RNA–Protein interactions for RNA: ENST00000554973.1

FCF1-207, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3

Gene FCF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-207ENST00000554973 BIRC6Q9NR09 4857 aa0.54□□□□□ -2.32
FCF1-207ENST00000554973 FAT3Q8TDW7 4589 aa0.53□□□□□ -2.32
FCF1-207ENST00000554973 SRRM2Q9UQ35 2752 aaKnown RBP0.53□□□□□ -2.32
FCF1-207ENST00000554973 HERC1Q15751 4861 aa0.53□□□□□ -2.32
FCF1-207ENST00000554973 UBR4Q5T4S7 5183 aa0.52□□□□□ -2.33
FCF1-207ENST00000554973 SMIM27A0A1W2PRY6 76 aa0.52□□□□□ -2.33
FCF1-207ENST00000554973 DEFB131AP59861 70 aa0.52□□□□□ -2.33
FCF1-207ENST00000554973 HMCN2Q8NDA2 5059 aa0.52□□□□□ -2.33
FCF1-207ENST00000554973 LINC01546A6NGU7 62 aa0.51□□□□□ -2.33
FCF1-207ENST00000554973 H3BNG1 76 aa0.51□□□□□ -2.33
FCF1-207ENST00000554973 M0QY20 66 aa0.51□□□□□ -2.33
FCF1-207ENST00000554973 DEFB4AO15263 64 aa0.51□□□□□ -2.33
FCF1-207ENST00000554973 RPL39LQ96EH5 51 aaKnown RBP0.51□□□□□ -2.33
FCF1-207ENST00000554973 NOP10Q9NPE3 64 aaKnown RBP0.51□□□□□ -2.33
FCF1-207ENST00000554973 TIMM8BQ9Y5J9 83 aaPredicted RBP0.51□□□□□ -2.33
FCF1-207ENST00000554973 MUC2Q02817 5179 aa0.51□□□□□ -2.33
FCF1-207ENST00000554973 RNF213Q63HN8 5207 aa0.5□□□□□ -2.33
FCF1-207ENST00000554973 A0A096LPF7 62 aa0.5□□□□□ -2.33
FCF1-207ENST00000554973 SPART-AS1P0CW21 52 aa0.5□□□□□ -2.33
FCF1-207ENST00000554973 POLR2KP53803 58 aaKnown RBP0.5□□□□□ -2.33
FCF1-207ENST00000554973 LINC01556Q5JQF7 62 aa0.5□□□□□ -2.33
FCF1-207ENST00000554973 WFDC10BQ8IUB3 73 aa0.5□□□□□ -2.33
FCF1-207ENST00000554973 SMIM2Q9BVW6 85 aa0.5□□□□□ -2.33
FCF1-207ENST00000554973 HTN1P15515 57 aa0.49□□□□□ -2.33
FCF1-207ENST00000554973 HTN3P15516 51 aa0.49□□□□□ -2.33
FCF1-207ENST00000554973 RPL39P62891 51 aaKnown RBP0.49□□□□□ -2.33
FCF1-207ENST00000554973 LRP2P98164 4655 aa0.48□□□□□ -2.33
FCF1-207ENST00000554973 DEFB104AQ8WTQ1 72 aa0.48□□□□□ -2.33
FCF1-207ENST00000554973 NDUFA1O15239 70 aa0.47□□□□□ -2.33
FCF1-207ENST00000554973 CLPSL2Q6UWE3 100 aa0.47□□□□□ -2.33
FCF1-207ENST00000554973 MUC17Q685J3 4493 aa0.47□□□□□ -2.33
FCF1-207ENST00000554973 FLGP20930 4061 aaPredicted RBP0.46□□□□□ -2.34
FCF1-207ENST00000554973 A0A096LNI7 61 aa0.46□□□□□ -2.34
FCF1-207ENST00000554973 MT1HL1P0DM35 61 aa0.46□□□□□ -2.34
FCF1-207ENST00000554973 IGLV5-48A0A075B6I7 105 aa0.44□□□□□ -2.34
FCF1-207ENST00000554973 SMR3BP02814 79 aaPredicted RBP0.44□□□□□ -2.34
FCF1-207ENST00000554973 TOMM7Q9P0U1 55 aa0.44□□□□□ -2.34
FCF1-207ENST00000554973 FSIP2Q5CZC0 6907 aa0.43□□□□□ -2.34
