RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 LCE3AQ5TA76 89 aa4.53□□□□□ -1.68
NEK9-202ENST00000553823 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
NEK9-202ENST00000553823 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
NEK9-202ENST00000553823 KMT2DO14686 5537 aa4.48□□□□□ -1.69
NEK9-202ENST00000553823 KRTAP8-1Q8IUC2 63 aa4.46□□□□□ -1.7
NEK9-202ENST00000553823 MACF1Q9UPN3 7388 aaKnown RBP4.46□□□□□ -1.7
NEK9-202ENST00000553823 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
NEK9-202ENST00000553823 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.43□□□□□ -1.7
NEK9-202ENST00000553823 KRTAP19-5Q3LI72 72 aa4.39□□□□□ -1.71
NEK9-202ENST00000553823 KRTAP12-3P60328 96 aa4.36□□□□□ -1.71
NEK9-202ENST00000553823 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
NEK9-202ENST00000553823 SPRR2FQ96RM1 72 aa4.33□□□□□ -1.72
NEK9-202ENST00000553823 KRTAP5-9P26371 169 aa4.32□□□□□ -1.72
NEK9-202ENST00000553823 KRTAP6-3Q3LI67 103 aa4.32□□□□□ -1.72
NEK9-202ENST00000553823 SVIPQ8NHG7 77 aa4.32□□□□□ -1.72
NEK9-202ENST00000553823 SYNE2Q8WXH0 6885 aaKnown RBP4.3□□□□□ -1.72
NEK9-202ENST00000553823 MT1EP04732 61 aa4.3□□□□□ -1.72
NEK9-202ENST00000553823 KRTAP5-11Q6L8G4 156 aa4.29□□□□□ -1.72
NEK9-202ENST00000553823 MUC12Q9UKN1 5478 aa4.21□□□□□ -1.74
NEK9-202ENST00000553823 MT1LQ93083 61 aa4.2□□□□□ -1.74
NEK9-202ENST00000553823 KRTAP2-2Q9BYT5 123 aa4.19□□□□□ -1.74
NEK9-202ENST00000553823 KRTAP19-3Q7Z4W3 81 aa4.17□□□□□ -1.74
NEK9-202ENST00000553823 SPRR2EP22531 72 aa4.15□□□□□ -1.75
NEK9-202ENST00000553823 SPRR2BP35325 72 aa4.15□□□□□ -1.75
NEK9-202ENST00000553823 SPRR2AP35326 72 aa4.15□□□□□ -1.75
NEK9-202ENST00000553823 MT1GP13640 62 aa4.13□□□□□ -1.75
NEK9-202ENST00000553823 MDN1Q9NU22 5596 aa4.09□□□□□ -1.76
NEK9-202ENST00000553823 MT1MQ8N339 61 aa4.07□□□□□ -1.76
NEK9-202ENST00000553823 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
NEK9-202ENST00000553823 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
NEK9-202ENST00000553823 NEBP20929 6669 aa4.02□□□□□ -1.77
NEK9-202ENST00000553823 SPRR2DP22532 72 aa4□□□□□ -1.77
NEK9-202ENST00000553823 KRTAP4-3Q9BYR4 195 aa3.96□□□□□ -1.78
NEK9-202ENST00000553823 SPRR5A0A1B0GTR4 108 aa3.91□□□□□ -1.78
NEK9-202ENST00000553823 DSTQ03001 7570 aaKnown RBP3.84□□□□□ -1.79
NEK9-202ENST00000553823 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
NEK9-202ENST00000553823 KRTAP2-3P0C7H8 128 aa3.81□□□□□ -1.8
NEK9-202ENST00000553823 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
NEK9-202ENST00000553823 KRTAP2-4Q9BYR9 128 aa3.81□□□□□ -1.8
NEK9-202ENST00000553823 KRTAP20-1Q3LI63 56 aa3.78□□□□□ -1.8
NEK9-202ENST00000553823 LUZP6Q538Z0 58 aa3.73□□□□□ -1.81
NEK9-202ENST00000553823 MT3P25713 68 aa3.72□□□□□ -1.81
NEK9-202ENST00000553823 KRTAP2-1Q9BYU5 128 aa3.72□□□□□ -1.81
NEK9-202ENST00000553823 KRTAP5-4Q6L8H1 288 aa3.71□□□□□ -1.82
NEK9-202ENST00000553823 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
NEK9-202ENST00000553823 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
NEK9-202ENST00000553823 MT1AP04731 61 aa3.58□□□□□ -1.84
NEK9-202ENST00000553823 KRTAP6-1Q3LI64 71 aa3.53□□□□□ -1.84
NEK9-202ENST00000553823 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
NEK9-202ENST00000553823 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
NEK9-202ENST00000553823 MT4P47944 62 aa3.46□□□□□ -1.86
NEK9-202ENST00000553823 KRTAP12-4P60329 112 aa3.46□□□□□ -1.86
NEK9-202ENST00000553823 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
NEK9-202ENST00000553823 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
NEK9-202ENST00000553823 KRTAP20-2Q3LI61 65 aa3.35□□□□□ -1.87
NEK9-202ENST00000553823 HMCN1Q96RW7 5635 aa3.35□□□□□ -1.87
NEK9-202ENST00000553823 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
NEK9-202ENST00000553823 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
NEK9-202ENST00000553823 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
NEK9-202ENST00000553823 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
NEK9-202ENST00000553823 AHNAK2Q8IVF2 5795 aa3.07□□□□□ -1.92
NEK9-202ENST00000553823 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
NEK9-202ENST00000553823 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
NEK9-202ENST00000553823 KRTAP5-10Q6L8G5 202 aa2.93□□□□□ -1.94
NEK9-202ENST00000553823 INE1O15225 51 aa2.9□□□□□ -1.95
NEK9-202ENST00000553823 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
NEK9-202ENST00000553823 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
NEK9-202ENST00000553823 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
NEK9-202ENST00000553823 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
NEK9-202ENST00000553823 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
NEK9-202ENST00000553823 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
NEK9-202ENST00000553823 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
NEK9-202ENST00000553823 PRM1P04553 51 aa2.48□□□□□ -2.01
NEK9-202ENST00000553823 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
NEK9-202ENST00000553823 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
NEK9-202ENST00000553823 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
NEK9-202ENST00000553823 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
NEK9-202ENST00000553823 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 10 ms