RNA–Protein interactions for RNA: ENST00000555370.5

IFT43-210, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-210ENST00000555370 LCE1AQ5T7P2 110 aa4.68□□□□□ -1.66
IFT43-210ENST00000555370 KRTAP4-9Q9BYQ8 210 aa4.68□□□□□ -1.66
IFT43-210ENST00000555370 SPRR5A0A1B0GTR4 108 aa4.64□□□□□ -1.67
IFT43-210ENST00000555370 PRAC1Q96KF2 57 aa4.64□□□□□ -1.67
IFT43-210ENST00000555370 KRTAP5-10Q6L8G5 202 aa4.61□□□□□ -1.67
IFT43-210ENST00000555370 KRTAP10-7P60409 375 aaPredicted RBP4.6□□□□□ -1.67
IFT43-210ENST00000555370 HMCN1Q96RW7 5635 aa4.59□□□□□ -1.68
IFT43-210ENST00000555370 KRTAP10-12P60413 245 aa4.57□□□□□ -1.68
IFT43-210ENST00000555370 KRTAP5-7Q6L8G8 165 aa4.57□□□□□ -1.68
IFT43-210ENST00000555370 KRTAP23-1A1A580 65 aa4.55□□□□□ -1.68
IFT43-210ENST00000555370 PP632Q6XCG6 107 aa4.53□□□□□ -1.68
IFT43-210ENST00000555370 LCE3AQ5TA76 89 aa4.51□□□□□ -1.69
IFT43-210ENST00000555370 SVIPQ8NHG7 77 aa4.46□□□□□ -1.7
IFT43-210ENST00000555370 KRTAP4-8A0A0G2JLE6 195 aa4.42□□□□□ -1.7
IFT43-210ENST00000555370 LCE1DQ5T752 114 aa4.42□□□□□ -1.7
IFT43-210ENST00000555370 KRTAP8-1Q8IUC2 63 aa4.42□□□□□ -1.7
IFT43-210ENST00000555370 KRTAP4-8Q9BYQ9 185 aa4.42□□□□□ -1.7
IFT43-210ENST00000555370 KRTAP12-3P60328 96 aa4.33□□□□□ -1.72
IFT43-210ENST00000555370 KRTAP19-5Q3LI72 72 aa4.33□□□□□ -1.72
IFT43-210ENST00000555370 KRTAP19-7Q3SYF9 63 aa4.29□□□□□ -1.72
IFT43-210ENST00000555370 MT4P47944 62 aa4.26□□□□□ -1.73
IFT43-210ENST00000555370 KRTAP5-3Q6L8H2 238 aa4.26□□□□□ -1.73
IFT43-210ENST00000555370 AHNAKQ09666 5890 aaKnown RBP4.24□□□□□ -1.73
IFT43-210ENST00000555370 MT1EP04732 61 aa4.23□□□□□ -1.73
IFT43-210ENST00000555370 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
IFT43-210ENST00000555370 MT1LQ93083 61 aa4.13□□□□□ -1.75
IFT43-210ENST00000555370 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
IFT43-210ENST00000555370 LCE4AQ5TA78 99 aa4.09□□□□□ -1.75
IFT43-210ENST00000555370 KRTAP19-3Q7Z4W3 81 aa4.08□□□□□ -1.76
IFT43-210ENST00000555370 MUC5BQ9HC84 5762 aaPredicted RBP4.04□□□□□ -1.76
IFT43-210ENST00000555370 MT1GP13640 62 aa4.04□□□□□ -1.76
IFT43-210ENST00000555370 LCE3CQ5T5A8 94 aa4.04□□□□□ -1.76
IFT43-210ENST00000555370 MUC5ACP98088 5654 aa4.04□□□□□ -1.76
IFT43-210ENST00000555370 LCE5AQ5TCM9 118 aa4.01□□□□□ -1.77
IFT43-210ENST00000555370 KRTAP4-6Q9BYQ5 205 aa4.01□□□□□ -1.77
IFT43-210ENST00000555370 MT1MQ8N339 61 aa4□□□□□ -1.77
IFT43-210ENST00000555370 KRTAP4-7Q9BYR0 210 aa3.96□□□□□ -1.78
IFT43-210ENST00000555370 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
IFT43-210ENST00000555370 KRTAP5-4Q6L8H1 288 aa3.82□□□□□ -1.8
IFT43-210ENST00000555370 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
IFT43-210ENST00000555370 LUZP6Q538Z0 58 aa3.8□□□□□ -1.8
IFT43-210ENST00000555370 LOC100996750A0A140TA64 210 aa3.76□□□□□ -1.81
IFT43-210ENST00000555370 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
IFT43-210ENST00000555370 KRTAP5-8O75690 187 aa3.65□□□□□ -1.83
IFT43-210ENST00000555370 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
IFT43-210ENST00000555370 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
IFT43-210ENST00000555370 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
IFT43-210ENST00000555370 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
IFT43-210ENST00000555370 MT1AP04731 61 aa3.53□□□□□ -1.84
IFT43-210ENST00000555370 KRTAP6-1Q3LI64 71 aa3.48□□□□□ -1.85
IFT43-210ENST00000555370 SYNE1Q8NF91 8797 aaKnown RBP3.44□□□□□ -1.86
IFT43-210ENST00000555370 KRTAP12-4P60329 112 aa3.39□□□□□ -1.87
IFT43-210ENST00000555370 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
IFT43-210ENST00000555370 KRTAP9-4Q9BYQ2 154 aa3.35□□□□□ -1.87
IFT43-210ENST00000555370 KRTAP4-12Q9BQ66 201 aa3.34□□□□□ -1.87
IFT43-210ENST00000555370 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
IFT43-210ENST00000555370 A0A0A0MQY5 61 aa3.21□□□□□ -1.9
IFT43-210ENST00000555370 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.9
IFT43-210ENST00000555370 MT3P25713 68 aa3.2□□□□□ -1.9
IFT43-210ENST00000555370 H3BS24 57 aa3.06□□□□□ -1.92
IFT43-210ENST00000555370 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
IFT43-210ENST00000555370 INE1O15225 51 aa3.03□□□□□ -1.92
IFT43-210ENST00000555370 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
IFT43-210ENST00000555370 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
IFT43-210ENST00000555370 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
IFT43-210ENST00000555370 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
IFT43-210ENST00000555370 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
IFT43-210ENST00000555370 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
IFT43-210ENST00000555370 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
IFT43-210ENST00000555370 PRM1P04553 51 aa2.52□□□□□ -2.01
IFT43-210ENST00000555370 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
IFT43-210ENST00000555370 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
IFT43-210ENST00000555370 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
IFT43-210ENST00000555370 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
IFT43-210ENST00000555370 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
IFT43-210ENST00000555370 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
IFT43-210ENST00000555370 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
IFT43-210ENST00000555370 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 60.3 ms