RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
CHPT1-208ENST00000552215 KRTAP19-6Q3LI70 58 aa3.1□□□□□ -1.91
CHPT1-208ENST00000552215 LOC100996750A0A140TA64 210 aa3.06□□□□□ -1.92
CHPT1-208ENST00000552215 KRTAP4-6Q9BYQ5 205 aa3.06□□□□□ -1.92
CHPT1-208ENST00000552215 SYNE1Q8NF91 8797 aaKnown RBP3.04□□□□□ -1.92
CHPT1-208ENST00000552215 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.02□□□□□ -1.93
CHPT1-208ENST00000552215 KRTAP4-7Q9BYR0 210 aa3.02□□□□□ -1.93
CHPT1-208ENST00000552215 NDUFAF8A1L188 74 aa3□□□□□ -1.93
CHPT1-208ENST00000552215 SPRR2EP22531 72 aa3□□□□□ -1.93
CHPT1-208ENST00000552215 SPRR2BP35325 72 aa3□□□□□ -1.93
CHPT1-208ENST00000552215 SPRR2AP35326 72 aa3□□□□□ -1.93
CHPT1-208ENST00000552215 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
CHPT1-208ENST00000552215 MDN1Q9NU22 5596 aa2.95□□□□□ -1.94
CHPT1-208ENST00000552215 KRTAP4-3Q9BYR4 195 aa2.93□□□□□ -1.94
CHPT1-208ENST00000552215 KRTAP23-1A1A580 65 aa2.91□□□□□ -1.94
CHPT1-208ENST00000552215 KRTAP19-7Q3SYF9 63 aa2.89□□□□□ -1.95
CHPT1-208ENST00000552215 MT1EP04732 61 aa2.88□□□□□ -1.95
CHPT1-208ENST00000552215 LCE5AQ5TCM9 118 aa2.88□□□□□ -1.95
CHPT1-208ENST00000552215 MT1GP13640 62 aa2.87□□□□□ -1.95
CHPT1-208ENST00000552215 SPRR2DP22532 72 aa2.87□□□□□ -1.95
CHPT1-208ENST00000552215 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.96
CHPT1-208ENST00000552215 MT1LQ93083 61 aa2.83□□□□□ -1.96
CHPT1-208ENST00000552215 KRTAP19-3Q7Z4W3 81 aa2.82□□□□□ -1.96
CHPT1-208ENST00000552215 MT1MQ8N339 61 aa2.75□□□□□ -1.97
CHPT1-208ENST00000552215 LCE1AQ5T7P2 110 aa2.74□□□□□ -1.97
CHPT1-208ENST00000552215 KRTAP6-3Q3LI67 103 aa2.74□□□□□ -1.97
CHPT1-208ENST00000552215 LCE3BQ5TA77 95 aa2.69□□□□□ -1.98
CHPT1-208ENST00000552215 MT4P47944 62 aa2.67□□□□□ -1.98
CHPT1-208ENST00000552215 NEBP20929 6669 aa2.65□□□□□ -1.99
CHPT1-208ENST00000552215 KRTAP9-6A8MVA2 160 aa2.63□□□□□ -1.99
CHPT1-208ENST00000552215 KRTAP4-9Q9BYQ8 210 aa2.63□□□□□ -1.99
CHPT1-208ENST00000552215 KRTAP5-9P26371 169 aa2.61□□□□□ -1.99
CHPT1-208ENST00000552215 KRTAP20-1Q3LI63 56 aa2.58□□□□□ -2
CHPT1-208ENST00000552215 LCE1FQ5T754 118 aa2.54□□□□□ -2
CHPT1-208ENST00000552215 KRTAP2-3P0C7H8 128 aa2.51□□□□□ -2.01
CHPT1-208ENST00000552215 KRTAP2-4Q9BYR9 128 aa2.51□□□□□ -2.01
CHPT1-208ENST00000552215 KRTAP12-4P60329 112 aa2.5□□□□□ -2.01
CHPT1-208ENST00000552215 SPRR5A0A1B0GTR4 108 aa2.48□□□□□ -2.01
CHPT1-208ENST00000552215 KRTAP6-1Q3LI64 71 aa2.47□□□□□ -2.01
CHPT1-208ENST00000552215 KRTAP2-2Q9BYT5 123 aa2.46□□□□□ -2.02
CHPT1-208ENST00000552215 KRTAP2-1Q9BYU5 128 aa2.46□□□□□ -2.02
