RNA–Protein interactions for RNA: ENST00000552685.1

LINC00661-207, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-207ENST00000552685 TMEM258P61165 79 aa3.48□□□□□ -1.85
LINC00661-207ENST00000552685 SERP2Q8N6R1 65 aa3.48□□□□□ -1.85
LINC00661-207ENST00000552685 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
LINC00661-207ENST00000552685 LCE3AQ5TA76 89 aa3.45□□□□□ -1.86
LINC00661-207ENST00000552685 C10orf95Q9H7T3 257 aa3.44□□□□□ -1.86
LINC00661-207ENST00000552685 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
LINC00661-207ENST00000552685 A8MU10 97 aa3.41□□□□□ -1.86
LINC00661-207ENST00000552685 KRTAP4-7Q9BYR0 210 aa3.39□□□□□ -1.87
LINC00661-207ENST00000552685 ATP5EP56381 51 aaPredicted RBP3.37□□□□□ -1.87
LINC00661-207ENST00000552685 SMIM26A0A096LP01 95 aa3.36□□□□□ -1.87
LINC00661-207ENST00000552685 TNP1P09430 55 aa3.35□□□□□ -1.87
LINC00661-207ENST00000552685 PRO0628Q9UI54 55 aa3.35□□□□□ -1.87
LINC00661-207ENST00000552685 A0A1B0GU69 56 aa3.33□□□□□ -1.88
LINC00661-207ENST00000552685 H7BZZ5 65 aa3.32□□□□□ -1.88
LINC00661-207ENST00000552685 KRTAP20-2Q3LI61 65 aa3.31□□□□□ -1.88
LINC00661-207ENST00000552685 KRTAP12-3P60328 96 aa3.29□□□□□ -1.88
LINC00661-207ENST00000552685 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
LINC00661-207ENST00000552685 SPRR5A0A1B0GTR4 108 aa3.24□□□□□ -1.89
LINC00661-207ENST00000552685 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
LINC00661-207ENST00000552685 LOC100996750A0A140TA64 210 aa3.21□□□□□ -1.9
LINC00661-207ENST00000552685 V9GYY9 64 aa3.21□□□□□ -1.9
LINC00661-207ENST00000552685 Q1T7F1 81 aa3.2□□□□□ -1.9
LINC00661-207ENST00000552685 KRTAP12-4P60329 112 aa3.19□□□□□ -1.9
LINC00661-207ENST00000552685 AHNAKQ09666 5890 aaKnown RBP3.18□□□□□ -1.9
LINC00661-207ENST00000552685 BRK1Q8WUW1 75 aa3.18□□□□□ -1.9
LINC00661-207ENST00000552685 PRR15LQ9BU68 103 aa3.15□□□□□ -1.91
LINC00661-207ENST00000552685 PMAIP1Q13794 54 aa3.14□□□□□ -1.91
LINC00661-207ENST00000552685 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
LINC00661-207ENST00000552685 LINC01558Q9Y6Z2 57 aa3.11□□□□□ -1.91
LINC00661-207ENST00000552685 MUC5BQ9HC84 5762 aaPredicted RBP3.1□□□□□ -1.91
LINC00661-207ENST00000552685 KRTAP4-11Q9BYQ6 195 aa3.08□□□□□ -1.92
LINC00661-207ENST00000552685 KRTAP25-1Q3LHN0 102 aa3.07□□□□□ -1.92
LINC00661-207ENST00000552685 UQCR11O14957 56 aa3.05□□□□□ -1.92
LINC00661-207ENST00000552685 PSPHP1O15172 72 aa3.05□□□□□ -1.92
LINC00661-207ENST00000552685 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
LINC00661-207ENST00000552685 KTN1-AS1Q86SY8 53 aa3.04□□□□□ -1.92
LINC00661-207ENST00000552685 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
LINC00661-207ENST00000552685 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
LINC00661-207ENST00000552685 CDC42SE1Q9NRR8 79 aa3.01□□□□□ -1.93
LINC00661-207ENST00000552685 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
LINC00661-207ENST00000552685 KRTAP15-1Q3LI76 137 aa3□□□□□ -1.93
LINC00661-207ENST00000552685 MIR22HGQ0VDD5 57 aa2.99□□□□□ -1.93
LINC00661-207ENST00000552685 A6NED7 52 aa2.98□□□□□ -1.93
LINC00661-207ENST00000552685 MT1AP04731 61 aa2.97□□□□□ -1.93
LINC00661-207ENST00000552685 KRTAP19-4Q3LI73 84 aa2.97□□□□□ -1.93
LINC00661-207ENST00000552685 K7ERS5 55 aa2.93□□□□□ -1.94
LINC00661-207ENST00000552685 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
LINC00661-207ENST00000552685 KRTAP23-1A1A580 65 aa2.9□□□□□ -1.95
LINC00661-207ENST00000552685 KRTAP6-2Q3LI66 62 aa2.9□□□□□ -1.95
LINC00661-207ENST00000552685 KRTAP9-6A8MVA2 160 aa2.89□□□□□ -1.95
LINC00661-207ENST00000552685 KRTAP9-4Q9BYQ2 154 aa2.89□□□□□ -1.95
LINC00661-207ENST00000552685 KRTAP9-9Q9BYP9 154 aa2.8□□□□□ -1.96
LINC00661-207ENST00000552685 KRTAP5-1Q6L8H4 278 aa2.79□□□□□ -1.96
LINC00661-207ENST00000552685 A0A0A0MQY5 61 aa2.77□□□□□ -1.97
LINC00661-207ENST00000552685 H3BS24 57 aa2.75□□□□□ -1.97
LINC00661-207ENST00000552685 PRAC1Q96KF2 57 aa2.75□□□□□ -1.97
LINC00661-207ENST00000552685 ROMO1P60602 79 aa2.73□□□□□ -1.97
LINC00661-207ENST00000552685 MT3P25713 68 aa2.71□□□□□ -1.98
LINC00661-207ENST00000552685 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
LINC00661-207ENST00000552685 KRTAP4-2Q9BYR5 136 aa2.46□□□□□ -2.02
LINC00661-207ENST00000552685 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
LINC00661-207ENST00000552685 NDUFAF8A1L188 74 aa2.4□□□□□ -2.03
LINC00661-207ENST00000552685 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
LINC00661-207ENST00000552685 KRTAP4-12Q9BQ66 201 aa2.31□□□□□ -2.04
LINC00661-207ENST00000552685 LUZP6Q538Z0 58 aa2.28□□□□□ -2.04
LINC00661-207ENST00000552685 KRTAP5-11Q6L8G4 156 aa2.21□□□□□ -2.06
LINC00661-207ENST00000552685 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
LINC00661-207ENST00000552685 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
LINC00661-207ENST00000552685 INE1O15225 51 aa2.08□□□□□ -2.08
LINC00661-207ENST00000552685 LCE1FQ5T754 118 aa2.08□□□□□ -2.08
LINC00661-207ENST00000552685 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
LINC00661-207ENST00000552685 LCE3EQ5T5B0 92 aa1.97□□□□□ -2.09
LINC00661-207ENST00000552685 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
LINC00661-207ENST00000552685 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
LINC00661-207ENST00000552685 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
LINC00661-207ENST00000552685 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
LINC00661-207ENST00000552685 PRM1P04553 51 aa1.41□□□□□ -2.18
LINC00661-207ENST00000552685 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 69.3 ms