RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 KRTAP19-5Q3LI72 72 aa6.37□□□□□ -1.39
SYNE2-211ENST00000553801 KRTAP5-10Q6L8G5 202 aa6.37□□□□□ -1.39
SYNE2-211ENST00000553801 KRTAP4-12Q9BQ66 201 aa6.36□□□□□ -1.39
SYNE2-211ENST00000553801 MT1MQ8N339 61 aa6.33□□□□□ -1.4
SYNE2-211ENST00000553801 KRTAP5-4Q6L8H1 288 aa6.3□□□□□ -1.4
SYNE2-211ENST00000553801 KTN1-AS1Q86SY8 53 aa6.27□□□□□ -1.41
SYNE2-211ENST00000553801 MT1LQ93083 61 aa6.25□□□□□ -1.41
SYNE2-211ENST00000553801 CDC42SE1Q9NRR8 79 aa6.24□□□□□ -1.41
SYNE2-211ENST00000553801 PSPHP1O15172 72 aa6.23□□□□□ -1.41
SYNE2-211ENST00000553801 LINC01558Q9Y6Z2 57 aa6.22□□□□□ -1.41
SYNE2-211ENST00000553801 KRTAP5-7Q6L8G8 165 aa6.2□□□□□ -1.42
SYNE2-211ENST00000553801 COA5Q86WW8 74 aa6.18□□□□□ -1.42
SYNE2-211ENST00000553801 PRR15LQ9BU68 103 aa6.18□□□□□ -1.42
SYNE2-211ENST00000553801 SPINT4Q6UDR6 99 aa6.17□□□□□ -1.42
SYNE2-211ENST00000553801 KRTAP4-3Q9BYR4 195 aa6.17□□□□□ -1.42
SYNE2-211ENST00000553801 A6NED7 52 aa6.16□□□□□ -1.42
SYNE2-211ENST00000553801 KRTAP5-3Q6L8H2 238 aa6.13□□□□□ -1.43
SYNE2-211ENST00000553801 KRTAP9-9Q9BYP9 154 aa6.12□□□□□ -1.43
SYNE2-211ENST00000553801 KRTAP9-4Q9BYQ2 154 aa6.12□□□□□ -1.43
SYNE2-211ENST00000553801 SPATA8Q6RVD6 105 aa6.08□□□□□ -1.44
SYNE2-211ENST00000553801 KRTAP12-1P59990 96 aa6.05□□□□□ -1.44
SYNE2-211ENST00000553801 C10orf95Q9H7T3 257 aa6.05□□□□□ -1.44
SYNE2-211ENST00000553801 A0A1B0GU33 70 aa6.01□□□□□ -1.45
SYNE2-211ENST00000553801 LCE3AQ5TA76 89 aa6.01□□□□□ -1.45
SYNE2-211ENST00000553801 KRTAP20-2Q3LI61 65 aa5.98□□□□□ -1.45
SYNE2-211ENST00000553801 TNP1P09430 55 aa5.95□□□□□ -1.46
SYNE2-211ENST00000553801 SPRR5A0A1B0GTR4 108 aa5.94□□□□□ -1.46
SYNE2-211ENST00000553801 KRTAP4-7Q9BYR0 210 aa5.9□□□□□ -1.46
SYNE2-211ENST00000553801 A0A1B0GU69 56 aa5.89□□□□□ -1.47
SYNE2-211ENST00000553801 UQCR11O14957 56 aa5.89□□□□□ -1.47
SYNE2-211ENST00000553801 A8MU10 97 aa5.87□□□□□ -1.47
SYNE2-211ENST00000553801 KRTAP19-4Q3LI73 84 aa5.87□□□□□ -1.47
SYNE2-211ENST00000553801 KRTAP12-4P60329 112 aa5.86□□□□□ -1.47
SYNE2-211ENST00000553801 KRTAP5-5Q701N2 237 aaPredicted RBP5.84□□□□□ -1.47
SYNE2-211ENST00000553801 MIR22HGQ0VDD5 57 aa5.81□□□□□ -1.48
SYNE2-211ENST00000553801 KRTAP12-3P60328 96 aa5.8□□□□□ -1.48
SYNE2-211ENST00000553801 H3BS24 57 aa5.78□□□□□ -1.48
SYNE2-211ENST00000553801 SYNE1Q8NF91 8797 aaKnown RBP5.67□□□□□ -1.5
SYNE2-211ENST00000553801 K7ERS5 55 aa5.6□□□□□ -1.51
SYNE2-211ENST00000553801 PRAC1Q96KF2 57 aa5.58□□□□□ -1.52
