RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 KRTAP2-4Q9BYR9 128 aa3.5□□□□□ -1.85
PSEN1-209ENST00000553855 PRR15LQ9BU68 103 aa3.49□□□□□ -1.85
PSEN1-209ENST00000553855 A0A1B0GU69 56 aa3.47□□□□□ -1.85
PSEN1-209ENST00000553855 BRK1Q8WUW1 75 aa3.47□□□□□ -1.85
PSEN1-209ENST00000553855 A0A1B0GU33 70 aa3.46□□□□□ -1.86
PSEN1-209ENST00000553855 MT1XP80297 61 aa3.46□□□□□ -1.86
PSEN1-209ENST00000553855 A6NED7 52 aa3.43□□□□□ -1.86
PSEN1-209ENST00000553855 A0A0D9SG42 100 aa3.42□□□□□ -1.86
PSEN1-209ENST00000553855 KRTAP13-4Q3LI77 160 aa3.41□□□□□ -1.86
PSEN1-209ENST00000553855 CDC42SE1Q9NRR8 79 aa3.41□□□□□ -1.86
PSEN1-209ENST00000553855 KRTAP12-2P59991 146 aa3.39□□□□□ -1.87
PSEN1-209ENST00000553855 SPATA8Q6RVD6 105 aa3.39□□□□□ -1.87
PSEN1-209ENST00000553855 SPINT4Q6UDR6 99 aa3.39□□□□□ -1.87
PSEN1-209ENST00000553855 UQCR11O14957 56 aa3.38□□□□□ -1.87
PSEN1-209ENST00000553855 KRTAP8-1Q8IUC2 63 aa3.37□□□□□ -1.87
PSEN1-209ENST00000553855 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
PSEN1-209ENST00000553855 KRTAP2-1Q9BYU5 128 aa3.35□□□□□ -1.87
PSEN1-209ENST00000553855 SPRR2FQ96RM1 72 aa3.34□□□□□ -1.87
PSEN1-209ENST00000553855 LUZP6Q538Z0 58 aa3.33□□□□□ -1.88
PSEN1-209ENST00000553855 MIR22HGQ0VDD5 57 aa3.32□□□□□ -1.88
PSEN1-209ENST00000553855 PMAIP1Q13794 54 aa3.32□□□□□ -1.88
PSEN1-209ENST00000553855 KRTAP12-1P59990 96 aa3.29□□□□□ -1.88
PSEN1-209ENST00000553855 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
PSEN1-209ENST00000553855 SPRR2EP22531 72 aa3.27□□□□□ -1.89
PSEN1-209ENST00000553855 SPRR2BP35325 72 aa3.27□□□□□ -1.89
PSEN1-209ENST00000553855 SPRR2AP35326 72 aa3.27□□□□□ -1.89
PSEN1-209ENST00000553855 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
PSEN1-209ENST00000553855 K7ERS5 55 aa3.22□□□□□ -1.89
PSEN1-209ENST00000553855 KTN1-AS1Q86SY8 53 aa3.22□□□□□ -1.89
PSEN1-209ENST00000553855 TNP1P09430 55 aa3.19□□□□□ -1.9
PSEN1-209ENST00000553855 DSTQ03001 7570 aaKnown RBP3.17□□□□□ -1.9
PSEN1-209ENST00000553855 SPRR2DP22532 72 aa3.16□□□□□ -1.9
PSEN1-209ENST00000553855 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
PSEN1-209ENST00000553855 C10orf95Q9H7T3 257 aa3.12□□□□□ -1.91
PSEN1-209ENST00000553855 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
PSEN1-209ENST00000553855 KRTAP19-7Q3SYF9 63 aa3.08□□□□□ -1.92
PSEN1-209ENST00000553855 MT1EP04732 61 aa3.07□□□□□ -1.92
PSEN1-209ENST00000553855 KRTAP19-5Q3LI72 72 aa3.07□□□□□ -1.92
PSEN1-209ENST00000553855 LCE3AQ5TA76 89 aa3.06□□□□□ -1.92
PSEN1-209ENST00000553855 HMCN1Q96RW7 5635 aa3.05□□□□□ -1.92
PSEN1-209ENST00000553855 ROMO1P60602 79 aa3.05□□□□□ -1.92
PSEN1-209ENST00000553855 KRTAP25-1Q3LHN0 102 aa3.05□□□□□ -1.92
PSEN1-209ENST00000553855 PP632Q6XCG6 107 aa3.05□□□□□ -1.92
PSEN1-209ENST00000553855 KRTAP19-3Q7Z4W3 81 aa3.05□□□□□ -1.92
PSEN1-209ENST00000553855 MT1GP13640 62 aa3.01□□□□□ -1.93
PSEN1-209ENST00000553855 SPRR5A0A1B0GTR4 108 aa2.97□□□□□ -1.93
PSEN1-209ENST00000553855 KRTAP12-3P60328 96 aa2.97□□□□□ -1.93
PSEN1-209ENST00000553855 KRTAP5-10Q6L8G5 202 aa2.96□□□□□ -1.94
PSEN1-209ENST00000553855 MT1LQ93083 61 aa2.96□□□□□ -1.94
PSEN1-209ENST00000553855 KRTAP5-7Q6L8G8 165 aa2.95□□□□□ -1.94
PSEN1-209ENST00000553855 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
PSEN1-209ENST00000553855 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
PSEN1-209ENST00000553855 MT1MQ8N339 61 aa2.92□□□□□ -1.94
PSEN1-209ENST00000553855 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
PSEN1-209ENST00000553855 KRTAP4-3Q9BYR4 195 aa2.81□□□□□ -1.96
PSEN1-209ENST00000553855 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
PSEN1-209ENST00000553855 MT4P47944 62 aa2.74□□□□□ -1.97
PSEN1-209ENST00000553855 OBSCNQ5VST9 7968 aa2.7□□□□□ -1.98
PSEN1-209ENST00000553855 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
PSEN1-209ENST00000553855 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
PSEN1-209ENST00000553855 KRTAP12-4P60329 112 aa2.65□□□□□ -1.99
PSEN1-209ENST00000553855 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
PSEN1-209ENST00000553855 SYNE1Q8NF91 8797 aaKnown RBP2.58□□□□□ -2
PSEN1-209ENST00000553855 KRTAP20-2Q3LI61 65 aa2.56□□□□□ -2
PSEN1-209ENST00000553855 MT1AP04731 61 aa2.53□□□□□ -2
PSEN1-209ENST00000553855 KRTAP6-1Q3LI64 71 aa2.48□□□□□ -2.01
PSEN1-209ENST00000553855 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
PSEN1-209ENST00000553855 LCE1BQ5T7P3 118 aa2.43□□□□□ -2.02
PSEN1-209ENST00000553855 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
PSEN1-209ENST00000553855 KRTAP6-2Q3LI66 62 aa2.37□□□□□ -2.03
PSEN1-209ENST00000553855 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
PSEN1-209ENST00000553855 INE1O15225 51 aa2.15□□□□□ -2.07
PSEN1-209ENST00000553855 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
PSEN1-209ENST00000553855 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
PSEN1-209ENST00000553855 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
PSEN1-209ENST00000553855 PRM1P04553 51 aa1.56□□□□□ -2.16
PSEN1-209ENST00000553855 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
PSEN1-209ENST00000553855 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 88.7 ms