RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 KRTAP8-1Q8IUC2 63 aa3.01□□□□□ -1.93
TDP1-214ENST00000556063 C10orf95Q9H7T3 257 aa3□□□□□ -1.93
TDP1-214ENST00000556063 KRTAP5-9P26371 169 aa2.99□□□□□ -1.93
TDP1-214ENST00000556063 PMAIP1Q13794 54 aa2.98□□□□□ -1.93
TDP1-214ENST00000556063 KRTAP25-1Q3LHN0 102 aa2.95□□□□□ -1.94
TDP1-214ENST00000556063 PRAC1Q96KF2 57 aa2.95□□□□□ -1.94
TDP1-214ENST00000556063 SPRR2FQ96RM1 72 aa2.94□□□□□ -1.94
TDP1-214ENST00000556063 BRK1Q8WUW1 75 aa2.93□□□□□ -1.94
TDP1-214ENST00000556063 NEBP20929 6669 aa2.92□□□□□ -1.94
TDP1-214ENST00000556063 ROMO1P60602 79 aa2.91□□□□□ -1.94
TDP1-214ENST00000556063 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
TDP1-214ENST00000556063 KRTAP15-1Q3LI76 137 aa2.89□□□□□ -1.95
TDP1-214ENST00000556063 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
TDP1-214ENST00000556063 LCE3AQ5TA76 89 aa2.87□□□□□ -1.95
TDP1-214ENST00000556063 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
TDP1-214ENST00000556063 MUC12Q9UKN1 5478 aa2.86□□□□□ -1.95
TDP1-214ENST00000556063 SPRR2EP22531 72 aa2.85□□□□□ -1.95
TDP1-214ENST00000556063 SPRR2BP35325 72 aa2.85□□□□□ -1.95
TDP1-214ENST00000556063 SPRR2AP35326 72 aa2.85□□□□□ -1.95
TDP1-214ENST00000556063 KRTAP19-5Q3LI72 72 aa2.83□□□□□ -1.96
TDP1-214ENST00000556063 KRTAP19-7Q3SYF9 63 aa2.83□□□□□ -1.96
TDP1-214ENST00000556063 MDN1Q9NU22 5596 aa2.83□□□□□ -1.96
TDP1-214ENST00000556063 KMT2DO14686 5537 aa2.82□□□□□ -1.96
TDP1-214ENST00000556063 LCE1AQ5T7P2 110 aa2.82□□□□□ -1.96
TDP1-214ENST00000556063 MT1EP04732 61 aa2.81□□□□□ -1.96
TDP1-214ENST00000556063 PP632Q6XCG6 107 aa2.81□□□□□ -1.96
TDP1-214ENST00000556063 KRTAP12-3P60328 96 aa2.79□□□□□ -1.96
TDP1-214ENST00000556063 KRTAP19-3Q7Z4W3 81 aa2.77□□□□□ -1.97
TDP1-214ENST00000556063 SPRR2DP22532 72 aa2.75□□□□□ -1.97
TDP1-214ENST00000556063 MT1GP13640 62 aa2.74□□□□□ -1.97
TDP1-214ENST00000556063 MT1LQ93083 61 aa2.73□□□□□ -1.97
TDP1-214ENST00000556063 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
TDP1-214ENST00000556063 KTN1-AS1Q86SY8 53 aa2.72□□□□□ -1.97
TDP1-214ENST00000556063 KRTAP2-3P0C7H8 128 aa2.71□□□□□ -1.98
TDP1-214ENST00000556063 KRTAP2-4Q9BYR9 128 aa2.71□□□□□ -1.98
TDP1-214ENST00000556063 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
TDP1-214ENST00000556063 MT1MQ8N339 61 aa2.66□□□□□ -1.98
TDP1-214ENST00000556063 LUZP6Q538Z0 58 aa2.65□□□□□ -1.99
TDP1-214ENST00000556063 NDUFAF8A1L188 74 aa2.64□□□□□ -1.99
TDP1-214ENST00000556063 KRTAP2-2Q9BYT5 123 aa2.64□□□□□ -1.99
TDP1-214ENST00000556063 KRTAP2-1Q9BYU5 128 aa2.64□□□□□ -1.99
TDP1-214ENST00000556063 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
TDP1-214ENST00000556063 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
TDP1-214ENST00000556063 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
TDP1-214ENST00000556063 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
TDP1-214ENST00000556063 DSTQ03001 7570 aaKnown RBP2.47□□□□□ -2.01
TDP1-214ENST00000556063 OBSCNQ5VST9 7968 aa2.42□□□□□ -2.02
TDP1-214ENST00000556063 KRTAP5-5Q701N2 237 aaPredicted RBP2.4□□□□□ -2.03
TDP1-214ENST00000556063 MT4P47944 62 aa2.38□□□□□ -2.03
TDP1-214ENST00000556063 KRTAP9-6A8MVA2 160 aa2.37□□□□□ -2.03
TDP1-214ENST00000556063 KRTAP12-4P60329 112 aa2.36□□□□□ -2.03
TDP1-214ENST00000556063 MT1AP04731 61 aa2.34□□□□□ -2.03
TDP1-214ENST00000556063 HMCN1Q96RW7 5635 aa2.34□□□□□ -2.03
TDP1-214ENST00000556063 SPRR5A0A1B0GTR4 108 aa2.33□□□□□ -2.04
TDP1-214ENST00000556063 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
TDP1-214ENST00000556063 KRTAP6-1Q3LI64 71 aa2.28□□□□□ -2.04
TDP1-214ENST00000556063 KRTAP20-2Q3LI61 65 aa2.27□□□□□ -2.05
TDP1-214ENST00000556063 MT3P25713 68 aa2.24□□□□□ -2.05
TDP1-214ENST00000556063 SYNE1Q8NF91 8797 aaKnown RBP2.22□□□□□ -2.05
TDP1-214ENST00000556063 KRTAP5-10Q6L8G5 202 aa2.18□□□□□ -2.06
TDP1-214ENST00000556063 KRTAP5-8O75690 187 aa2.16□□□□□ -2.06
TDP1-214ENST00000556063 KRTAP6-2Q3LI66 62 aa2.15□□□□□ -2.07
TDP1-214ENST00000556063 KRTAP5-7Q6L8G8 165 aa2.14□□□□□ -2.07
TDP1-214ENST00000556063 INE1O15225 51 aa2.03□□□□□ -2.08
TDP1-214ENST00000556063 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
TDP1-214ENST00000556063 LCE1FQ5T754 118 aa1.97□□□□□ -2.09
TDP1-214ENST00000556063 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
TDP1-214ENST00000556063 MUC5ACP98088 5654 aa1.93□□□□□ -2.1
TDP1-214ENST00000556063 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
TDP1-214ENST00000556063 LCE3EQ5T5B0 92 aa1.84□□□□□ -2.11
TDP1-214ENST00000556063 LCE1BQ5T7P3 118 aa1.78□□□□□ -2.12
TDP1-214ENST00000556063 LCE1CQ5T751 118 aa1.77□□□□□ -2.13
TDP1-214ENST00000556063 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
TDP1-214ENST00000556063 PRM1P04553 51 aa1.48□□□□□ -2.17
TDP1-214ENST00000556063 MUC19Q7Z5P9 8384 aa1.46□□□□□ -2.18
TDP1-214ENST00000556063 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
TDP1-214ENST00000556063 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
TDP1-214ENST00000556063 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 103.3 ms