RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 KRTAP5-4Q6L8H1 288 aa4.65□□□□□ -1.67
SIX1-202ENST00000553535 MT1EP04732 61 aa4.64□□□□□ -1.67
SIX1-202ENST00000553535 KRTAP19-3Q7Z4W3 81 aa4.63□□□□□ -1.67
SIX1-202ENST00000553535 SPANXA2-OT1Q8N9U9 137 aa4.62□□□□□ -1.67
SIX1-202ENST00000553535 PRO0628Q9UI54 55 aa4.62□□□□□ -1.67
SIX1-202ENST00000553535 KRTAP4-4Q9BYR3 166 aa4.56□□□□□ -1.68
SIX1-202ENST00000553535 A0A0D9SG42 100 aa4.53□□□□□ -1.69
SIX1-202ENST00000553535 MT1GP13640 62 aa4.52□□□□□ -1.69
SIX1-202ENST00000553535 Q1T7F1 81 aa4.52□□□□□ -1.69
SIX1-202ENST00000553535 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
SIX1-202ENST00000553535 COA5Q86WW8 74 aa4.49□□□□□ -1.69
SIX1-202ENST00000553535 SPATA8Q6RVD6 105 aa4.48□□□□□ -1.69
SIX1-202ENST00000553535 BRK1Q8WUW1 75 aa4.48□□□□□ -1.69
SIX1-202ENST00000553535 SEC61GP60059 68 aa4.47□□□□□ -1.69
SIX1-202ENST00000553535 SPINT4Q6UDR6 99 aa4.46□□□□□ -1.7
SIX1-202ENST00000553535 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
SIX1-202ENST00000553535 KRTAP12-1P59990 96 aa4.44□□□□□ -1.7
SIX1-202ENST00000553535 PP632Q6XCG6 107 aa4.44□□□□□ -1.7
SIX1-202ENST00000553535 V9GYY9 64 aa4.44□□□□□ -1.7
SIX1-202ENST00000553535 A0A1B0GU33 70 aa4.44□□□□□ -1.7
SIX1-202ENST00000553535 MT1MQ8N339 61 aa4.43□□□□□ -1.7
SIX1-202ENST00000553535 MT1LQ93083 61 aa4.4□□□□□ -1.7
SIX1-202ENST00000553535 MT4P47944 62 aa4.39□□□□□ -1.71
SIX1-202ENST00000553535 AHNAK2Q8IVF2 5795 aa4.38□□□□□ -1.71
SIX1-202ENST00000553535 PSPHP1O15172 72 aa4.37□□□□□ -1.71
SIX1-202ENST00000553535 PMAIP1Q13794 54 aa4.34□□□□□ -1.71
SIX1-202ENST00000553535 KRTAP4-3Q9BYR4 195 aa4.34□□□□□ -1.71
SIX1-202ENST00000553535 LCE3AQ5TA76 89 aa4.31□□□□□ -1.72
SIX1-202ENST00000553535 C10orf95Q9H7T3 257 aa4.31□□□□□ -1.72
SIX1-202ENST00000553535 PRR15LQ9BU68 103 aa4.29□□□□□ -1.72
SIX1-202ENST00000553535 LINC01558Q9Y6Z2 57 aa4.29□□□□□ -1.72
SIX1-202ENST00000553535 A8MU10 97 aa4.28□□□□□ -1.72
SIX1-202ENST00000553535 TNP1P09430 55 aa4.27□□□□□ -1.73
SIX1-202ENST00000553535 MT3P25713 68 aa4.27□□□□□ -1.73
SIX1-202ENST00000553535 A0A1B0GU69 56 aa4.26□□□□□ -1.73
SIX1-202ENST00000553535 KRTAP5-10Q6L8G5 202 aa4.25□□□□□ -1.73
SIX1-202ENST00000553535 CDC42SE1Q9NRR8 79 aa4.24□□□□□ -1.73
SIX1-202ENST00000553535 A6NED7 52 aa4.23□□□□□ -1.73
SIX1-202ENST00000553535 KTN1-AS1Q86SY8 53 aa4.21□□□□□ -1.74
SIX1-202ENST00000553535 KRTAP12-3P60328 96 aa4.14□□□□□ -1.75
SIX1-202ENST00000553535 KRTAP9-6A8MVA2 160 aa4.14□□□□□ -1.75
SIX1-202ENST00000553535 KRTAP5-7Q6L8G8 165 aa4.1□□□□□ -1.75
SIX1-202ENST00000553535 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.75
SIX1-202ENST00000553535 KRTAP5-5Q701N2 237 aaPredicted RBP4.09□□□□□ -1.75
SIX1-202ENST00000553535 OBSCNQ5VST9 7968 aa4.08□□□□□ -1.76
SIX1-202ENST00000553535 SPRR5A0A1B0GTR4 108 aa4.06□□□□□ -1.76
SIX1-202ENST00000553535 UQCR11O14957 56 aa4.02□□□□□ -1.77
SIX1-202ENST00000553535 SYNE1Q8NF91 8797 aaKnown RBP4.01□□□□□ -1.77
SIX1-202ENST00000553535 MIR22HGQ0VDD5 57 aa4.01□□□□□ -1.77
SIX1-202ENST00000553535 KRTAP12-4P60329 112 aa4□□□□□ -1.77
SIX1-202ENST00000553535 PRAC1Q96KF2 57 aa3.95□□□□□ -1.78
SIX1-202ENST00000553535 KRTAP25-1Q3LHN0 102 aa3.94□□□□□ -1.78
SIX1-202ENST00000553535 KRTAP5-2Q701N4 177 aa3.9□□□□□ -1.78
SIX1-202ENST00000553535 LCE3CQ5T5A8 94 aa3.81□□□□□ -1.8
SIX1-202ENST00000553535 K7ERS5 55 aa3.78□□□□□ -1.8
SIX1-202ENST00000553535 MT1AP04731 61 aa3.75□□□□□ -1.81
SIX1-202ENST00000553535 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
SIX1-202ENST00000553535 ROMO1P60602 79 aa3.67□□□□□ -1.82
SIX1-202ENST00000553535 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
SIX1-202ENST00000553535 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.82
SIX1-202ENST00000553535 MUC5BQ9HC84 5762 aaPredicted RBP3.62□□□□□ -1.83
SIX1-202ENST00000553535 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
SIX1-202ENST00000553535 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
SIX1-202ENST00000553535 A0A0A0MQY5 61 aa3.54□□□□□ -1.84
SIX1-202ENST00000553535 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
SIX1-202ENST00000553535 NDUFAF8A1L188 74 aa3.35□□□□□ -1.87
SIX1-202ENST00000553535 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
SIX1-202ENST00000553535 LCE1BQ5T7P3 118 aa3.17□□□□□ -1.9
SIX1-202ENST00000553535 LUZP6Q538Z0 58 aa3.12□□□□□ -1.91
SIX1-202ENST00000553535 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
SIX1-202ENST00000553535 INE1O15225 51 aa2.79□□□□□ -1.96
SIX1-202ENST00000553535 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
SIX1-202ENST00000553535 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
SIX1-202ENST00000553535 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
SIX1-202ENST00000553535 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
SIX1-202ENST00000553535 PRM1P04553 51 aa1.94□□□□□ -2.1
SIX1-202ENST00000553535 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
SIX1-202ENST00000553535 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 51.4 ms