RNA–Protein interactions for RNA: ENST00000551594.1

CTDSP2-207, Transcript of CTD small phosphatase 2, humanhuman

TSL 3

Gene CTDSP2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-207ENST00000551594 KRTAP2-3P0C7H8 128 aa6.75□□□□□ -1.33
CTDSP2-207ENST00000551594 KRTAP2-4Q9BYR9 128 aa6.75□□□□□ -1.33
CTDSP2-207ENST00000551594 BRK1Q8WUW1 75 aa6.74□□□□□ -1.33
CTDSP2-207ENST00000551594 KRTAP12-3P60328 96 aa6.73□□□□□ -1.33
CTDSP2-207ENST00000551594 MT1LQ93083 61 aa6.72□□□□□ -1.33
CTDSP2-207ENST00000551594 MT1GP13640 62 aa6.67□□□□□ -1.34
CTDSP2-207ENST00000551594 KRTAP23-1A1A580 65 aa6.66□□□□□ -1.34
CTDSP2-207ENST00000551594 LCE3BQ5TA77 95 aa6.63□□□□□ -1.35
CTDSP2-207ENST00000551594 MT1MQ8N339 61 aa6.59□□□□□ -1.35
CTDSP2-207ENST00000551594 PP632Q6XCG6 107 aa6.58□□□□□ -1.36
CTDSP2-207ENST00000551594 KRTAP2-2Q9BYT5 123 aa6.56□□□□□ -1.36
CTDSP2-207ENST00000551594 KRTAP2-1Q9BYU5 128 aa6.56□□□□□ -1.36
CTDSP2-207ENST00000551594 KRTAP4-3Q9BYR4 195 aa6.48□□□□□ -1.37
CTDSP2-207ENST00000551594 KRTAP4-7Q9BYR0 210 aa6.46□□□□□ -1.38
CTDSP2-207ENST00000551594 KRTAP15-1Q3LI76 137 aa6.42□□□□□ -1.38
CTDSP2-207ENST00000551594 DSTQ03001 7570 aaKnown RBP6.41□□□□□ -1.38
CTDSP2-207ENST00000551594 PMAIP1Q13794 54 aa6.34□□□□□ -1.39
CTDSP2-207ENST00000551594 KRTAP19-4Q3LI73 84 aa6.28□□□□□ -1.4
CTDSP2-207ENST00000551594 LCE3CQ5T5A8 94 aa6.24□□□□□ -1.41
CTDSP2-207ENST00000551594 PRO0628Q9UI54 55 aa6.2□□□□□ -1.42
CTDSP2-207ENST00000551594 LOC100996750A0A140TA64 210 aa6.1□□□□□ -1.43
CTDSP2-207ENST00000551594 KRTAP4-9Q9BYQ8 210 aa6.1□□□□□ -1.43
CTDSP2-207ENST00000551594 PRAC1Q96KF2 57 aa6.08□□□□□ -1.44
CTDSP2-207ENST00000551594 LCE4AQ5TA78 99 aa6.04□□□□□ -1.44
CTDSP2-207ENST00000551594 KRTAP5-4Q6L8H1 288 aa6.02□□□□□ -1.45
CTDSP2-207ENST00000551594 KRTAP5-5Q701N2 237 aaPredicted RBP5.99□□□□□ -1.45
CTDSP2-207ENST00000551594 MT4P47944 62 aa5.98□□□□□ -1.45
CTDSP2-207ENST00000551594 LCE1DQ5T752 114 aa5.97□□□□□ -1.45
CTDSP2-207ENST00000551594 KRTAP9-6A8MVA2 160 aa5.92□□□□□ -1.46
CTDSP2-207ENST00000551594 KRTAP4-6Q9BYQ5 205 aa5.87□□□□□ -1.47
CTDSP2-207ENST00000551594 HMCN1Q96RW7 5635 aa5.86□□□□□ -1.47
CTDSP2-207ENST00000551594 KTN1-AS1Q86SY8 53 aa5.84□□□□□ -1.47
CTDSP2-207ENST00000551594 KRTAP12-4P60329 112 aa5.71□□□□□ -1.5
CTDSP2-207ENST00000551594 MT1AP04731 61 aa5.7□□□□□ -1.5
CTDSP2-207ENST00000551594 SYNE1Q8NF91 8797 aaKnown RBP5.69□□□□□ -1.5
CTDSP2-207ENST00000551594 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
CTDSP2-207ENST00000551594 KRTAP20-2Q3LI61 65 aa5.67□□□□□ -1.5
CTDSP2-207ENST00000551594 SPRR5A0A1B0GTR4 108 aa5.65□□□□□ -1.5
CTDSP2-207ENST00000551594 SVIPQ8NHG7 77 aa5.56□□□□□ -1.52
