RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 KRTAP5-9P26371 169 aa3.62□□□□□ -1.83
CHD8-204ENST00000553622 KTN1-AS1Q86SY8 53 aa3.62□□□□□ -1.83
CHD8-204ENST00000553622 KRTAP4-7Q9BYR0 210 aa3.62□□□□□ -1.83
CHD8-204ENST00000553622 KRTAP12-3P60328 96 aa3.61□□□□□ -1.83
CHD8-204ENST00000553622 KRTAP19-7Q3SYF9 63 aa3.61□□□□□ -1.83
CHD8-204ENST00000553622 MT1EP04732 61 aa3.58□□□□□ -1.84
CHD8-204ENST00000553622 SPRR2EP22531 72 aa3.55□□□□□ -1.84
CHD8-204ENST00000553622 SPRR2BP35325 72 aa3.55□□□□□ -1.84
CHD8-204ENST00000553622 SPRR2AP35326 72 aa3.55□□□□□ -1.84
CHD8-204ENST00000553622 LCE1DQ5T752 114 aa3.51□□□□□ -1.85
CHD8-204ENST00000553622 LCE1AQ5T7P2 110 aa3.5□□□□□ -1.85
CHD8-204ENST00000553622 KRTAP15-1Q3LI76 137 aa3.49□□□□□ -1.85
CHD8-204ENST00000553622 MUC12Q9UKN1 5478 aa3.48□□□□□ -1.85
CHD8-204ENST00000553622 KRTAP19-3Q7Z4W3 81 aa3.48□□□□□ -1.85
CHD8-204ENST00000553622 MT1LQ93083 61 aa3.48□□□□□ -1.85
CHD8-204ENST00000553622 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
CHD8-204ENST00000553622 KRTAP4-9Q9BYQ8 210 aa3.46□□□□□ -1.86
CHD8-204ENST00000553622 MT1GP13640 62 aa3.43□□□□□ -1.86
CHD8-204ENST00000553622 SPRR2DP22532 72 aa3.42□□□□□ -1.86
CHD8-204ENST00000553622 LCE5AQ5TCM9 118 aa3.42□□□□□ -1.86
CHD8-204ENST00000553622 MT1MQ8N339 61 aa3.39□□□□□ -1.87
CHD8-204ENST00000553622 MDN1Q9NU22 5596 aa3.37□□□□□ -1.87
CHD8-204ENST00000553622 NEBP20929 6669 aa3.36□□□□□ -1.87
CHD8-204ENST00000553622 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
CHD8-204ENST00000553622 KRTAP19-4Q3LI73 84 aa3.33□□□□□ -1.88
CHD8-204ENST00000553622 KRTAP4-3Q9BYR4 195 aa3.33□□□□□ -1.88
CHD8-204ENST00000553622 KRTAP5-3Q6L8H2 238 aa3.32□□□□□ -1.88
CHD8-204ENST00000553622 KRTAP4-11Q9BYQ6 195 aa3.29□□□□□ -1.88
CHD8-204ENST00000553622 KRTAP20-1Q3LI63 56 aa3.28□□□□□ -1.88
CHD8-204ENST00000553622 KRTAP2-3P0C7H8 128 aa3.26□□□□□ -1.89
CHD8-204ENST00000553622 KRTAP2-4Q9BYR9 128 aa3.26□□□□□ -1.89
CHD8-204ENST00000553622 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
CHD8-204ENST00000553622 KRTAP2-1Q9BYU5 128 aa3.17□□□□□ -1.9
CHD8-204ENST00000553622 DSTQ03001 7570 aaKnown RBP3.14□□□□□ -1.91
CHD8-204ENST00000553622 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
CHD8-204ENST00000553622 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
CHD8-204ENST00000553622 SPRR5A0A1B0GTR4 108 aa3.11□□□□□ -1.91
CHD8-204ENST00000553622 LCE4AQ5TA78 99 aa3.05□□□□□ -1.92
CHD8-204ENST00000553622 KRTAP5-5Q701N2 237 aaPredicted RBP3.03□□□□□ -1.92
CHD8-204ENST00000553622 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
CHD8-204ENST00000553622 MT4P47944 62 aa2.99□□□□□ -1.93
CHD8-204ENST00000553622 KRTAP5-4Q6L8H1 288 aa2.98□□□□□ -1.93
CHD8-204ENST00000553622 MT1AP04731 61 aa2.97□□□□□ -1.93
CHD8-204ENST00000553622 KRTAP6-1Q3LI64 71 aa2.95□□□□□ -1.94
CHD8-204ENST00000553622 KRTAP12-4P60329 112 aa2.92□□□□□ -1.94
CHD8-204ENST00000553622 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
CHD8-204ENST00000553622 KRTAP20-2Q3LI61 65 aa2.82□□□□□ -1.96
CHD8-204ENST00000553622 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
CHD8-204ENST00000553622 SYNE1Q8NF91 8797 aaKnown RBP2.79□□□□□ -1.96
CHD8-204ENST00000553622 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
CHD8-204ENST00000553622 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
CHD8-204ENST00000553622 MT3P25713 68 aa2.7□□□□□ -1.98
CHD8-204ENST00000553622 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
CHD8-204ENST00000553622 AHNAK2Q8IVF2 5795 aa2.56□□□□□ -2
CHD8-204ENST00000553622 KRTAP5-10Q6L8G5 202 aa2.51□□□□□ -2.01
CHD8-204ENST00000553622 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
CHD8-204ENST00000553622 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
CHD8-204ENST00000553622 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
CHD8-204ENST00000553622 OBSCNQ5VST9 7968 aa2.4□□□□□ -2.03
CHD8-204ENST00000553622 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
CHD8-204ENST00000553622 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
CHD8-204ENST00000553622 LCE1EQ5T753 118 aa2.35□□□□□ -2.03
CHD8-204ENST00000553622 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
CHD8-204ENST00000553622 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
CHD8-204ENST00000553622 INE1O15225 51 aa2.28□□□□□ -2.04
CHD8-204ENST00000553622 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
CHD8-204ENST00000553622 LCE1CQ5T751 118 aa2.19□□□□□ -2.06
CHD8-204ENST00000553622 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
CHD8-204ENST00000553622 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
CHD8-204ENST00000553622 MUC5BQ9HC84 5762 aaPredicted RBP2.11□□□□□ -2.07
CHD8-204ENST00000553622 LCE1FQ5T754 118 aa2.07□□□□□ -2.08
CHD8-204ENST00000553622 PRM1P04553 51 aa2.03□□□□□ -2.08
CHD8-204ENST00000553622 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
CHD8-204ENST00000553622 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
CHD8-204ENST00000553622 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
CHD8-204ENST00000553622 MUC19Q7Z5P9 8384 aa1.43□□□□□ -2.18
CHD8-204ENST00000553622 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
CHD8-204ENST00000553622 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 68.5 ms