CHPT1-208ENST00000552215 KRTAP4-2Q9BYR5 136 aa2.44□□□□□ -2.02
CHPT1-208ENST00000552215 KRTAP19-4Q3LI73 84 aa2.42□□□□□ -2.02
CHPT1-208ENST00000552215 KRTAP5-3Q6L8H2 238 aa2.41□□□□□ -2.02
CHPT1-208ENST00000552215 KRTAP4-11Q9BYQ6 195 aa2.41□□□□□ -2.02
CHPT1-208ENST00000552215 LCE1DQ5T752 114 aa2.4□□□□□ -2.02
CHPT1-208ENST00000552215 MT1AP04731 61 aa2.37□□□□□ -2.03
CHPT1-208ENST00000552215 KRTAP6-2Q3LI66 62 aa2.36□□□□□ -2.03
CHPT1-208ENST00000552215 HMCN1Q96RW7 5635 aa2.29□□□□□ -2.04
CHPT1-208ENST00000552215 MT3P25713 68 aa2.27□□□□□ -2.05
CHPT1-208ENST00000552215 LCE3DQ9BYE3 92 aa2.26□□□□□ -2.05
CHPT1-208ENST00000552215 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
CHPT1-208ENST00000552215 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
CHPT1-208ENST00000552215 KRTAP20-2Q3LI61 65 aa2.2□□□□□ -2.06
CHPT1-208ENST00000552215 KRTAP5-5Q701N2 237 aaPredicted RBP2.19□□□□□ -2.06
CHPT1-208ENST00000552215 LCE3EQ5T5B0 92 aa2.16□□□□□ -2.06
CHPT1-208ENST00000552215 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.14□□□□□ -2.07
CHPT1-208ENST00000552215 INE1O15225 51 aa2.11□□□□□ -2.07
CHPT1-208ENST00000552215 MUC5ACP98088 5654 aa2.11□□□□□ -2.07
CHPT1-208ENST00000552215 KRTAP5-4Q6L8H1 288 aa2.09□□□□□ -2.07
CHPT1-208ENST00000552215 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
CHPT1-208ENST00000552215 AHNAK2Q8IVF2 5795 aa2.02□□□□□ -2.09
CHPT1-208ENST00000552215 PRM1P04553 51 aa1.97□□□□□ -2.09
CHPT1-208ENST00000552215 LCE1EQ5T753 118 aa1.91□□□□□ -2.1
CHPT1-208ENST00000552215 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
CHPT1-208ENST00000552215 KRTAP5-2Q701N4 177 aa1.85□□□□□ -2.11
CHPT1-208ENST00000552215 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
CHPT1-208ENST00000552215 KRTAP5-11Q6L8G4 156 aa1.85□□□□□ -2.11
CHPT1-208ENST00000552215 KRTAP4-4Q9BYR3 166 aa1.77□□□□□ -2.13
CHPT1-208ENST00000552215 KRTAP5-10Q6L8G5 202 aa1.76□□□□□ -2.13
CHPT1-208ENST00000552215 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
CHPT1-208ENST00000552215 KRTAP5-1Q6L8H4 278 aa1.72□□□□□ -2.13
CHPT1-208ENST00000552215 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
CHPT1-208ENST00000552215 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
CHPT1-208ENST00000552215 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
CHPT1-208ENST00000552215 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
CHPT1-208ENST00000552215 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
CHPT1-208ENST00000552215 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 94.5 ms