RNA–Protein interactions for RNA: ENST00000553727.1

SV2B-204, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 4

Gene SV2B, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-204ENST00000553727 SPRR2DP22532 72 aa5.27□□□□□ -1.57
SV2B-204ENST00000553727 CDC42SE1Q9NRR8 79 aa5.24□□□□□ -1.57
SV2B-204ENST00000553727 KRTAP25-1Q3LHN0 102 aa5.23□□□□□ -1.57
SV2B-204ENST00000553727 KRTAP19-3Q7Z4W3 81 aa5.19□□□□□ -1.58
SV2B-204ENST00000553727 LCE5AQ5TCM9 118 aa5.15□□□□□ -1.59
SV2B-204ENST00000553727 ROMO1P60602 79 aa5.11□□□□□ -1.59
SV2B-204ENST00000553727 LCE3BQ5TA77 95 aa5.11□□□□□ -1.59
SV2B-204ENST00000553727 KRTAP12-3P60328 96 aa5.1□□□□□ -1.59
SV2B-204ENST00000553727 MT1GP13640 62 aa5.09□□□□□ -1.59
SV2B-204ENST00000553727 MT1LQ93083 61 aa5.09□□□□□ -1.59
SV2B-204ENST00000553727 PP632Q6XCG6 107 aa5.06□□□□□ -1.6
SV2B-204ENST00000553727 LOC100996750A0A140TA64 210 aa5.05□□□□□ -1.6
SV2B-204ENST00000553727 KRTAP4-6Q9BYQ5 205 aa5.05□□□□□ -1.6
SV2B-204ENST00000553727 GPR98Q8WXG9 6306 aa5.04□□□□□ -1.6
SV2B-204ENST00000553727 KRTAP23-1A1A580 65 aa5.03□□□□□ -1.6
SV2B-204ENST00000553727 MT1MQ8N339 61 aa5.01□□□□□ -1.61
SV2B-204ENST00000553727 BRK1Q8WUW1 75 aa4.99□□□□□ -1.61
SV2B-204ENST00000553727 KRTAP19-4Q3LI73 84 aa4.97□□□□□ -1.61
SV2B-204ENST00000553727 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
SV2B-204ENST00000553727 KRTAP4-7Q9BYR0 210 aa4.89□□□□□ -1.63
SV2B-204ENST00000553727 DSTQ03001 7570 aaKnown RBP4.86□□□□□ -1.63
SV2B-204ENST00000553727 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
SV2B-204ENST00000553727 KRTAP4-9Q9BYQ8 210 aa4.82□□□□□ -1.64
SV2B-204ENST00000553727 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
SV2B-204ENST00000553727 PMAIP1Q13794 54 aa4.7□□□□□ -1.66
SV2B-204ENST00000553727 LCE4AQ5TA78 99 aa4.65□□□□□ -1.67
SV2B-204ENST00000553727 A0A0A0MQY5 61 aa4.63□□□□□ -1.67
SV2B-204ENST00000553727 MT4P47944 62 aa4.62□□□□□ -1.67
SV2B-204ENST00000553727 LCE1DQ5T752 114 aa4.62□□□□□ -1.67
SV2B-204ENST00000553727 KRTAP5-4Q6L8H1 288 aa4.6□□□□□ -1.67
SV2B-204ENST00000553727 KRTAP5-5Q701N2 237 aaPredicted RBP4.54□□□□□ -1.68
SV2B-204ENST00000553727 PRO0628Q9UI54 55 aa4.54□□□□□ -1.68
SV2B-204ENST00000553727 KRTAP5-10Q6L8G5 202 aa4.53□□□□□ -1.68
SV2B-204ENST00000553727 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
SV2B-204ENST00000553727 KRTAP4-12Q9BQ66 201 aa4.51□□□□□ -1.69
SV2B-204ENST00000553727 AHNAK2Q8IVF2 5795 aa4.51□□□□□ -1.69
SV2B-204ENST00000553727 PRAC1Q96KF2 57 aa4.47□□□□□ -1.69
SV2B-204ENST00000553727 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
SV2B-204ENST00000553727 KRTAP5-7Q6L8G8 165 aa4.42□□□□□ -1.7
SV2B-204ENST00000553727 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
SV2B-204ENST00000553727 SPRR5A0A1B0GTR4 108 aa4.35□□□□□ -1.71
SV2B-204ENST00000553727 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.71
SV2B-204ENST00000553727 MT1AP04731 61 aa4.33□□□□□ -1.72
SV2B-204ENST00000553727 KRTAP5-3Q6L8H2 238 aa4.32□□□□□ -1.72
SV2B-204ENST00000553727 KRTAP6-1Q3LI64 71 aa4.3□□□□□ -1.72
SV2B-204ENST00000553727 KTN1-AS1Q86SY8 53 aa4.29□□□□□ -1.72
SV2B-204ENST00000553727 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
SV2B-204ENST00000553727 KRTAP9-4Q9BYQ2 154 aa4.28□□□□□ -1.72
SV2B-204ENST00000553727 SYNE1Q8NF91 8797 aaKnown RBP4.27□□□□□ -1.73
SV2B-204ENST00000553727 KRTAP6-2Q3LI66 62 aa4.07□□□□□ -1.76
SV2B-204ENST00000553727 KRTAP5-2Q701N4 177 aa4.07□□□□□ -1.76
SV2B-204ENST00000553727 MT3P25713 68 aa3.96□□□□□ -1.78
SV2B-204ENST00000553727 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
SV2B-204ENST00000553727 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
SV2B-204ENST00000553727 AHNAKQ09666 5890 aaKnown RBP3.8□□□□□ -1.8
SV2B-204ENST00000553727 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
SV2B-204ENST00000553727 MUC5BQ9HC84 5762 aaPredicted RBP3.78□□□□□ -1.8
SV2B-204ENST00000553727 KRTAP5-8O75690 187 aa3.77□□□□□ -1.81
SV2B-204ENST00000553727 LUZP6Q538Z0 58 aa3.74□□□□□ -1.81
SV2B-204ENST00000553727 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
SV2B-204ENST00000553727 NDUFAF8A1L188 74 aa3.65□□□□□ -1.83
SV2B-204ENST00000553727 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
SV2B-204ENST00000553727 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
SV2B-204ENST00000553727 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.86
SV2B-204ENST00000553727 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
SV2B-204ENST00000553727 LCE3EQ5T5B0 92 aa3.3□□□□□ -1.88
SV2B-204ENST00000553727 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
SV2B-204ENST00000553727 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
SV2B-204ENST00000553727 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
SV2B-204ENST00000553727 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
SV2B-204ENST00000553727 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
SV2B-204ENST00000553727 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
SV2B-204ENST00000553727 PRM1P04553 51 aa2.64□□□□□ -1.99
SV2B-204ENST00000553727 INE1O15225 51 aa2.63□□□□□ -1.99
SV2B-204ENST00000553727 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
SV2B-204ENST00000553727 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
SV2B-204ENST00000553727 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
SV2B-204ENST00000553727 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 53.4 ms