RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 MT1EP04732 61 aa7.46□□□□□ -1.22
RCCD1-205ENST00000556333 CDC42SE1Q9NRR8 79 aa7.43□□□□□ -1.22
RCCD1-205ENST00000556333 KRTAP25-1Q3LHN0 102 aa7.41□□□□□ -1.22
RCCD1-205ENST00000556333 KRTAP19-3Q7Z4W3 81 aa7.34□□□□□ -1.23
RCCD1-205ENST00000556333 LCE5AQ5TCM9 118 aa7.29□□□□□ -1.24
RCCD1-205ENST00000556333 DSTQ03001 7570 aaKnown RBP7.27□□□□□ -1.25
RCCD1-205ENST00000556333 ROMO1P60602 79 aa7.23□□□□□ -1.25
RCCD1-205ENST00000556333 KRTAP12-3P60328 96 aa7.22□□□□□ -1.25
RCCD1-205ENST00000556333 MT1GP13640 62 aa7.21□□□□□ -1.26
RCCD1-205ENST00000556333 MT1LQ93083 61 aa7.2□□□□□ -1.26
RCCD1-205ENST00000556333 PP632Q6XCG6 107 aa7.19□□□□□ -1.26
RCCD1-205ENST00000556333 KRTAP4-9Q9BYQ8 210 aa7.16□□□□□ -1.26
RCCD1-205ENST00000556333 KRTAP23-1A1A580 65 aa7.11□□□□□ -1.27
RCCD1-205ENST00000556333 MT1MQ8N339 61 aa7.09□□□□□ -1.27
RCCD1-205ENST00000556333 BRK1Q8WUW1 75 aa7.07□□□□□ -1.28
RCCD1-205ENST00000556333 KRTAP4-3Q9BYR4 195 aa6.93□□□□□ -1.3
RCCD1-205ENST00000556333 LCE1DQ5T752 114 aa6.9□□□□□ -1.3
RCCD1-205ENST00000556333 HMCN1Q96RW7 5635 aa6.89□□□□□ -1.31
RCCD1-205ENST00000556333 KRTAP4-7Q9BYR0 210 aa6.89□□□□□ -1.31
RCCD1-205ENST00000556333 KRTAP15-1Q3LI76 137 aa6.87□□□□□ -1.31
RCCD1-205ENST00000556333 AHNAK2Q8IVF2 5795 aa6.78□□□□□ -1.32
RCCD1-205ENST00000556333 KRTAP19-4Q3LI73 84 aa6.78□□□□□ -1.32
RCCD1-205ENST00000556333 MT4P47944 62 aa6.75□□□□□ -1.33
RCCD1-205ENST00000556333 LCE4AQ5TA78 99 aa6.73□□□□□ -1.33
RCCD1-205ENST00000556333 KRTAP5-10Q6L8G5 202 aa6.73□□□□□ -1.33
RCCD1-205ENST00000556333 LCE3CQ5T5A8 94 aa6.67□□□□□ -1.34
RCCD1-205ENST00000556333 PMAIP1Q13794 54 aa6.66□□□□□ -1.34
RCCD1-205ENST00000556333 KRTAP5-7Q6L8G8 165 aa6.57□□□□□ -1.36
RCCD1-205ENST00000556333 LOC100996750A0A140TA64 210 aa6.52□□□□□ -1.37
RCCD1-205ENST00000556333 KRTAP5-4Q6L8H1 288 aa6.5□□□□□ -1.37
RCCD1-205ENST00000556333 KRTAP4-6Q9BYQ5 205 aa6.49□□□□□ -1.37
RCCD1-205ENST00000556333 KRTAP5-3Q6L8H2 238 aa6.44□□□□□ -1.38
RCCD1-205ENST00000556333 KRTAP5-5Q701N2 237 aaPredicted RBP6.42□□□□□ -1.38
RCCD1-205ENST00000556333 PRO0628Q9UI54 55 aa6.42□□□□□ -1.38
RCCD1-205ENST00000556333 SPRR5A0A1B0GTR4 108 aa6.34□□□□□ -1.39
RCCD1-205ENST00000556333 PRAC1Q96KF2 57 aa6.31□□□□□ -1.4
RCCD1-205ENST00000556333 KRTAP9-6A8MVA2 160 aa6.25□□□□□ -1.41
RCCD1-205ENST00000556333 KRTAP12-4P60329 112 aa6.23□□□□□ -1.41
RCCD1-205ENST00000556333 KRTAP20-2Q3LI61 65 aa6.15□□□□□ -1.42
RCCD1-205ENST00000556333 MT1AP04731 61 aa6.14□□□□□ -1.43
