RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 NDUFC1O43677 76 aa1.29□□□□□ -2.2
CKS1BP1-201ENST00000555221 CYP4F30PQ9H0H9 118 aa1.29□□□□□ -2.2
CKS1BP1-201ENST00000555221 H0Y9P7 68 aa1.28□□□□□ -2.2
CKS1BP1-201ENST00000555221 COX7CP15954 63 aa1.28□□□□□ -2.2
CKS1BP1-201ENST00000555221 C20orf197Q8N268 126 aa1.28□□□□□ -2.2
CKS1BP1-201ENST00000555221 LINC00208Q96KT6 92 aa1.28□□□□□ -2.2
CKS1BP1-201ENST00000555221 MUC5BQ9HC84 5762 aaPredicted RBP1.28□□□□□ -2.2
CKS1BP1-201ENST00000555221 FLGP20930 4061 aaPredicted RBP1.28□□□□□ -2.21
CKS1BP1-201ENST00000555221 ACYP2P14621 99 aa1.27□□□□□ -2.21
CKS1BP1-201ENST00000555221 MT1HP80294 61 aa1.27□□□□□ -2.21
CKS1BP1-201ENST00000555221 KRTAP2-3P0C7H8 128 aa1.26□□□□□ -2.21
CKS1BP1-201ENST00000555221 KRTAP2-4Q9BYR9 128 aa1.26□□□□□ -2.21
CKS1BP1-201ENST00000555221 CRIPTQ9P021 101 aa1.26□□□□□ -2.21
CKS1BP1-201ENST00000555221 S4R3F8 94 aa1.26□□□□□ -2.21
CKS1BP1-201ENST00000555221 HMCN1Q96RW7 5635 aa1.26□□□□□ -2.21
CKS1BP1-201ENST00000555221 FAM236AA0A1B0GUQ0 79 aa1.25□□□□□ -2.21
CKS1BP1-201ENST00000555221 FAM236BA0A1B0GV22 79 aa1.25□□□□□ -2.21
CKS1BP1-201ENST00000555221 SERP2Q8N6R1 65 aa1.25□□□□□ -2.21
CKS1BP1-201ENST00000555221 A0A087WVE0 104 aa1.24□□□□□ -2.21
CKS1BP1-201ENST00000555221 CHKB-CPT1BH3BT56 60 aa1.24□□□□□ -2.21
CKS1BP1-201ENST00000555221 KRTAP19-2Q3LHN2 52 aa1.24□□□□□ -2.21
CKS1BP1-201ENST00000555221 H0YAA0 97 aa1.23□□□□□ -2.21
CKS1BP1-201ENST00000555221 MT-ATP8P03928 68 aa1.23□□□□□ -2.21
CKS1BP1-201ENST00000555221 DMAC1Q96GE9 116 aa1.22□□□□□ -2.21
CKS1BP1-201ENST00000555221 KLKP1Q107X0 134 aa1.21□□□□□ -2.22
CKS1BP1-201ENST00000555221 SERP1Q9Y6X1 66 aa1.21□□□□□ -2.22
CKS1BP1-201ENST00000555221 M0QZ58 72 aa1.2□□□□□ -2.22
CKS1BP1-201ENST00000555221 ATP5EP56381 51 aaPredicted RBP1.2□□□□□ -2.22
CKS1BP1-201ENST00000555221 PLAC4Q8WY50 150 aa1.2□□□□□ -2.22
CKS1BP1-201ENST00000555221 PRR15LQ9BU68 103 aa1.19□□□□□ -2.22
CKS1BP1-201ENST00000555221 MT2AP02795 61 aa1.18□□□□□ -2.22
CKS1BP1-201ENST00000555221 Q5VV11 94 aa1.18□□□□□ -2.22
CKS1BP1-201ENST00000555221 KRTAP5-10Q6L8G5 202 aa1.18□□□□□ -2.22
CKS1BP1-201ENST00000555221 KRTAP2-1Q9BYU5 128 aa1.18□□□□□ -2.22
CKS1BP1-201ENST00000555221 SPRR2GQ9BYE4 73 aa1.17□□□□□ -2.22
CKS1BP1-201ENST00000555221 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
CKS1BP1-201ENST00000555221 MT1FP04733 61 aa1.16□□□□□ -2.22
CKS1BP1-201ENST00000555221 A6NN06 94 aa1.15□□□□□ -2.23
CKS1BP1-201ENST00000555221 H7BZZ5 65 aa1.15□□□□□ -2.23
