RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 LCE1DQ5T752 114 aa5.54□□□□□ -1.52
SMARCC2-212ENST00000552566 TNP1P09430 55 aa5.53□□□□□ -1.52
SMARCC2-212ENST00000552566 C10orf95Q9H7T3 257 aa5.53□□□□□ -1.52
SMARCC2-212ENST00000552566 KRTAP4-7Q9BYR0 210 aa5.5□□□□□ -1.53
SMARCC2-212ENST00000552566 ROMO1P60602 79 aa5.49□□□□□ -1.53
SMARCC2-212ENST00000552566 KRTAP10-12P60413 245 aa5.47□□□□□ -1.53
SMARCC2-212ENST00000552566 KRTAP25-1Q3LHN0 102 aa5.44□□□□□ -1.54
SMARCC2-212ENST00000552566 PRO0628Q9UI54 55 aa5.44□□□□□ -1.54
SMARCC2-212ENST00000552566 PMAIP1Q13794 54 aa5.43□□□□□ -1.54
SMARCC2-212ENST00000552566 LCE4AQ5TA78 99 aa5.43□□□□□ -1.54
SMARCC2-212ENST00000552566 KRTAP4-9Q9BYQ8 210 aa5.39□□□□□ -1.55
SMARCC2-212ENST00000552566 KRTAP19-4Q3LI73 84 aa5.35□□□□□ -1.55
SMARCC2-212ENST00000552566 H3BS24 57 aa5.33□□□□□ -1.56
SMARCC2-212ENST00000552566 KRTAP4-2Q9BYR5 136 aa5.27□□□□□ -1.57
SMARCC2-212ENST00000552566 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
SMARCC2-212ENST00000552566 LCE3AQ5TA76 89 aa5.24□□□□□ -1.57
SMARCC2-212ENST00000552566 PP632Q6XCG6 107 aa5.22□□□□□ -1.57
SMARCC2-212ENST00000552566 KRTAP4-11Q9BYQ6 195 aa5.2□□□□□ -1.58
SMARCC2-212ENST00000552566 KRTAP19-7Q3SYF9 63 aa5.15□□□□□ -1.59
SMARCC2-212ENST00000552566 LCE5AQ5TCM9 118 aa5.15□□□□□ -1.59
SMARCC2-212ENST00000552566 MT1EP04732 61 aa5.13□□□□□ -1.59
SMARCC2-212ENST00000552566 KRTAP19-3Q7Z4W3 81 aa5.13□□□□□ -1.59
SMARCC2-212ENST00000552566 KRTAP19-5Q3LI72 72 aa5.12□□□□□ -1.59
SMARCC2-212ENST00000552566 GPR98Q8WXG9 6306 aa5.11□□□□□ -1.59
SMARCC2-212ENST00000552566 DSTQ03001 7570 aaKnown RBP5.09□□□□□ -1.59
SMARCC2-212ENST00000552566 KRTAP12-3P60328 96 aa5.08□□□□□ -1.6
SMARCC2-212ENST00000552566 KTN1-AS1Q86SY8 53 aa5.07□□□□□ -1.6
SMARCC2-212ENST00000552566 PRAC1Q96KF2 57 aa5.02□□□□□ -1.61
SMARCC2-212ENST00000552566 MT1GP13640 62 aa4.98□□□□□ -1.61
SMARCC2-212ENST00000552566 KRTAP15-1Q3LI76 137 aa4.92□□□□□ -1.62
SMARCC2-212ENST00000552566 MT4P47944 62 aa4.91□□□□□ -1.62
SMARCC2-212ENST00000552566 MT1MQ8N339 61 aa4.9□□□□□ -1.63
SMARCC2-212ENST00000552566 MT1LQ93083 61 aa4.88□□□□□ -1.63
SMARCC2-212ENST00000552566 SVIPQ8NHG7 77 aa4.87□□□□□ -1.63
SMARCC2-212ENST00000552566 HMCN1Q96RW7 5635 aa4.86□□□□□ -1.63
SMARCC2-212ENST00000552566 KRTAP4-3Q9BYR4 195 aa4.83□□□□□ -1.64
SMARCC2-212ENST00000552566 KRTAP5-4Q6L8H1 288 aa4.73□□□□□ -1.65
SMARCC2-212ENST00000552566 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
SMARCC2-212ENST00000552566 AHNAK2Q8IVF2 5795 aa4.7□□□□□ -1.66
SMARCC2-212ENST00000552566 KRTAP5-10Q6L8G5 202 aa4.65□□□□□ -1.67
SMARCC2-212ENST00000552566 KRTAP5-3Q6L8H2 238 aa4.63□□□□□ -1.67