RCCD1-205ENST00000556333 SYNE1Q8NF91 8797 aaKnown RBP6.11□□□□□ -1.43
RCCD1-205ENST00000556333 KRTAP6-1Q3LI64 71 aa6.09□□□□□ -1.43
RCCD1-205ENST00000556333 KTN1-AS1Q86SY8 53 aa6.08□□□□□ -1.44
RCCD1-205ENST00000556333 KRTAP9-4Q9BYQ2 154 aa5.9□□□□□ -1.46
RCCD1-205ENST00000556333 SVIPQ8NHG7 77 aa5.87□□□□□ -1.47
RCCD1-205ENST00000556333 AHNAKQ09666 5890 aaKnown RBP5.86□□□□□ -1.47
RCCD1-205ENST00000556333 KRTAP4-11Q9BYQ6 195 aa5.79□□□□□ -1.48
RCCD1-205ENST00000556333 MUC5ACP98088 5654 aa5.77□□□□□ -1.49
RCCD1-205ENST00000556333 KRTAP6-2Q3LI66 62 aa5.75□□□□□ -1.49
RCCD1-205ENST00000556333 KRTAP5-2Q701N4 177 aa5.75□□□□□ -1.49
RCCD1-205ENST00000556333 MUC5BQ9HC84 5762 aaPredicted RBP5.73□□□□□ -1.49
RCCD1-205ENST00000556333 KRTAP5-8O75690 187 aa5.61□□□□□ -1.51
RCCD1-205ENST00000556333 MT3P25713 68 aa5.61□□□□□ -1.51
RCCD1-205ENST00000556333 KRTAP9-9Q9BYP9 154 aa5.46□□□□□ -1.54
RCCD1-205ENST00000556333 OBSCNQ5VST9 7968 aa5.42□□□□□ -1.54
RCCD1-205ENST00000556333 LUZP6Q538Z0 58 aa5.31□□□□□ -1.56
RCCD1-205ENST00000556333 KRTAP5-1Q6L8H4 278 aa5.1□□□□□ -1.59
RCCD1-205ENST00000556333 LCE1EQ5T753 118 aa5.01□□□□□ -1.61
RCCD1-205ENST00000556333 LCE3DQ9BYE3 92 aa4.9□□□□□ -1.63
RCCD1-205ENST00000556333 LCE1BQ5T7P3 118 aa4.78□□□□□ -1.64
RCCD1-205ENST00000556333 KRTAP4-2Q9BYR5 136 aa4.71□□□□□ -1.66
RCCD1-205ENST00000556333 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
RCCD1-205ENST00000556333 LCE1CQ5T751 118 aa4.66□□□□□ -1.66
RCCD1-205ENST00000556333 NDUFAF8A1L188 74 aa4.59□□□□□ -1.67
RCCD1-205ENST00000556333 H3BS24 57 aa4.36□□□□□ -1.71
RCCD1-205ENST00000556333 KRTAP4-12Q9BQ66 201 aa4.29□□□□□ -1.72
RCCD1-205ENST00000556333 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.26□□□□□ -1.73
RCCD1-205ENST00000556333 KRTAP5-11Q6L8G4 156 aa4.18□□□□□ -1.74
RCCD1-205ENST00000556333 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
RCCD1-205ENST00000556333 KRTAP21-2Q3LI59 83 aa3.98□□□□□ -1.77
RCCD1-205ENST00000556333 PHGR1C9JFL3 82 aa3.97□□□□□ -1.77
RCCD1-205ENST00000556333 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
RCCD1-205ENST00000556333 PRM1P04553 51 aa3.73□□□□□ -1.81
RCCD1-205ENST00000556333 INE1O15225 51 aa3.72□□□□□ -1.81
RCCD1-205ENST00000556333 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.83
RCCD1-205ENST00000556333 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
RCCD1-205ENST00000556333 KRTAP21-1Q3LI58 79 aa3.03□□□□□ -1.92
RCCD1-205ENST00000556333 MUC16Q8WXI7 14507 aa2.38□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 111.3 ms