RNA–Protein interactions for RNA: ENST00000554974.5

XRCC3-210, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4 BASIC

Gene XRCC3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-210ENST00000554974 LCE1DQ5T752 114 aa5.59□□□□□ -1.51
XRCC3-210ENST00000554974 CDC42SE1Q9NRR8 79 aa5.56□□□□□ -1.52
XRCC3-210ENST00000554974 PRO0628Q9UI54 55 aa5.56□□□□□ -1.52
XRCC3-210ENST00000554974 C10orf95Q9H7T3 257 aa5.55□□□□□ -1.52
XRCC3-210ENST00000554974 HMCN1Q96RW7 5635 aa5.51□□□□□ -1.53
XRCC3-210ENST00000554974 MT4P47944 62 aa5.5□□□□□ -1.53
XRCC3-210ENST00000554974 TNP1P09430 55 aa5.45□□□□□ -1.54
XRCC3-210ENST00000554974 K7ERS5 55 aa5.44□□□□□ -1.54
XRCC3-210ENST00000554974 MT1GP13640 62 aa5.44□□□□□ -1.54
XRCC3-210ENST00000554974 KRTAP19-5Q3LI72 72 aa5.44□□□□□ -1.54
XRCC3-210ENST00000554974 LCE4AQ5TA78 99 aa5.44□□□□□ -1.54
XRCC3-210ENST00000554974 PP632Q6XCG6 107 aa5.4□□□□□ -1.54
XRCC3-210ENST00000554974 MT1MQ8N339 61 aa5.39□□□□□ -1.55
XRCC3-210ENST00000554974 AHNAK2Q8IVF2 5795 aa5.39□□□□□ -1.55
XRCC3-210ENST00000554974 LCE3AQ5TA76 89 aa5.34□□□□□ -1.55
XRCC3-210ENST00000554974 KRTAP5-10Q6L8G5 202 aa5.34□□□□□ -1.55
XRCC3-210ENST00000554974 PMAIP1Q13794 54 aa5.33□□□□□ -1.56
XRCC3-210ENST00000554974 MT1LQ93083 61 aa5.33□□□□□ -1.56
XRCC3-210ENST00000554974 KRTAP4-3Q9BYR4 195 aa5.32□□□□□ -1.56
XRCC3-210ENST00000554974 KRTAP5-4Q6L8H1 288 aa5.31□□□□□ -1.56
XRCC3-210ENST00000554974 KRTAP25-1Q3LHN0 102 aa5.3□□□□□ -1.56
XRCC3-210ENST00000554974 KRTAP4-6Q9BYQ5 205 aa5.3□□□□□ -1.56
XRCC3-210ENST00000554974 SVIPQ8NHG7 77 aa5.26□□□□□ -1.57
XRCC3-210ENST00000554974 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
XRCC3-210ENST00000554974 KRTAP5-7Q6L8G8 165 aa5.16□□□□□ -1.58
XRCC3-210ENST00000554974 KRTAP12-3P60328 96 aa5.15□□□□□ -1.59
XRCC3-210ENST00000554974 ROMO1P60602 79 aa5.15□□□□□ -1.59
XRCC3-210ENST00000554974 KRTAP5-3Q6L8H2 238 aa5.14□□□□□ -1.59
XRCC3-210ENST00000554974 KTN1-AS1Q86SY8 53 aa5.14□□□□□ -1.59
XRCC3-210ENST00000554974 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
XRCC3-210ENST00000554974 KRTAP20-2Q3LI61 65 aa5.04□□□□□ -1.6
XRCC3-210ENST00000554974 KRTAP5-5Q701N2 237 aaPredicted RBP4.97□□□□□ -1.61
XRCC3-210ENST00000554974 SPRR5A0A1B0GTR4 108 aa4.95□□□□□ -1.62
XRCC3-210ENST00000554974 KRTAP19-4Q3LI73 84 aa4.92□□□□□ -1.62
XRCC3-210ENST00000554974 KRTAP15-1Q3LI76 137 aa4.9□□□□□ -1.63
XRCC3-210ENST00000554974 KRTAP12-4P60329 112 aa4.88□□□□□ -1.63
XRCC3-210ENST00000554974 PRAC1Q96KF2 57 aa4.86□□□□□ -1.63
XRCC3-210ENST00000554974 LOC100996750A0A140TA64 210 aa4.84□□□□□ -1.63
XRCC3-210ENST00000554974 SYNE1Q8NF91 8797 aaKnown RBP4.81□□□□□ -1.64
XRCC3-210ENST00000554974 LCE3CQ5T5A8 94 aa4.77□□□□□ -1.65
XRCC3-210ENST00000554974 KRTAP4-11Q9BYQ6 195 aa4.68□□□□□ -1.66
XRCC3-210ENST00000554974 KRTAP5-2Q701N4 177 aa4.6□□□□□ -1.67
XRCC3-210ENST00000554974 KRTAP6-1Q3LI64 71 aa4.54□□□□□ -1.68
XRCC3-210ENST00000554974 MUC5ACP98088 5654 aa4.53□□□□□ -1.68
XRCC3-210ENST00000554974 KRTAP5-8O75690 187 aa4.53□□□□□ -1.68
XRCC3-210ENST00000554974 KRTAP9-6A8MVA2 160 aa4.52□□□□□ -1.69
XRCC3-210ENST00000554974 MT1AP04731 61 aa4.51□□□□□ -1.69
XRCC3-210ENST00000554974 AHNAKQ09666 5890 aaKnown RBP4.51□□□□□ -1.69
XRCC3-210ENST00000554974 MUC5BQ9HC84 5762 aaPredicted RBP4.47□□□□□ -1.69
XRCC3-210ENST00000554974 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.7
XRCC3-210ENST00000554974 KRTAP6-2Q3LI66 62 aa4.4□□□□□ -1.71
XRCC3-210ENST00000554974 KRTAP9-4Q9BYQ2 154 aa4.39□□□□□ -1.71
XRCC3-210ENST00000554974 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
XRCC3-210ENST00000554974 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
XRCC3-210ENST00000554974 MT3P25713 68 aa4.12□□□□□ -1.75
XRCC3-210ENST00000554974 LUZP6Q538Z0 58 aa4.12□□□□□ -1.75
XRCC3-210ENST00000554974 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
XRCC3-210ENST00000554974 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
XRCC3-210ENST00000554974 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
XRCC3-210ENST00000554974 LCE1BQ5T7P3 118 aa3.71□□□□□ -1.82
XRCC3-210ENST00000554974 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
XRCC3-210ENST00000554974 H3BS24 57 aa3.6□□□□□ -1.83
XRCC3-210ENST00000554974 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
XRCC3-210ENST00000554974 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
XRCC3-210ENST00000554974 LCE3DQ9BYE3 92 aa3.48□□□□□ -1.85
XRCC3-210ENST00000554974 INE1O15225 51 aa3.39□□□□□ -1.87
XRCC3-210ENST00000554974 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
XRCC3-210ENST00000554974 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
XRCC3-210ENST00000554974 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
XRCC3-210ENST00000554974 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
XRCC3-210ENST00000554974 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
XRCC3-210ENST00000554974 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
XRCC3-210ENST00000554974 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
XRCC3-210ENST00000554974 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
XRCC3-210ENST00000554974 PRM1P04553 51 aa2.64□□□□□ -1.99
XRCC3-210ENST00000554974 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
XRCC3-210ENST00000554974 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 6.5 ms