SMARCC2-212ENST00000552566 KRTAP20-2Q3LI61 65 aa4.51□□□□□ -1.69
SMARCC2-212ENST00000552566 KRTAP5-7Q6L8G8 165 aa4.49□□□□□ -1.69
SMARCC2-212ENST00000552566 KRTAP5-5Q701N2 237 aaPredicted RBP4.48□□□□□ -1.69
SMARCC2-212ENST00000552566 SPRR5A0A1B0GTR4 108 aa4.45□□□□□ -1.7
SMARCC2-212ENST00000552566 KRTAP12-4P60329 112 aa4.45□□□□□ -1.7
SMARCC2-212ENST00000552566 KRTAP9-6A8MVA2 160 aa4.35□□□□□ -1.71
SMARCC2-212ENST00000552566 LUZP6Q538Z0 58 aa4.3□□□□□ -1.72
SMARCC2-212ENST00000552566 SYNE1Q8NF91 8797 aaKnown RBP4.28□□□□□ -1.72
SMARCC2-212ENST00000552566 MT1AP04731 61 aa4.18□□□□□ -1.74
SMARCC2-212ENST00000552566 KRTAP6-1Q3LI64 71 aa4.14□□□□□ -1.75
SMARCC2-212ENST00000552566 KRTAP5-2Q701N4 177 aa4.11□□□□□ -1.75
SMARCC2-212ENST00000552566 KRTAP5-8O75690 187 aa4.01□□□□□ -1.77
SMARCC2-212ENST00000552566 KRTAP6-2Q3LI66 62 aa4.01□□□□□ -1.77
SMARCC2-212ENST00000552566 AHNAKQ09666 5890 aaKnown RBP3.93□□□□□ -1.78
SMARCC2-212ENST00000552566 MUC5ACP98088 5654 aa3.93□□□□□ -1.78
SMARCC2-212ENST00000552566 NDUFAF8A1L188 74 aa3.9□□□□□ -1.79
SMARCC2-212ENST00000552566 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
SMARCC2-212ENST00000552566 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
SMARCC2-212ENST00000552566 MT3P25713 68 aa3.85□□□□□ -1.79
SMARCC2-212ENST00000552566 KRTAP5-1Q6L8H4 278 aa3.73□□□□□ -1.81
SMARCC2-212ENST00000552566 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
SMARCC2-212ENST00000552566 LCE3DQ9BYE3 92 aa3.53□□□□□ -1.84
SMARCC2-212ENST00000552566 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
SMARCC2-212ENST00000552566 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
SMARCC2-212ENST00000552566 A0A0A0MQY5 61 aa3.45□□□□□ -1.86
SMARCC2-212ENST00000552566 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
SMARCC2-212ENST00000552566 LCE1BQ5T7P3 118 aa3.4□□□□□ -1.87
SMARCC2-212ENST00000552566 INE1O15225 51 aa3.26□□□□□ -1.89
SMARCC2-212ENST00000552566 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
SMARCC2-212ENST00000552566 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
SMARCC2-212ENST00000552566 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
SMARCC2-212ENST00000552566 PRM1P04553 51 aa2.81□□□□□ -1.96
SMARCC2-212ENST00000552566 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
SMARCC2-212ENST00000552566 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
SMARCC2-212ENST00000552566 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
SMARCC2-212ENST00000552566 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
SMARCC2-212ENST00000552566 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms