RNA–Protein interactions for RNA: ENST00000553200.1

NR4A1-218, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-218ENST00000553200 KRTAP2-2Q9BYT5 123 aa8.7□□□□□ -1.02
NR4A1-218ENST00000553200 KRTAP2-1Q9BYU5 128 aa8.7□□□□□ -1.02
NR4A1-218ENST00000553200 MT1LQ93083 61 aa8.61□□□□□ -1.03
NR4A1-218ENST00000553200 KRTAP25-1Q3LHN0 102 aa8.6□□□□□ -1.03
NR4A1-218ENST00000553200 MT1GP13640 62 aa8.57□□□□□ -1.04
NR4A1-218ENST00000553200 KRTAP12-3P60328 96 aa8.49□□□□□ -1.05
NR4A1-218ENST00000553200 MT1MQ8N339 61 aa8.49□□□□□ -1.05
NR4A1-218ENST00000553200 DSTQ03001 7570 aaKnown RBP8.47□□□□□ -1.05
NR4A1-218ENST00000553200 PP632Q6XCG6 107 aa8.45□□□□□ -1.06
NR4A1-218ENST00000553200 CDC42SE1Q9NRR8 79 aa8.45□□□□□ -1.06
NR4A1-218ENST00000553200 KRTAP4-3Q9BYR4 195 aa8.34□□□□□ -1.07
NR4A1-218ENST00000553200 ROMO1P60602 79 aa8.3□□□□□ -1.08
NR4A1-218ENST00000553200 KRTAP23-1A1A580 65 aa8.27□□□□□ -1.09
NR4A1-218ENST00000553200 KRTAP4-7Q9BYR0 210 aa8.25□□□□□ -1.09
NR4A1-218ENST00000553200 KRTAP4-9Q9BYQ8 210 aa8.05□□□□□ -1.12
NR4A1-218ENST00000553200 KRTAP15-1Q3LI76 137 aa8.04□□□□□ -1.12
NR4A1-218ENST00000553200 LCE4AQ5TA78 99 aa7.93□□□□□ -1.14
NR4A1-218ENST00000553200 KRTAP19-4Q3LI73 84 aa7.92□□□□□ -1.14
NR4A1-218ENST00000553200 BRK1Q8WUW1 75 aa7.91□□□□□ -1.14
NR4A1-218ENST00000553200 LCE1DQ5T752 114 aa7.89□□□□□ -1.15
NR4A1-218ENST00000553200 KRTAP5-4Q6L8H1 288 aa7.89□□□□□ -1.15
NR4A1-218ENST00000553200 LCE3CQ5T5A8 94 aa7.86□□□□□ -1.15
NR4A1-218ENST00000553200 MT4P47944 62 aa7.85□□□□□ -1.15
NR4A1-218ENST00000553200 GPR98Q8WXG9 6306 aa7.82□□□□□ -1.16
NR4A1-218ENST00000553200 LOC100996750A0A140TA64 210 aa7.81□□□□□ -1.16
NR4A1-218ENST00000553200 KRTAP5-5Q701N2 237 aaPredicted RBP7.77□□□□□ -1.17
NR4A1-218ENST00000553200 HMCN1Q96RW7 5635 aa7.73□□□□□ -1.17
NR4A1-218ENST00000553200 KRTAP4-6Q9BYQ5 205 aa7.69□□□□□ -1.18
NR4A1-218ENST00000553200 KRTAP9-6A8MVA2 160 aa7.49□□□□□ -1.21
NR4A1-218ENST00000553200 SYNE1Q8NF91 8797 aaKnown RBP7.43□□□□□ -1.22
NR4A1-218ENST00000553200 KRTAP20-2Q3LI61 65 aa7.43□□□□□ -1.22
NR4A1-218ENST00000553200 PMAIP1Q13794 54 aa7.42□□□□□ -1.22
NR4A1-218ENST00000553200 KRTAP12-4P60329 112 aa7.39□□□□□ -1.23
NR4A1-218ENST00000553200 AHNAK2Q8IVF2 5795 aa7.38□□□□□ -1.23
NR4A1-218ENST00000553200 SPRR5A0A1B0GTR4 108 aa7.37□□□□□ -1.23
NR4A1-218ENST00000553200 MT1AP04731 61 aa7.31□□□□□ -1.24
NR4A1-218ENST00000553200 KRTAP6-1Q3LI64 71 aa7.29□□□□□ -1.24
NR4A1-218ENST00000553200 KRTAP5-3Q6L8H2 238 aa7.21□□□□□ -1.26
