□□ -1.62
PSEN1-217ENST00000556533 KRTAP6-2Q3LI66 62 aa4.9□□□□□ -1.63
PSEN1-217ENST00000556533 H3BS24 57 aa4.87□□□□□ -1.63
PSEN1-217ENST00000556533 KRTAP5-7Q6L8G8 165 aa4.84□□□□□ -1.63
PSEN1-217ENST00000556533 KRTAP4-11Q9BYQ6 195 aa4.76□□□□□ -1.65
PSEN1-217ENST00000556533 MT3P25713 68 aa4.75□□□□□ -1.65
PSEN1-217ENST00000556533 LUZP6Q538Z0 58 aa4.72□□□□□ -1.65
PSEN1-217ENST00000556533 KRTAP5-8O75690 187 aa4.58□□□□□ -1.68
PSEN1-217ENST00000556533 OBSCNQ5VST9 7968 aa4.56□□□□□ -1.68
PSEN1-217ENST00000556533 NDUFAF8A1L188 74 aa4.47□□□□□ -1.69
PSEN1-217ENST00000556533 KRTAP5-1Q6L8H4 278 aa4.37□□□□□ -1.71
PSEN1-217ENST00000556533 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
PSEN1-217ENST00000556533 MUC5ACP98088 5654 aa4.3□□□□□ -1.72
PSEN1-217ENST00000556533 AHNAKQ09666 5890 aaKnown RBP4.28□□□□□ -1.72
PSEN1-217ENST00000556533 MUC5BQ9HC84 5762 aaPredicted RBP4.28□□□□□ -1.72
PSEN1-217ENST00000556533 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
PSEN1-217ENST00000556533 A0A0A0MQY5 61 aa4.13□□□□□ -1.75
PSEN1-217ENST00000556533 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.75
PSEN1-217ENST00000556533 LCE3DQ9BYE3 92 aa4.08□□□□□ -1.76
PSEN1-217ENST00000556533 KRTAP4-2Q9BYR5 136 aa4.01□□□□□ -1.77
PSEN1-217ENST00000556533 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
PSEN1-217ENST00000556533 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
PSEN1-217ENST00000556533 INE1O15225 51 aa3.8□□□□□ -1.8
PSEN1-217ENST00000556533 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
PSEN1-217ENST00000556533 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
PSEN1-217ENST00000556533 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
PSEN1-217ENST00000556533 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
PSEN1-217ENST00000556533 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
PSEN1-217ENST00000556533 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
PSEN1-217ENST00000556533 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
PSEN1-217ENST00000556533 PRM1P04553 51 aa3.06□□□□□ -1.92
PSEN1-217ENST00000556533 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
PSEN1-217ENST00000556533 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
PSEN1-217ENST00000556533 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 88.9 ms