RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 UQCR11O14957 56 aa4.3□□□□□ -1.72
TMEM260-206ENST00000555046 LCE1AQ5T7P2 110 aa4.3□□□□□ -1.72
TMEM260-206ENST00000555046 KRTAP12-1P59990 96 aa4.26□□□□□ -1.73
TMEM260-206ENST00000555046 HMCN1Q96RW7 5635 aa4.26□□□□□ -1.73
TMEM260-206ENST00000555046 Q1T7F1 81 aa4.25□□□□□ -1.73
TMEM260-206ENST00000555046 RPS28P62857 69 aaKnown RBP4.24□□□□□ -1.73
TMEM260-206ENST00000555046 KRTAP8-1Q8IUC2 63 aa4.23□□□□□ -1.73
TMEM260-206ENST00000555046 A8MU10 97 aa4.22□□□□□ -1.73
TMEM260-206ENST00000555046 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
TMEM260-206ENST00000555046 KRTAP10-7P60409 375 aaPredicted RBP4.2□□□□□ -1.74
TMEM260-206ENST00000555046 MIR22HGQ0VDD5 57 aa4.19□□□□□ -1.74
TMEM260-206ENST00000555046 KRTAP5-10Q6L8G5 202 aa4.19□□□□□ -1.74
TMEM260-206ENST00000555046 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.19□□□□□ -1.74
TMEM260-206ENST00000555046 K7ERS5 55 aa4.17□□□□□ -1.74
TMEM260-206ENST00000555046 PSPHP1O15172 72 aa4.17□□□□□ -1.74
TMEM260-206ENST00000555046 KRTAP5-7Q6L8G8 165 aa4.13□□□□□ -1.75
TMEM260-206ENST00000555046 A6NED7 52 aa4.09□□□□□ -1.75
TMEM260-206ENST00000555046 TNP1P09430 55 aa4.09□□□□□ -1.75
TMEM260-206ENST00000555046 KRTAP15-1Q3LI76 137 aa4.08□□□□□ -1.76
TMEM260-206ENST00000555046 SPRR5A0A1B0GTR4 108 aa4.07□□□□□ -1.76
TMEM260-206ENST00000555046 C10orf95Q9H7T3 257 aa4.05□□□□□ -1.76
TMEM260-206ENST00000555046 KRTAP5-11Q6L8G4 156 aa4□□□□□ -1.77
TMEM260-206ENST00000555046 KRTAP25-1Q3LHN0 102 aa3.97□□□□□ -1.77
TMEM260-206ENST00000555046 KRTAP19-7Q3SYF9 63 aa3.93□□□□□ -1.78
TMEM260-206ENST00000555046 CDC42SE1Q9NRR8 79 aa3.93□□□□□ -1.78
TMEM260-206ENST00000555046 KRTAP19-5Q3LI72 72 aa3.91□□□□□ -1.78
TMEM260-206ENST00000555046 MT1EP04732 61 aa3.9□□□□□ -1.79
TMEM260-206ENST00000555046 LCE3AQ5TA76 89 aa3.9□□□□□ -1.79
TMEM260-206ENST00000555046 AHNAKQ09666 5890 aaKnown RBP3.9□□□□□ -1.79
TMEM260-206ENST00000555046 KRTAP23-1A1A580 65 aa3.87□□□□□ -1.79
TMEM260-206ENST00000555046 KRTAP19-3Q7Z4W3 81 aa3.87□□□□□ -1.79
TMEM260-206ENST00000555046 MT4P47944 62 aa3.86□□□□□ -1.79
TMEM260-206ENST00000555046 MT1GP13640 62 aa3.84□□□□□ -1.79
TMEM260-206ENST00000555046 PP632Q6XCG6 107 aa3.84□□□□□ -1.79
TMEM260-206ENST00000555046 ROMO1P60602 79 aa3.83□□□□□ -1.8
TMEM260-206ENST00000555046 KRTAP12-3P60328 96 aa3.81□□□□□ -1.8
TMEM260-206ENST00000555046 MT1LQ93083 61 aa3.77□□□□□ -1.81
TMEM260-206ENST00000555046 MUC5BQ9HC84 5762 aaPredicted RBP3.74□□□□□ -1.81
TMEM260-206ENST00000555046 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
TMEM260-206ENST00000555046 MT1MQ8N339 61 aa3.7□□□□□ -1.82
TMEM260-206ENST00000555046 BRK1Q8WUW1 75 aa3.7□□□□□ -1.82
TMEM260-206ENST00000555046 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
TMEM260-206ENST00000555046 KRTAP5-1Q6L8H4 278 aa3.62□□□□□ -1.83
TMEM260-206ENST00000555046 PRO0628Q9UI54 55 aa3.59□□□□□ -1.83
TMEM260-206ENST00000555046 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
TMEM260-206ENST00000555046 PMAIP1Q13794 54 aa3.54□□□□□ -1.84
TMEM260-206ENST00000555046 KRTAP4-3Q9BYR4 195 aa3.54□□□□□ -1.84
TMEM260-206ENST00000555046 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
TMEM260-206ENST00000555046 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
TMEM260-206ENST00000555046 KRTAP20-2Q3LI61 65 aa3.41□□□□□ -1.86
TMEM260-206ENST00000555046 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
TMEM260-206ENST00000555046 KRTAP12-4P60329 112 aa3.34□□□□□ -1.87
TMEM260-206ENST00000555046 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
TMEM260-206ENST00000555046 PRAC1Q96KF2 57 aa3.27□□□□□ -1.89
TMEM260-206ENST00000555046 KTN1-AS1Q86SY8 53 aa3.26□□□□□ -1.89
TMEM260-206ENST00000555046 MT1AP04731 61 aa3.23□□□□□ -1.89
TMEM260-206ENST00000555046 KRTAP9-6A8MVA2 160 aa3.22□□□□□ -1.89
TMEM260-206ENST00000555046 SYNE1Q8NF91 8797 aaKnown RBP3.2□□□□□ -1.9
TMEM260-206ENST00000555046 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
TMEM260-206ENST00000555046 KRTAP6-1Q3LI64 71 aa3.16□□□□□ -1.9
TMEM260-206ENST00000555046 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
TMEM260-206ENST00000555046 MT3P25713 68 aa3.01□□□□□ -1.93
TMEM260-206ENST00000555046 KRTAP6-2Q3LI66 62 aa3□□□□□ -1.93
TMEM260-206ENST00000555046 LUZP6Q538Z0 58 aa2.89□□□□□ -1.95
TMEM260-206ENST00000555046 A0A0A0MQY5 61 aa2.74□□□□□ -1.97
TMEM260-206ENST00000555046 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
TMEM260-206ENST00000555046 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
TMEM260-206ENST00000555046 NDUFAF8A1L188 74 aa2.52□□□□□ -2.01
TMEM260-206ENST00000555046 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
TMEM260-206ENST00000555046 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
TMEM260-206ENST00000555046 LCE3EQ5T5B0 92 aa2.49□□□□□ -2.01
TMEM260-206ENST00000555046 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
TMEM260-206ENST00000555046 INE1O15225 51 aa2.21□□□□□ -2.06
TMEM260-206ENST00000555046 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
TMEM260-206ENST00000555046 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
TMEM260-206ENST00000555046 PRM1P04553 51 aa1.93□□□□□ -2.1
TMEM260-206ENST00000555046 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
TMEM260-206ENST00000555046 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 181.3 ms