NR4A1-218ENST00000553200 KRTAP5-10Q6L8G5 202 aa7.18□□□□□ -1.26
NR4A1-218ENST00000553200 PRAC1Q96KF2 57 aa7.18□□□□□ -1.26
NR4A1-218ENST00000553200 PRO0628Q9UI54 55 aa7.12□□□□□ -1.27
NR4A1-218ENST00000553200 KRTAP9-4Q9BYQ2 154 aa7.03□□□□□ -1.28
NR4A1-218ENST00000553200 KRTAP5-2Q701N4 177 aa6.98□□□□□ -1.29
NR4A1-218ENST00000553200 KRTAP5-7Q6L8G8 165 aa6.92□□□□□ -1.3
NR4A1-218ENST00000553200 KRTAP6-2Q3LI66 62 aa6.88□□□□□ -1.31
NR4A1-218ENST00000553200 KTN1-AS1Q86SY8 53 aa6.76□□□□□ -1.33
NR4A1-218ENST00000553200 KRTAP4-11Q9BYQ6 195 aa6.68□□□□□ -1.34
NR4A1-218ENST00000553200 MT3P25713 68 aa6.63□□□□□ -1.35
NR4A1-218ENST00000553200 KRTAP5-8O75690 187 aa6.47□□□□□ -1.37
NR4A1-218ENST00000553200 SVIPQ8NHG7 77 aa6.44□□□□□ -1.38
NR4A1-218ENST00000553200 OBSCNQ5VST9 7968 aa6.42□□□□□ -1.38
NR4A1-218ENST00000553200 KRTAP5-1Q6L8H4 278 aa6.2□□□□□ -1.42
NR4A1-218ENST00000553200 MUC5ACP98088 5654 aa6.05□□□□□ -1.44
NR4A1-218ENST00000553200 AHNAKQ09666 5890 aaKnown RBP6.05□□□□□ -1.44
NR4A1-218ENST00000553200 KRTAP9-9Q9BYP9 154 aa6.02□□□□□ -1.45
NR4A1-218ENST00000553200 MUC5BQ9HC84 5762 aaPredicted RBP6.02□□□□□ -1.45
NR4A1-218ENST00000553200 LCE1EQ5T753 118 aa5.99□□□□□ -1.45
NR4A1-218ENST00000553200 LUZP6Q538Z0 58 aa5.87□□□□□ -1.47
NR4A1-218ENST00000553200 LCE3DQ9BYE3 92 aa5.71□□□□□ -1.5
NR4A1-218ENST00000553200 KRTAP4-2Q9BYR5 136 aa5.71□□□□□ -1.5
NR4A1-218ENST00000553200 LCE1BQ5T7P3 118 aa5.67□□□□□ -1.5
NR4A1-218ENST00000553200 LCE1CQ5T751 118 aa5.58□□□□□ -1.52
NR4A1-218ENST00000553200 LCE3EQ5T5B0 92 aa5.43□□□□□ -1.54
NR4A1-218ENST00000553200 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.13□□□□□ -1.59
NR4A1-218ENST00000553200 KRTAP4-12Q9BQ66 201 aa5.07□□□□□ -1.6
NR4A1-218ENST00000553200 NDUFAF8A1L188 74 aa5.06□□□□□ -1.6
NR4A1-218ENST00000553200 KRTAP5-11Q6L8G4 156 aa5.04□□□□□ -1.6
NR4A1-218ENST00000553200 KRTAP21-2Q3LI59 83 aa4.79□□□□□ -1.64
NR4A1-218ENST00000553200 LCE1FQ5T754 118 aa4.78□□□□□ -1.64
NR4A1-218ENST00000553200 KRTAP4-4Q9BYR3 166 aa4.37□□□□□ -1.71
NR4A1-218ENST00000553200 PHGR1C9JFL3 82 aa4.35□□□□□ -1.71
NR4A1-218ENST00000553200 PRM1P04553 51 aa4.3□□□□□ -1.72
NR4A1-218ENST00000553200 A0A0A0MQY5 61 aa4.04□□□□□ -1.76
NR4A1-218ENST00000553200 INE1O15225 51 aa4.04□□□□□ -1.76
NR4A1-218ENST00000553200 MUC19Q7Z5P9 8384 aa3.94□□□□□ -1.78
NR4A1-218ENST00000553200 KRTAP21-1Q3LI58 79 aa3.16□□□□□ -1.9
NR4A1-218ENST00000553200 H3BS24 57 aa2.93□□□□□ -1.94
NR4A1-218ENST00000553200 MUC16Q8WXI7 14507 aa2.83□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 70.6 ms