RNA–Protein interactions for RNA: ENST00000552231.5

CNOT2-236, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 1,545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-236ENST00000552231 SPRR2EP22531 72 aa7.09□□□□□ -1.27
CNOT2-236ENST00000552231 SPRR2BP35325 72 aa7.09□□□□□ -1.27
CNOT2-236ENST00000552231 SPRR2AP35326 72 aa7.09□□□□□ -1.27
CNOT2-236ENST00000552231 PP632Q6XCG6 107 aa7.06□□□□□ -1.28
CNOT2-236ENST00000552231 LCE1AQ5T7P2 110 aa7.01□□□□□ -1.29
CNOT2-236ENST00000552231 KRTAP4-8A0A0G2JLE6 195 aa7□□□□□ -1.29
CNOT2-236ENST00000552231 KRTAP4-8Q9BYQ9 185 aa7□□□□□ -1.29
CNOT2-236ENST00000552231 KRTAP10-7P60409 375 aaPredicted RBP6.95□□□□□ -1.3
CNOT2-236ENST00000552231 KRTAP10-12P60413 245 aa6.94□□□□□ -1.3
CNOT2-236ENST00000552231 KRTAP2-2Q9BYT5 123 aa6.87□□□□□ -1.31
CNOT2-236ENST00000552231 KRTAP2-1Q9BYU5 128 aa6.87□□□□□ -1.31
CNOT2-236ENST00000552231 SPRR2DP22532 72 aa6.86□□□□□ -1.31
CNOT2-236ENST00000552231 LCE3BQ5TA77 95 aa6.69□□□□□ -1.34
CNOT2-236ENST00000552231 LCE3AQ5TA76 89 aa6.68□□□□□ -1.34
CNOT2-236ENST00000552231 LCE5AQ5TCM9 118 aa6.56□□□□□ -1.36
CNOT2-236ENST00000552231 KRTAP9-4Q9BYQ2 154 aa6.56□□□□□ -1.36
CNOT2-236ENST00000552231 KRTAP19-7Q3SYF9 63 aa6.52□□□□□ -1.37
CNOT2-236ENST00000552231 MT1EP04732 61 aa6.47□□□□□ -1.37
CNOT2-236ENST00000552231 DSTQ03001 7570 aaKnown RBP6.46□□□□□ -1.38
CNOT2-236ENST00000552231 KRTAP19-3Q7Z4W3 81 aa6.45□□□□□ -1.38
CNOT2-236ENST00000552231 KRTAP12-3P60328 96 aa6.42□□□□□ -1.38
CNOT2-236ENST00000552231 SPRR5A0A1B0GTR4 108 aa6.32□□□□□ -1.4
CNOT2-236ENST00000552231 KRTAP19-5Q3LI72 72 aa6.32□□□□□ -1.4
CNOT2-236ENST00000552231 MT1GP13640 62 aa6.3□□□□□ -1.4
CNOT2-236ENST00000552231 KRTAP9-9Q9BYP9 154 aa6.29□□□□□ -1.4
CNOT2-236ENST00000552231 KRTAP4-9Q9BYQ8 210 aa6.23□□□□□ -1.41
CNOT2-236ENST00000552231 LCE4AQ5TA78 99 aa6.18□□□□□ -1.42
CNOT2-236ENST00000552231 MT1LQ93083 61 aa6.17□□□□□ -1.42
CNOT2-236ENST00000552231 MT1MQ8N339 61 aa6.16□□□□□ -1.42
CNOT2-236ENST00000552231 GPR98Q8WXG9 6306 aa6.14□□□□□ -1.43
CNOT2-236ENST00000552231 LCE1DQ5T752 114 aa6.09□□□□□ -1.43
CNOT2-236ENST00000552231 HMCN1Q96RW7 5635 aa6.06□□□□□ -1.44
CNOT2-236ENST00000552231 LCE3CQ5T5A8 94 aa6.02□□□□□ -1.45
CNOT2-236ENST00000552231 MT4P47944 62 aa5.99□□□□□ -1.45
CNOT2-236ENST00000552231 KRTAP4-3Q9BYR4 195 aa5.99□□□□□ -1.45
CNOT2-236ENST00000552231 KRTAP5-4Q6L8H1 288 aa5.96□□□□□ -1.46
CNOT2-236ENST00000552231 MT3P25713 68 aa5.94□□□□□ -1.46
CNOT2-236ENST00000552231 AHNAK2Q8IVF2 5795 aa5.86□□□□□ -1.47
CNOT2-236ENST00000552231 KRTAP4-6Q9BYQ5 205 aa5.83□□□□□ -1.48
