RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 LCE3BQ5TA77 95 aa5.88□□□□□ -1.47
GCN1-209ENST00000551920 MT1LQ93083 61 aa5.86□□□□□ -1.47
GCN1-209ENST00000551920 KRTAP2-2Q9BYT5 123 aa5.85□□□□□ -1.47
GCN1-209ENST00000551920 KRTAP2-1Q9BYU5 128 aa5.85□□□□□ -1.47
GCN1-209ENST00000551920 MT1GP13640 62 aa5.82□□□□□ -1.48
GCN1-209ENST00000551920 CDC42SE1Q9NRR8 79 aa5.81□□□□□ -1.48
GCN1-209ENST00000551920 KRTAP12-3P60328 96 aa5.79□□□□□ -1.48
GCN1-209ENST00000551920 MT1MQ8N339 61 aa5.77□□□□□ -1.49
GCN1-209ENST00000551920 DSTQ03001 7570 aaKnown RBP5.75□□□□□ -1.49
GCN1-209ENST00000551920 PP632Q6XCG6 107 aa5.73□□□□□ -1.49
GCN1-209ENST00000551920 ROMO1P60602 79 aa5.68□□□□□ -1.5
GCN1-209ENST00000551920 KRTAP4-3Q9BYR4 195 aa5.66□□□□□ -1.5
GCN1-209ENST00000551920 KRTAP23-1A1A580 65 aa5.65□□□□□ -1.5
GCN1-209ENST00000551920 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
GCN1-209ENST00000551920 KRTAP15-1Q3LI76 137 aa5.49□□□□□ -1.53
GCN1-209ENST00000551920 BRK1Q8WUW1 75 aa5.45□□□□□ -1.54
GCN1-209ENST00000551920 KRTAP4-9Q9BYQ8 210 aa5.43□□□□□ -1.54
GCN1-209ENST00000551920 KRTAP19-4Q3LI73 84 aa5.38□□□□□ -1.55
GCN1-209ENST00000551920 KRTAP5-4Q6L8H1 288 aa5.36□□□□□ -1.55
GCN1-209ENST00000551920 LCE3CQ5T5A8 94 aa5.35□□□□□ -1.55
GCN1-209ENST00000551920 LCE4AQ5TA78 99 aa5.35□□□□□ -1.55
GCN1-209ENST00000551920 LCE1DQ5T752 114 aa5.34□□□□□ -1.55
GCN1-209ENST00000551920 LOC100996750A0A140TA64 210 aa5.31□□□□□ -1.56
GCN1-209ENST00000551920 MT4P47944 62 aa5.3□□□□□ -1.56
GCN1-209ENST00000551920 KRTAP5-5Q701N2 237 aaPredicted RBP5.3□□□□□ -1.56
GCN1-209ENST00000551920 HMCN1Q96RW7 5635 aa5.29□□□□□ -1.56
GCN1-209ENST00000551920 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
GCN1-209ENST00000551920 KRTAP9-6A8MVA2 160 aa5.13□□□□□ -1.59
GCN1-209ENST00000551920 PMAIP1Q13794 54 aa5.11□□□□□ -1.59
GCN1-209ENST00000551920 GPR98Q8WXG9 6306 aa5.1□□□□□ -1.59
GCN1-209ENST00000551920 PRO0628Q9UI54 55 aa5.1□□□□□ -1.59
GCN1-209ENST00000551920 SYNE1Q8NF91 8797 aaKnown RBP5.08□□□□□ -1.6
GCN1-209ENST00000551920 SVIPQ8NHG7 77 aa5.07□□□□□ -1.6
GCN1-209ENST00000551920 KRTAP20-2Q3LI61 65 aa5.04□□□□□ -1.6
GCN1-209ENST00000551920 SPRR5A0A1B0GTR4 108 aa5□□□□□ -1.61
GCN1-209ENST00000551920 KRTAP12-4P60329 112 aa5□□□□□ -1.61
GCN1-209ENST00000551920 AHNAK2Q8IVF2 5795 aa5□□□□□ -1.61
GCN1-209ENST00000551920 MT1AP04731 61 aa4.97□□□□□ -1.61
GCN1-209ENST00000551920 KRTAP6-1Q3LI64 71 aa4.96□□□□□ -1.62
GCN1-209ENST00000551920 PRAC1Q96KF2 57 aa4.96□□□□□ -1.62
GCN1-209ENST00000551920 KRTAP5-3Q6L8H2 238 aa4.89□□□□□ -1.63
GCN1-209ENST00000551920 KRTAP5-10Q6L8G5 202 aa4.84□□□□□ -1.63
GCN1-209ENST00000551920 KRTAP5-2Q701N4 177 aa4.76□□□□□ -1.65
GCN1-209ENST00000551920 KRTAP9-4Q9BYQ2 154 aa4.76□□□□□ -1.65
GCN1-209ENST00000551920 KTN1-AS1Q86SY8 53 aa4.71□□□□□ -1.66
GCN1-209ENST00000551920 KRTAP6-2Q3LI66 62 aa4.67□□□□□ -1.66
GCN1-209ENST00000551920 KRTAP5-7Q6L8G8 165 aa4.59□□□□□ -1.67
GCN1-209ENST00000551920 KRTAP4-11Q9BYQ6 195 aa4.52□□□□□ -1.69
GCN1-209ENST00000551920 MT3P25713 68 aa4.5□□□□□ -1.69
GCN1-209ENST00000551920 OBSCNQ5VST9 7968 aa4.39□□□□□ -1.71
GCN1-209ENST00000551920 KRTAP5-8O75690 187 aa4.39□□□□□ -1.71
GCN1-209ENST00000551920 KRTAP5-1Q6L8H4 278 aa4.22□□□□□ -1.73
GCN1-209ENST00000551920 MUC5ACP98088 5654 aa4.11□□□□□ -1.75
GCN1-209ENST00000551920 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
GCN1-209ENST00000551920 KRTAP9-9Q9BYP9 154 aa4.05□□□□□ -1.76
GCN1-209ENST00000551920 MUC5BQ9HC84 5762 aaPredicted RBP4.05□□□□□ -1.76
GCN1-209ENST00000551920 AHNAKQ09666 5890 aaKnown RBP4.02□□□□□ -1.77
GCN1-209ENST00000551920 LUZP6Q538Z0 58 aa4.02□□□□□ -1.77
GCN1-209ENST00000551920 LCE3DQ9BYE3 92 aa3.89□□□□□ -1.79
GCN1-209ENST00000551920 KRTAP4-2Q9BYR5 136 aa3.89□□□□□ -1.79
GCN1-209ENST00000551920 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
GCN1-209ENST00000551920 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
GCN1-209ENST00000551920 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
GCN1-209ENST00000551920 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
GCN1-209ENST00000551920 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
GCN1-209ENST00000551920 H3BS24 57 aa3.45□□□□□ -1.86
GCN1-209ENST00000551920 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
GCN1-209ENST00000551920 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
GCN1-209ENST00000551920 A0A0A0MQY5 61 aa3.29□□□□□ -1.88
GCN1-209ENST00000551920 KRTAP21-2Q3LI59 83 aa3.27□□□□□ -1.89
GCN1-209ENST00000551920 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
GCN1-209ENST00000551920 INE1O15225 51 aa3.09□□□□□ -1.91
GCN1-209ENST00000551920 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
GCN1-209ENST00000551920 PRM1P04553 51 aa2.95□□□□□ -1.94
GCN1-209ENST00000551920 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
GCN1-209ENST00000551920 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
GCN1-209ENST00000551920 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
GCN1-209ENST00000551920 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms