RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 KRTAP19-6Q3LI70 58 aa3.6□□□□□ -1.83
MTHFD1-203ENST00000553391 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
MTHFD1-203ENST00000553391 SSPOA2VEC9 5147 aa3.56□□□□□ -1.84
MTHFD1-203ENST00000553391 SPRR5A0A1B0GTR4 108 aa3.54□□□□□ -1.84
MTHFD1-203ENST00000553391 KRTAP19-5Q3LI72 72 aa3.51□□□□□ -1.85
MTHFD1-203ENST00000553391 CRCT1Q9UGL9 99 aa3.5□□□□□ -1.85
MTHFD1-203ENST00000553391 FSIP2Q5CZC0 6907 aa3.46□□□□□ -1.86
MTHFD1-203ENST00000553391 KRTAP19-7Q3SYF9 63 aa3.45□□□□□ -1.86
MTHFD1-203ENST00000553391 NDUFAF8A1L188 74 aa3.44□□□□□ -1.86
MTHFD1-203ENST00000553391 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
MTHFD1-203ENST00000553391 KMT2DO14686 5537 aa3.39□□□□□ -1.87
MTHFD1-203ENST00000553391 MT1EP04732 61 aa3.37□□□□□ -1.87
MTHFD1-203ENST00000553391 FCGBPQ9Y6R7 5405 aaPredicted RBP3.36□□□□□ -1.87
MTHFD1-203ENST00000553391 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
MTHFD1-203ENST00000553391 MT1LQ93083 61 aa3.32□□□□□ -1.88
MTHFD1-203ENST00000553391 MT1GP13640 62 aa3.21□□□□□ -1.9
MTHFD1-203ENST00000553391 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
MTHFD1-203ENST00000553391 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
MTHFD1-203ENST00000553391 MT1MQ8N339 61 aa3.16□□□□□ -1.9
MTHFD1-203ENST00000553391 SPRR2FQ96RM1 72 aa3.15□□□□□ -1.91
MTHFD1-203ENST00000553391 KRTAP5-9P26371 169 aa3.12□□□□□ -1.91
MTHFD1-203ENST00000553391 KRTAP4-3Q9BYR4 195 aa3.11□□□□□ -1.91
MTHFD1-203ENST00000553391 SYNE2Q8WXH0 6885 aaKnown RBP3.1□□□□□ -1.91
MTHFD1-203ENST00000553391 MUC12Q9UKN1 5478 aa3.09□□□□□ -1.91
MTHFD1-203ENST00000553391 MACF1Q9UPN3 7388 aaKnown RBP3.06□□□□□ -1.92
MTHFD1-203ENST00000553391 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
MTHFD1-203ENST00000553391 A0A0A0MQY5 61 aa3.04□□□□□ -1.92
MTHFD1-203ENST00000553391 KRTAP2-3P0C7H8 128 aa3.04□□□□□ -1.92
MTHFD1-203ENST00000553391 KRTAP2-4Q9BYR9 128 aa3.04□□□□□ -1.92
MTHFD1-203ENST00000553391 KRTAP2-1Q9BYU5 128 aa3.04□□□□□ -1.92
MTHFD1-203ENST00000553391 KRTAP6-3Q3LI67 103 aa3.03□□□□□ -1.92
MTHFD1-203ENST00000553391 NEBP20929 6669 aa3□□□□□ -1.93
MTHFD1-203ENST00000553391 SPRR2EP22531 72 aa2.96□□□□□ -1.94
MTHFD1-203ENST00000553391 SPRR2BP35325 72 aa2.96□□□□□ -1.94
MTHFD1-203ENST00000553391 SPRR2AP35326 72 aa2.96□□□□□ -1.94
MTHFD1-203ENST00000553391 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
MTHFD1-203ENST00000553391 MDN1Q9NU22 5596 aa2.9□□□□□ -1.95
MTHFD1-203ENST00000553391 INE1O15225 51 aa2.87□□□□□ -1.95
MTHFD1-203ENST00000553391 SPRR2DP22532 72 aa2.85□□□□□ -1.95
MTHFD1-203ENST00000553391 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
MTHFD1-203ENST00000553391 MT1AP04731 61 aa2.83□□□□□ -1.96
MTHFD1-203ENST00000553391 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
MTHFD1-203ENST00000553391 GPR98Q8WXG9 6306 aa2.82□□□□□ -1.96
MTHFD1-203ENST00000553391 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
MTHFD1-203ENST00000553391 KRTAP6-1Q3LI64 71 aa2.8□□□□□ -1.96
MTHFD1-203ENST00000553391 DSTQ03001 7570 aaKnown RBP2.76□□□□□ -1.97
MTHFD1-203ENST00000553391 KRTAP2-2Q9BYT5 123 aa2.73□□□□□ -1.97
MTHFD1-203ENST00000553391 SYNE1Q8NF91 8797 aaKnown RBP2.71□□□□□ -1.98
MTHFD1-203ENST00000553391 KRTAP5-4Q6L8H1 288 aa2.67□□□□□ -1.98
MTHFD1-203ENST00000553391 LCE1EQ5T753 118 aa2.63□□□□□ -1.99
MTHFD1-203ENST00000553391 KRTAP12-4P60329 112 aa2.58□□□□□ -2
MTHFD1-203ENST00000553391 MT3P25713 68 aa2.56□□□□□ -2
MTHFD1-203ENST00000553391 KRTAP6-2Q3LI66 62 aa2.54□□□□□ -2
MTHFD1-203ENST00000553391 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
MTHFD1-203ENST00000553391 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
MTHFD1-203ENST00000553391 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
MTHFD1-203ENST00000553391 MT4P47944 62 aa2.46□□□□□ -2.02
MTHFD1-203ENST00000553391 KRTAP20-2Q3LI61 65 aa2.46□□□□□ -2.02
MTHFD1-203ENST00000553391 KRTAP5-2Q701N4 177 aa2.44□□□□□ -2.02
MTHFD1-203ENST00000553391 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
MTHFD1-203ENST00000553391 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
MTHFD1-203ENST00000553391 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
MTHFD1-203ENST00000553391 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
MTHFD1-203ENST00000553391 OBSCNQ5VST9 7968 aa2.31□□□□□ -2.04
MTHFD1-203ENST00000553391 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
MTHFD1-203ENST00000553391 PRM1P04553 51 aa2.22□□□□□ -2.05
MTHFD1-203ENST00000553391 LCE1FQ5T754 118 aa2.19□□□□□ -2.06
MTHFD1-203ENST00000553391 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
MTHFD1-203ENST00000553391 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
MTHFD1-203ENST00000553391 MUC5ACP98088 5654 aa2.05□□□□□ -2.08
MTHFD1-203ENST00000553391 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
MTHFD1-203ENST00000553391 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
MTHFD1-203ENST00000553391 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
MTHFD1-203ENST00000553391 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
MTHFD1-203ENST00000553391 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
MTHFD1-203ENST00000553391 MUC19Q7Z5P9 8384 aa1.46□□□□□ -2.18
MTHFD1-203ENST00000553391 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
MTHFD1-203ENST00000553391 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 76.3 ms