RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 COA5Q86WW8 74 aa3.94□□□□□ -1.78
ACTN1-208ENST00000553370 A8MU10 97 aa3.93□□□□□ -1.78
ACTN1-208ENST00000553370 CHKB-CPT1BH3BT56 60 aa3.92□□□□□ -1.78
ACTN1-208ENST00000553370 PRO0628Q9UI54 55 aa3.87□□□□□ -1.79
ACTN1-208ENST00000553370 LCE3CQ5T5A8 94 aa3.86□□□□□ -1.79
ACTN1-208ENST00000553370 GPR98Q8WXG9 6306 aa3.84□□□□□ -1.79
ACTN1-208ENST00000553370 Q1T7F1 81 aa3.83□□□□□ -1.8
ACTN1-208ENST00000553370 LINC01558Q9Y6Z2 57 aa3.81□□□□□ -1.8
ACTN1-208ENST00000553370 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
ACTN1-208ENST00000553370 PRR15LQ9BU68 103 aa3.76□□□□□ -1.81
ACTN1-208ENST00000553370 A0A1B0GU69 56 aa3.75□□□□□ -1.81
ACTN1-208ENST00000553370 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
ACTN1-208ENST00000553370 DSTQ03001 7570 aaKnown RBP3.73□□□□□ -1.81
ACTN1-208ENST00000553370 KRTAP19-3Q7Z4W3 81 aa3.71□□□□□ -1.82
ACTN1-208ENST00000553370 KRTAP13-4Q3LI77 160 aa3.7□□□□□ -1.82
ACTN1-208ENST00000553370 A0A0D9SG42 100 aa3.69□□□□□ -1.82
ACTN1-208ENST00000553370 MT1EP04732 61 aa3.69□□□□□ -1.82
ACTN1-208ENST00000553370 A0A1B0GU33 70 aa3.67□□□□□ -1.82
ACTN1-208ENST00000553370 KRTAP19-7Q3SYF9 63 aa3.67□□□□□ -1.82
ACTN1-208ENST00000553370 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
ACTN1-208ENST00000553370 SPINT4Q6UDR6 99 aa3.66□□□□□ -1.82
ACTN1-208ENST00000553370 UQCR11O14957 56 aa3.65□□□□□ -1.83
ACTN1-208ENST00000553370 PP632Q6XCG6 107 aa3.65□□□□□ -1.83
ACTN1-208ENST00000553370 MT4P47944 62 aa3.61□□□□□ -1.83
ACTN1-208ENST00000553370 A6NED7 52 aa3.6□□□□□ -1.83
ACTN1-208ENST00000553370 KRTAP19-5Q3LI72 72 aa3.6□□□□□ -1.83
ACTN1-208ENST00000553370 SPATA8Q6RVD6 105 aa3.6□□□□□ -1.83
ACTN1-208ENST00000553370 HMCN1Q96RW7 5635 aa3.6□□□□□ -1.83
ACTN1-208ENST00000553370 MT1GP13640 62 aa3.59□□□□□ -1.83
ACTN1-208ENST00000553370 MIR22HGQ0VDD5 57 aa3.58□□□□□ -1.84
ACTN1-208ENST00000553370 K7ERS5 55 aa3.57□□□□□ -1.84
ACTN1-208ENST00000553370 CDC42SE1Q9NRR8 79 aa3.56□□□□□ -1.84
ACTN1-208ENST00000553370 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
ACTN1-208ENST00000553370 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.84
ACTN1-208ENST00000553370 MT1MQ8N339 61 aa3.53□□□□□ -1.84
ACTN1-208ENST00000553370 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
ACTN1-208ENST00000553370 KRTAP12-1P59990 96 aa3.51□□□□□ -1.85
ACTN1-208ENST00000553370 BRK1Q8WUW1 75 aa3.5□□□□□ -1.85
ACTN1-208ENST00000553370 MT1LQ93083 61 aa3.5□□□□□ -1.85
ACTN1-208ENST00000553370 C10orf95Q9H7T3 257 aa3.47□□□□□ -1.85
ACTN1-208ENST00000553370 TNP1P09430 55 aa3.46□□□□□ -1.86
ACTN1-208ENST00000553370 LCE3AQ5TA76 89 aa3.45□□□□□ -1.86
ACTN1-208ENST00000553370 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
ACTN1-208ENST00000553370 KRTAP5-10Q6L8G5 202 aa3.4□□□□□ -1.87
ACTN1-208ENST00000553370 KRTAP5-4Q6L8H1 288 aa3.4□□□□□ -1.87
ACTN1-208ENST00000553370 KRTAP9-6A8MVA2 160 aa3.35□□□□□ -1.87
ACTN1-208ENST00000553370 PMAIP1Q13794 54 aa3.35□□□□□ -1.87
ACTN1-208ENST00000553370 KRTAP12-3P60328 96 aa3.32□□□□□ -1.88
ACTN1-208ENST00000553370 KRTAP25-1Q3LHN0 102 aa3.31□□□□□ -1.88
ACTN1-208ENST00000553370 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
ACTN1-208ENST00000553370 ROMO1P60602 79 aa3.29□□□□□ -1.88
ACTN1-208ENST00000553370 SPRR5A0A1B0GTR4 108 aa3.27□□□□□ -1.89
ACTN1-208ENST00000553370 KRTAP12-4P60329 112 aa3.27□□□□□ -1.89
ACTN1-208ENST00000553370 KRTAP20-2Q3LI61 65 aa3.27□□□□□ -1.89
ACTN1-208ENST00000553370 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
ACTN1-208ENST00000553370 KTN1-AS1Q86SY8 53 aa3.17□□□□□ -1.9
ACTN1-208ENST00000553370 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
ACTN1-208ENST00000553370 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
ACTN1-208ENST00000553370 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
ACTN1-208ENST00000553370 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
ACTN1-208ENST00000553370 MT1AP04731 61 aa2.98□□□□□ -1.93
ACTN1-208ENST00000553370 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
ACTN1-208ENST00000553370 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
ACTN1-208ENST00000553370 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
ACTN1-208ENST00000553370 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
ACTN1-208ENST00000553370 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
ACTN1-208ENST00000553370 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
ACTN1-208ENST00000553370 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
ACTN1-208ENST00000553370 OBSCNQ5VST9 7968 aa2.79□□□□□ -1.96
ACTN1-208ENST00000553370 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
ACTN1-208ENST00000553370 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
ACTN1-208ENST00000553370 INE1O15225 51 aa2.23□□□□□ -2.05
ACTN1-208ENST00000553370 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
ACTN1-208ENST00000553370 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
ACTN1-208ENST00000553370 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
ACTN1-208ENST00000553370 PRM1P04553 51 aa1.67□□□□□ -2.14
ACTN1-208ENST00000553370 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
ACTN1-208ENST00000553370 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 90 ms