CKS1BP1-201ENST00000555221 A0A1B0GU69 56 aa1.14□□□□□ -2.23
CKS1BP1-201ENST00000555221 KRTAP19-8Q3LI54 63 aa1.13□□□□□ -2.23
CKS1BP1-201ENST00000555221 KRTAP19-6Q3LI70 58 aa1.13□□□□□ -2.23
CKS1BP1-201ENST00000555221 MIR22HGQ0VDD5 57 aa1.12□□□□□ -2.23
CKS1BP1-201ENST00000555221 UQCR11O14957 56 aa1.11□□□□□ -2.23
CKS1BP1-201ENST00000555221 CCDC179H3BU77 68 aa1.1□□□□□ -2.23
CKS1BP1-201ENST00000555221 RPS28P62857 69 aaKnown RBP1.1□□□□□ -2.23
CKS1BP1-201ENST00000555221 LINC01558Q9Y6Z2 57 aa1.09□□□□□ -2.23
CKS1BP1-201ENST00000555221 MT1BP07438 61 aa1.08□□□□□ -2.24
CKS1BP1-201ENST00000555221 A0A0D9SG42 100 aa1.06□□□□□ -2.24
CKS1BP1-201ENST00000555221 TNP1P09430 55 aa1.06□□□□□ -2.24
CKS1BP1-201ENST00000555221 SPATA8Q6RVD6 105 aa1.05□□□□□ -2.24
CKS1BP1-201ENST00000555221 MT1XP80297 61 aa1.03□□□□□ -2.24
CKS1BP1-201ENST00000555221 KRTAP8-1Q8IUC2 63 aa1.03□□□□□ -2.24
CKS1BP1-201ENST00000555221 C10orf95Q9H7T3 257 aa1.02□□□□□ -2.25
CKS1BP1-201ENST00000555221 SPRR2FQ96RM1 72 aa1□□□□□ -2.25
CKS1BP1-201ENST00000555221 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
CKS1BP1-201ENST00000555221 SPRR2EP22531 72 aa0.97□□□□□ -2.25
CKS1BP1-201ENST00000555221 SPRR2BP35325 72 aa0.97□□□□□ -2.25
CKS1BP1-201ENST00000555221 SPRR2AP35326 72 aa0.97□□□□□ -2.25
CKS1BP1-201ENST00000555221 MT1GP13640 62 aa0.96□□□□□ -2.26
CKS1BP1-201ENST00000555221 KRTAP19-3Q7Z4W3 81 aa0.96□□□□□ -2.26
CKS1BP1-201ENST00000555221 BRK1Q8WUW1 75 aa0.96□□□□□ -2.26
CKS1BP1-201ENST00000555221 SPRR2DP22532 72 aa0.95□□□□□ -2.26
CKS1BP1-201ENST00000555221 MT1EP04732 61 aa0.92□□□□□ -2.26
CKS1BP1-201ENST00000555221 KRTAP19-5Q3LI72 72 aa0.92□□□□□ -2.26
CKS1BP1-201ENST00000555221 KRTAP19-7Q3SYF9 63 aa0.91□□□□□ -2.26
CKS1BP1-201ENST00000555221 MT1LQ93083 61 aa0.89□□□□□ -2.27
CKS1BP1-201ENST00000555221 SYNE1Q8NF91 8797 aaKnown RBP0.88□□□□□ -2.27
CKS1BP1-201ENST00000555221 MT4P47944 62 aa0.88□□□□□ -2.27
CKS1BP1-201ENST00000555221 MT1MQ8N339 61 aa0.88□□□□□ -2.27
CKS1BP1-201ENST00000555221 MT1AP04731 61 aa0.78□□□□□ -2.28
CKS1BP1-201ENST00000555221 KRTAP20-2Q3LI61 65 aa0.76□□□□□ -2.29
CKS1BP1-201ENST00000555221 KRTAP6-1Q3LI64 71 aa0.73□□□□□ -2.29
CKS1BP1-201ENST00000555221 KRTAP21-1Q3LI58 79 aa0.7□□□□□ -2.3
CKS1BP1-201ENST00000555221 KRTAP6-2Q3LI66 62 aa0.7□□□□□ -2.3
CKS1BP1-201ENST00000555221 PHGR1C9JFL3 82 aa0.68□□□□□ -2.3
CKS1BP1-201ENST00000555221 PRM1P04553 51 aa0.46□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 95.8 ms