RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 CDC42SE1Q9NRR8 79 aa4.87□□□□□ -1.63
MTHFD1-211ENST00000555709 A0A0A0MQY5 61 aa4.85□□□□□ -1.63
MTHFD1-211ENST00000555709 CAMK2N1Q7Z7J9 78 aa4.85□□□□□ -1.63
MTHFD1-211ENST00000555709 PRO2289Q9P1D8 64 aa4.83□□□□□ -1.64
MTHFD1-211ENST00000555709 DSTQ03001 7570 aaKnown RBP4.82□□□□□ -1.64
MTHFD1-211ENST00000555709 KRTAP4-9Q9BYQ8 210 aa4.81□□□□□ -1.64
MTHFD1-211ENST00000555709 K7ERS5 55 aa4.77□□□□□ -1.65
MTHFD1-211ENST00000555709 BRK1Q8WUW1 75 aa4.74□□□□□ -1.65
MTHFD1-211ENST00000555709 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
MTHFD1-211ENST00000555709 C10orf95Q9H7T3 257 aa4.71□□□□□ -1.66
MTHFD1-211ENST00000555709 KRTAP8-1Q8IUC2 63 aa4.7□□□□□ -1.66
MTHFD1-211ENST00000555709 KRTAP10-7P60409 375 aaPredicted RBP4.67□□□□□ -1.66
MTHFD1-211ENST00000555709 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
MTHFD1-211ENST00000555709 KRTAP10-12P60413 245 aa4.65□□□□□ -1.67
MTHFD1-211ENST00000555709 KRTAP4-11Q9BYQ6 195 aa4.64□□□□□ -1.67
MTHFD1-211ENST00000555709 LCE5AQ5TCM9 118 aa4.61□□□□□ -1.67
MTHFD1-211ENST00000555709 AHNAK2Q8IVF2 5795 aa4.6□□□□□ -1.67
MTHFD1-211ENST00000555709 TNP1P09430 55 aa4.58□□□□□ -1.68
MTHFD1-211ENST00000555709 ROMO1P60602 79 aa4.57□□□□□ -1.68
MTHFD1-211ENST00000555709 HMCN1Q96RW7 5635 aa4.57□□□□□ -1.68
MTHFD1-211ENST00000555709 KRTAP5-10Q6L8G5 202 aa4.55□□□□□ -1.68
MTHFD1-211ENST00000555709 KRTAP25-1Q3LHN0 102 aa4.54□□□□□ -1.68
MTHFD1-211ENST00000555709 PRO0628Q9UI54 55 aa4.53□□□□□ -1.68
MTHFD1-211ENST00000555709 PMAIP1Q13794 54 aa4.46□□□□□ -1.7
MTHFD1-211ENST00000555709 LCE3AQ5TA76 89 aa4.45□□□□□ -1.7
MTHFD1-211ENST00000555709 KRTAP5-7Q6L8G8 165 aa4.45□□□□□ -1.7
MTHFD1-211ENST00000555709 KRTAP19-7Q3SYF9 63 aa4.38□□□□□ -1.71
MTHFD1-211ENST00000555709 KRTAP15-1Q3LI76 137 aa4.36□□□□□ -1.71
MTHFD1-211ENST00000555709 KRTAP19-5Q3LI72 72 aa4.35□□□□□ -1.71
MTHFD1-211ENST00000555709 MT4P47944 62 aa4.33□□□□□ -1.72
MTHFD1-211ENST00000555709 PP632Q6XCG6 107 aa4.32□□□□□ -1.72
MTHFD1-211ENST00000555709 MT1EP04732 61 aa4.31□□□□□ -1.72
MTHFD1-211ENST00000555709 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
MTHFD1-211ENST00000555709 KRTAP12-3P60328 96 aa4.28□□□□□ -1.72
MTHFD1-211ENST00000555709 KRTAP5-3Q6L8H2 238 aa4.27□□□□□ -1.73
MTHFD1-211ENST00000555709 PRAC1Q96KF2 57 aa4.24□□□□□ -1.73
MTHFD1-211ENST00000555709 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
MTHFD1-211ENST00000555709 KRTAP19-3Q7Z4W3 81 aa4.18□□□□□ -1.74
MTHFD1-211ENST00000555709 MT1LQ93083 61 aa4.18□□□□□ -1.74
MTHFD1-211ENST00000555709 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
MTHFD1-211ENST00000555709 MT1GP13640 62 aa4.1□□□□□ -1.75
MTHFD1-211ENST00000555709 MT1MQ8N339 61 aa4.07□□□□□ -1.76
MTHFD1-211ENST00000555709 AHNAKQ09666 5890 aaKnown RBP4.05□□□□□ -1.76
MTHFD1-211ENST00000555709 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
MTHFD1-211ENST00000555709 KRTAP4-3Q9BYR4 195 aa3.96□□□□□ -1.78
MTHFD1-211ENST00000555709 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
MTHFD1-211ENST00000555709 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
MTHFD1-211ENST00000555709 MUC5BQ9HC84 5762 aaPredicted RBP3.85□□□□□ -1.79
MTHFD1-211ENST00000555709 KRTAP9-6A8MVA2 160 aa3.78□□□□□ -1.8
MTHFD1-211ENST00000555709 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
MTHFD1-211ENST00000555709 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
MTHFD1-211ENST00000555709 SYNE1Q8NF91 8797 aaKnown RBP3.7□□□□□ -1.82
MTHFD1-211ENST00000555709 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
MTHFD1-211ENST00000555709 KRTAP12-4P60329 112 aa3.65□□□□□ -1.83
MTHFD1-211ENST00000555709 MT1AP04731 61 aa3.57□□□□□ -1.84
MTHFD1-211ENST00000555709 MT3P25713 68 aa3.54□□□□□ -1.84
MTHFD1-211ENST00000555709 KRTAP6-1Q3LI64 71 aa3.52□□□□□ -1.85
MTHFD1-211ENST00000555709 KRTAP5-2Q701N4 177 aa3.5□□□□□ -1.85
MTHFD1-211ENST00000555709 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
MTHFD1-211ENST00000555709 LUZP6Q538Z0 58 aa3.44□□□□□ -1.86
MTHFD1-211ENST00000555709 KRTAP6-2Q3LI66 62 aa3.27□□□□□ -1.89
MTHFD1-211ENST00000555709 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
MTHFD1-211ENST00000555709 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
MTHFD1-211ENST00000555709 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
MTHFD1-211ENST00000555709 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
MTHFD1-211ENST00000555709 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
MTHFD1-211ENST00000555709 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
MTHFD1-211ENST00000555709 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
MTHFD1-211ENST00000555709 LCE1BQ5T7P3 118 aa2.71□□□□□ -1.98
MTHFD1-211ENST00000555709 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
MTHFD1-211ENST00000555709 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
MTHFD1-211ENST00000555709 INE1O15225 51 aa2.65□□□□□ -1.99
MTHFD1-211ENST00000555709 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
MTHFD1-211ENST00000555709 PRM1P04553 51 aa2.37□□□□□ -2.03
MTHFD1-211ENST00000555709 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
MTHFD1-211ENST00000555709 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
MTHFD1-211ENST00000555709 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
MTHFD1-211ENST00000555709 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 101 ms