CTDSP2-207ENST00000551594 H3BS24 57 aa5.52□□□□□ -1.53
CTDSP2-207ENST00000551594 AHNAK2Q8IVF2 5795 aa5.52□□□□□ -1.53
CTDSP2-207ENST00000551594 KRTAP5-3Q6L8H2 238 aa5.49□□□□□ -1.53
CTDSP2-207ENST00000551594 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
CTDSP2-207ENST00000551594 GPR98Q8WXG9 6306 aa5.43□□□□□ -1.54
CTDSP2-207ENST00000551594 KRTAP6-2Q3LI66 62 aa5.35□□□□□ -1.55
CTDSP2-207ENST00000551594 KRTAP5-2Q701N4 177 aa5.35□□□□□ -1.55
CTDSP2-207ENST00000551594 KRTAP5-10Q6L8G5 202 aa5.33□□□□□ -1.56
CTDSP2-207ENST00000551594 KRTAP4-12Q9BQ66 201 aa5.28□□□□□ -1.56
CTDSP2-207ENST00000551594 MT3P25713 68 aa5.19□□□□□ -1.58
CTDSP2-207ENST00000551594 KRTAP4-11Q9BYQ6 195 aa5.07□□□□□ -1.6
CTDSP2-207ENST00000551594 KRTAP5-7Q6L8G8 165 aa5.05□□□□□ -1.6
CTDSP2-207ENST00000551594 KRTAP9-9Q9BYP9 154 aa5.04□□□□□ -1.6
CTDSP2-207ENST00000551594 LUZP6Q538Z0 58 aa4.97□□□□□ -1.61
CTDSP2-207ENST00000551594 KRTAP5-8O75690 187 aa4.9□□□□□ -1.63
CTDSP2-207ENST00000551594 OBSCNQ5VST9 7968 aa4.82□□□□□ -1.64
CTDSP2-207ENST00000551594 KRTAP5-1Q6L8H4 278 aa4.73□□□□□ -1.65
CTDSP2-207ENST00000551594 MUC5ACP98088 5654 aa4.64□□□□□ -1.67
CTDSP2-207ENST00000551594 LCE1EQ5T753 118 aa4.64□□□□□ -1.67
CTDSP2-207ENST00000551594 LCE3DQ9BYE3 92 aa4.57□□□□□ -1.68
CTDSP2-207ENST00000551594 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
CTDSP2-207ENST00000551594 MUC5BQ9HC84 5762 aaPredicted RBP4.48□□□□□ -1.69
CTDSP2-207ENST00000551594 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
CTDSP2-207ENST00000551594 LCE1BQ5T7P3 118 aa4.41□□□□□ -1.7
CTDSP2-207ENST00000551594 AHNAKQ09666 5890 aaKnown RBP4.39□□□□□ -1.71
CTDSP2-207ENST00000551594 LCE3EQ5T5B0 92 aa4.37□□□□□ -1.71
CTDSP2-207ENST00000551594 LCE1CQ5T751 118 aa4.32□□□□□ -1.72
CTDSP2-207ENST00000551594 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.97□□□□□ -1.77
CTDSP2-207ENST00000551594 KRTAP5-11Q6L8G4 156 aa3.87□□□□□ -1.79
CTDSP2-207ENST00000551594 KRTAP21-2Q3LI59 83 aa3.73□□□□□ -1.81
CTDSP2-207ENST00000551594 A0A0A0MQY5 61 aa3.64□□□□□ -1.83
CTDSP2-207ENST00000551594 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
CTDSP2-207ENST00000551594 INE1O15225 51 aa3.57□□□□□ -1.84
CTDSP2-207ENST00000551594 PRM1P04553 51 aa3.54□□□□□ -1.84
CTDSP2-207ENST00000551594 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
CTDSP2-207ENST00000551594 PHGR1C9JFL3 82 aa3.34□□□□□ -1.87
CTDSP2-207ENST00000551594 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
CTDSP2-207ENST00000551594 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
CTDSP2-207ENST00000551594 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 99.2 ms