CNOT2-236ENST00000552231 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
CNOT2-236ENST00000552231 KRTAP5-10Q6L8G5 202 aa5.73□□□□□ -1.49
CNOT2-236ENST00000552231 KRTAP5-5Q701N2 237 aaPredicted RBP5.69□□□□□ -1.5
CNOT2-236ENST00000552231 KRTAP9-6A8MVA2 160 aa5.64□□□□□ -1.51
CNOT2-236ENST00000552231 KRTAP4-12Q9BQ66 201 aa5.64□□□□□ -1.51
CNOT2-236ENST00000552231 KRTAP20-2Q3LI61 65 aa5.62□□□□□ -1.51
CNOT2-236ENST00000552231 LCE1FQ5T754 118 aa5.61□□□□□ -1.51
CNOT2-236ENST00000552231 KRTAP5-3Q6L8H2 238 aa5.57□□□□□ -1.52
CNOT2-236ENST00000552231 KRTAP12-4P60329 112 aa5.56□□□□□ -1.52
CNOT2-236ENST00000552231 LOC100996750A0A140TA64 210 aa5.53□□□□□ -1.52
CNOT2-236ENST00000552231 SYNE1Q8NF91 8797 aaKnown RBP5.52□□□□□ -1.53
CNOT2-236ENST00000552231 KRTAP5-7Q6L8G8 165 aa5.52□□□□□ -1.53
CNOT2-236ENST00000552231 INE1O15225 51 aa5.42□□□□□ -1.54
CNOT2-236ENST00000552231 MT1AP04731 61 aa5.25□□□□□ -1.57
CNOT2-236ENST00000552231 KRTAP6-1Q3LI64 71 aa5.21□□□□□ -1.58
CNOT2-236ENST00000552231 KRTAP5-2Q701N4 177 aa5.21□□□□□ -1.58
CNOT2-236ENST00000552231 KRTAP4-11Q9BYQ6 195 aa5.16□□□□□ -1.58
CNOT2-236ENST00000552231 KRTAP6-2Q3LI66 62 aa5□□□□□ -1.61
CNOT2-236ENST00000552231 KRTAP5-8O75690 187 aa4.98□□□□□ -1.61
CNOT2-236ENST00000552231 OBSCNQ5VST9 7968 aa4.92□□□□□ -1.62
CNOT2-236ENST00000552231 MUC5BQ9HC84 5762 aaPredicted RBP4.86□□□□□ -1.63
CNOT2-236ENST00000552231 AHNAKQ09666 5890 aaKnown RBP4.83□□□□□ -1.64
CNOT2-236ENST00000552231 MUC5ACP98088 5654 aa4.81□□□□□ -1.64
CNOT2-236ENST00000552231 LCE3EQ5T5B0 92 aa4.72□□□□□ -1.65
CNOT2-236ENST00000552231 KRTAP5-1Q6L8H4 278 aa4.68□□□□□ -1.66
CNOT2-236ENST00000552231 LCE1EQ5T753 118 aa4.58□□□□□ -1.68
CNOT2-236ENST00000552231 LCE3DQ9BYE3 92 aa4.57□□□□□ -1.68
CNOT2-236ENST00000552231 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.74
CNOT2-236ENST00000552231 LCE1BQ5T7P3 118 aa4.16□□□□□ -1.74
CNOT2-236ENST00000552231 LCE1CQ5T751 118 aa4.15□□□□□ -1.75
CNOT2-236ENST00000552231 PRM1P04553 51 aa4.03□□□□□ -1.76
CNOT2-236ENST00000552231 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.77□□□□□ -1.81
CNOT2-236ENST00000552231 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
CNOT2-236ENST00000552231 KRTAP21-2Q3LI59 83 aa3.45□□□□□ -1.86
CNOT2-236ENST00000552231 PHGR1C9JFL3 82 aa3.32□□□□□ -1.88
CNOT2-236ENST00000552231 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
CNOT2-236ENST00000552231 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
CNOT2-236ENST00000552231 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
CNOT2-236ENST00000552231 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 92 ms