FCF1-207ENST00000554973 USH2AO75445 5202 aa0.42□□□□□ -2.34
FCF1-207ENST00000554973 MACF1Q9UPN3 7388 aaKnown RBP0.42□□□□□ -2.34
FCF1-207ENST00000554973 C9orf92A6NGG3 77 aa0.42□□□□□ -2.34
FCF1-207ENST00000554973 RPS29P62273 56 aaKnown RBP0.42□□□□□ -2.34
FCF1-207ENST00000554973 KRTAP19-2Q3LHN2 52 aa0.41□□□□□ -2.34
FCF1-207ENST00000554973 MUC5ACP98088 5654 aa0.41□□□□□ -2.34
FCF1-207ENST00000554973 NEBP20929 6669 aa0.41□□□□□ -2.34
FCF1-207ENST00000554973 MDN1Q9NU22 5596 aa0.41□□□□□ -2.34
FCF1-207ENST00000554973 SYNE2Q8WXH0 6885 aaKnown RBP0.41□□□□□ -2.34
FCF1-207ENST00000554973 SSPOA2VEC9 5147 aa0.4□□□□□ -2.35
FCF1-207ENST00000554973 MMP24-AS1A0A0U1RRL7 71 aa0.39□□□□□ -2.35
FCF1-207ENST00000554973 KMT2DO14686 5537 aa0.38□□□□□ -2.35
FCF1-207ENST00000554973 MT1HP80294 61 aa0.38□□□□□ -2.35
FCF1-207ENST00000554973 MUC12Q9UKN1 5478 aa0.37□□□□□ -2.35
FCF1-207ENST00000554973 MT2AP02795 61 aa0.36□□□□□ -2.35
FCF1-207ENST00000554973 MT1FP04733 61 aa0.36□□□□□ -2.35
FCF1-207ENST00000554973 SPRR2GQ9BYE4 73 aa0.35□□□□□ -2.35
FCF1-207ENST00000554973 DSTQ03001 7570 aaKnown RBP0.34□□□□□ -2.35
FCF1-207ENST00000554973 MT1BP07438 61 aa0.34□□□□□ -2.36
FCF1-207ENST00000554973 SPRR2AP35326 72 aa0.33□□□□□ -2.36
FCF1-207ENST00000554973 KRTAP19-8Q3LI54 63 aa0.33□□□□□ -2.36
FCF1-207ENST00000554973 KRTAP19-6Q3LI70 58 aa0.33□□□□□ -2.36
FCF1-207ENST00000554973 MT1XP80297 61 aa0.32□□□□□ -2.36
FCF1-207ENST00000554973 M0QZ58 72 aa0.3□□□□□ -2.36
FCF1-207ENST00000554973 MT1EP04732 61 aa0.29□□□□□ -2.36
FCF1-207ENST00000554973 KRTAP19-7Q3SYF9 63 aa0.29□□□□□ -2.36
FCF1-207ENST00000554973 KRTAP6-2Q3LI66 62 aa0.28□□□□□ -2.36
FCF1-207ENST00000554973 KRTAP8-1Q8IUC2 63 aa0.28□□□□□ -2.36
FCF1-207ENST00000554973 KRTAP19-5Q3LI72 72 aa0.27□□□□□ -2.37
FCF1-207ENST00000554973 MT1LQ93083 61 aa0.27□□□□□ -2.37
FCF1-207ENST00000554973 SPRR2FQ96RM1 72 aa0.27□□□□□ -2.37
FCF1-207ENST00000554973 TNP1P09430 55 aa0.26□□□□□ -2.37
FCF1-207ENST00000554973 SPRR2EP22531 72 aa0.26□□□□□ -2.37
FCF1-207ENST00000554973 MT1MQ8N339 61 aa0.26□□□□□ -2.37
FCF1-207ENST00000554973 MT1GP13640 62 aa0.25□□□□□ -2.37
FCF1-207ENST00000554973 KRTAP20-1Q3LI63 56 aa0.24□□□□□ -2.37
FCF1-207ENST00000554973 MT1AP04731 61 aa0.23□□□□□ -2.37
FCF1-207ENST00000554973 KRTAP20-2Q3LI61 65 aa0.23□□□□□ -2.37
FCF1-207ENST00000554973 KRTAP6-1Q3LI64 71 aa0.22□□□□□ -2.37
FCF1-207ENST00000554973 MT4P47944 62 aa0.21□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 1815.9 ms