RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 UQCR11O14957 56 aa3.31□□□□□ -1.88
SUPT16H-204ENST00000555943 KRTAP13-4Q3LI77 160 aa3.31□□□□□ -1.88
SUPT16H-204ENST00000555943 A0A0D9SG42 100 aa3.3□□□□□ -1.88
SUPT16H-204ENST00000555943 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
SUPT16H-204ENST00000555943 MT1BP07438 61 aa3.28□□□□□ -1.88
SUPT16H-204ENST00000555943 A6NN06 94 aa3.27□□□□□ -1.89
SUPT16H-204ENST00000555943 MIR22HGQ0VDD5 57 aa3.26□□□□□ -1.89
SUPT16H-204ENST00000555943 A6NED7 52 aa3.25□□□□□ -1.89
SUPT16H-204ENST00000555943 SPINT4Q6UDR6 99 aa3.25□□□□□ -1.89
SUPT16H-204ENST00000555943 PRO2289Q9P1D8 64 aa3.21□□□□□ -1.9
SUPT16H-204ENST00000555943 KRTAP12-1P59990 96 aa3.2□□□□□ -1.9
SUPT16H-204ENST00000555943 MUC12Q9UKN1 5478 aa3.19□□□□□ -1.9
SUPT16H-204ENST00000555943 K7ERS5 55 aa3.19□□□□□ -1.9
SUPT16H-204ENST00000555943 MT1XP80297 61 aa3.15□□□□□ -1.91
SUPT16H-204ENST00000555943 CDC42SE1Q9NRR8 79 aa3.14□□□□□ -1.91
SUPT16H-204ENST00000555943 KRTAP2-3P0C7H8 128 aa3.12□□□□□ -1.91
SUPT16H-204ENST00000555943 KRTAP2-4Q9BYR9 128 aa3.12□□□□□ -1.91
SUPT16H-204ENST00000555943 KMT2DO14686 5537 aa3.11□□□□□ -1.91
SUPT16H-204ENST00000555943 LCE3AQ5TA76 89 aa3.11□□□□□ -1.91
SUPT16H-204ENST00000555943 MDN1Q9NU22 5596 aa3.11□□□□□ -1.91
SUPT16H-204ENST00000555943 BRK1Q8WUW1 75 aa3.09□□□□□ -1.91
SUPT16H-204ENST00000555943 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
SUPT16H-204ENST00000555943 C10orf95Q9H7T3 257 aa3.03□□□□□ -1.92
SUPT16H-204ENST00000555943 TNP1P09430 55 aa3.02□□□□□ -1.93
SUPT16H-204ENST00000555943 SPRR2EP22531 72 aa3.02□□□□□ -1.93
SUPT16H-204ENST00000555943 SPRR2BP35325 72 aa3.02□□□□□ -1.93
SUPT16H-204ENST00000555943 SPRR2AP35326 72 aa3.02□□□□□ -1.93
SUPT16H-204ENST00000555943 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
SUPT16H-204ENST00000555943 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
SUPT16H-204ENST00000555943 SPRR2FQ96RM1 72 aa2.99□□□□□ -1.93
SUPT16H-204ENST00000555943 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
SUPT16H-204ENST00000555943 ROMO1P60602 79 aa2.98□□□□□ -1.93
SUPT16H-204ENST00000555943 KRTAP4-3Q9BYR4 195 aa2.98□□□□□ -1.93
SUPT16H-204ENST00000555943 KRTAP25-1Q3LHN0 102 aa2.97□□□□□ -1.93
SUPT16H-204ENST00000555943 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
SUPT16H-204ENST00000555943 KRTAP8-1Q8IUC2 63 aa2.97□□□□□ -1.93
SUPT16H-204ENST00000555943 SPRR2DP22532 72 aa2.92□□□□□ -1.94
SUPT16H-204ENST00000555943 PMAIP1Q13794 54 aa2.92□□□□□ -1.94
SUPT16H-204ENST00000555943 PRO0628Q9UI54 55 aa2.92□□□□□ -1.94
SUPT16H-204ENST00000555943 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
SUPT16H-204ENST00000555943 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
SUPT16H-204ENST00000555943 PP632Q6XCG6 107 aa2.84□□□□□ -1.95
SUPT16H-204ENST00000555943 KRTAP19-5Q3LI72 72 aa2.82□□□□□ -1.96
SUPT16H-204ENST00000555943 KRTAP12-3P60328 96 aa2.79□□□□□ -1.96
SUPT16H-204ENST00000555943 KRTAP19-7Q3SYF9 63 aa2.79□□□□□ -1.96
SUPT16H-204ENST00000555943 MT1EP04732 61 aa2.77□□□□□ -1.97
SUPT16H-204ENST00000555943 KTN1-AS1Q86SY8 53 aa2.73□□□□□ -1.97
SUPT16H-204ENST00000555943 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
SUPT16H-204ENST00000555943 KRTAP19-3Q7Z4W3 81 aa2.71□□□□□ -1.98
SUPT16H-204ENST00000555943 DSTQ03001 7570 aaKnown RBP2.7□□□□□ -1.98
SUPT16H-204ENST00000555943 MT1GP13640 62 aa2.69□□□□□ -1.98
SUPT16H-204ENST00000555943 MT1LQ93083 61 aa2.69□□□□□ -1.98
SUPT16H-204ENST00000555943 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
SUPT16H-204ENST00000555943 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
SUPT16H-204ENST00000555943 MT1MQ8N339 61 aa2.62□□□□□ -1.99
SUPT16H-204ENST00000555943 HMCN1Q96RW7 5635 aa2.61□□□□□ -1.99
SUPT16H-204ENST00000555943 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -1.99
SUPT16H-204ENST00000555943 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
SUPT16H-204ENST00000555943 MT4P47944 62 aa2.57□□□□□ -2
SUPT16H-204ENST00000555943 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
SUPT16H-204ENST00000555943 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
SUPT16H-204ENST00000555943 KRTAP12-4P60329 112 aa2.34□□□□□ -2.03
SUPT16H-204ENST00000555943 KRTAP20-2Q3LI61 65 aa2.34□□□□□ -2.03
SUPT16H-204ENST00000555943 SYNE1Q8NF91 8797 aaKnown RBP2.31□□□□□ -2.04
SUPT16H-204ENST00000555943 MT1AP04731 61 aa2.3□□□□□ -2.04
SUPT16H-204ENST00000555943 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
SUPT16H-204ENST00000555943 KRTAP6-1Q3LI64 71 aa2.27□□□□□ -2.05
SUPT16H-204ENST00000555943 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
SUPT16H-204ENST00000555943 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
SUPT16H-204ENST00000555943 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
SUPT16H-204ENST00000555943 KRTAP6-2Q3LI66 62 aa2.13□□□□□ -2.07
SUPT16H-204ENST00000555943 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
SUPT16H-204ENST00000555943 INE1O15225 51 aa1.83□□□□□ -2.12
SUPT16H-204ENST00000555943 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
SUPT16H-204ENST00000555943 PRM1P04553 51 aa1.53□□□□□ -2.16
SUPT16H-204ENST00000555943 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
SUPT16H-204ENST00000555943 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 72 ms