SYNE2-211ENST00000553801 KRTAP4-11Q9BYQ6 195 aa5.58□□□□□ -1.52
SYNE2-211ENST00000553801 KRTAP4-2Q9BYR5 136 aa5.56□□□□□ -1.52
SYNE2-211ENST00000553801 KRTAP25-1Q3LHN0 102 aa5.51□□□□□ -1.53
SYNE2-211ENST00000553801 KRTAP5-2Q701N4 177 aa5.43□□□□□ -1.54
SYNE2-211ENST00000553801 AHNAKQ09666 5890 aaKnown RBP5.43□□□□□ -1.54
SYNE2-211ENST00000553801 ROMO1P60602 79 aa5.41□□□□□ -1.54
SYNE2-211ENST00000553801 KRTAP5-8O75690 187 aa5.38□□□□□ -1.55
SYNE2-211ENST00000553801 MUC5ACP98088 5654 aa5.37□□□□□ -1.55
SYNE2-211ENST00000553801 MUC5BQ9HC84 5762 aaPredicted RBP5.36□□□□□ -1.55
SYNE2-211ENST00000553801 MT1AP04731 61 aa5.32□□□□□ -1.56
SYNE2-211ENST00000553801 KRTAP6-1Q3LI64 71 aa5.3□□□□□ -1.56
SYNE2-211ENST00000553801 LCE3CQ5T5A8 94 aa5.29□□□□□ -1.56
SYNE2-211ENST00000553801 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
SYNE2-211ENST00000553801 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
SYNE2-211ENST00000553801 KRTAP6-2Q3LI66 62 aa5.16□□□□□ -1.58
SYNE2-211ENST00000553801 OBSCNQ5VST9 7968 aa5.12□□□□□ -1.59
SYNE2-211ENST00000553801 KRTAP9-6A8MVA2 160 aa4.95□□□□□ -1.62
SYNE2-211ENST00000553801 KRTAP5-1Q6L8H4 278 aa4.95□□□□□ -1.62
SYNE2-211ENST00000553801 MT3P25713 68 aa4.92□□□□□ -1.62
SYNE2-211ENST00000553801 NDUFAF8A1L188 74 aa4.87□□□□□ -1.63
SYNE2-211ENST00000553801 A0A0A0MQY5 61 aa4.73□□□□□ -1.65
SYNE2-211ENST00000553801 LUZP6Q538Z0 58 aa4.73□□□□□ -1.65
SYNE2-211ENST00000553801 LCE1EQ5T753 118 aa4.62□□□□□ -1.67
SYNE2-211ENST00000553801 LCE1BQ5T7P3 118 aa4.37□□□□□ -1.71
SYNE2-211ENST00000553801 INE1O15225 51 aa4.31□□□□□ -1.72
SYNE2-211ENST00000553801 LCE1CQ5T751 118 aa4.28□□□□□ -1.72
SYNE2-211ENST00000553801 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
SYNE2-211ENST00000553801 KRTAP5-11Q6L8G4 156 aa3.93□□□□□ -1.78
SYNE2-211ENST00000553801 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
SYNE2-211ENST00000553801 PHGR1C9JFL3 82 aa3.75□□□□□ -1.81
SYNE2-211ENST00000553801 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
SYNE2-211ENST00000553801 KRTAP21-2Q3LI59 83 aa3.49□□□□□ -1.85
SYNE2-211ENST00000553801 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
SYNE2-211ENST00000553801 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
SYNE2-211ENST00000553801 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
SYNE2-211ENST00000553801 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
SYNE2-211ENST00000553801 PRM1P04553 51 aa2.74□□□□□ -1.97
SYNE2-211ENST00000553801 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 59 ms