RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 PLNP26678 52 aa-2.1□□□□□ -2.75
SCAF11-215ENST00000551391 SMIM2Q9BVW6 85 aa-2.1□□□□□ -2.75
SCAF11-215ENST00000551391 NRXN3Q9Y4C0 1643 aa-2.1□□□□□ -2.75
SCAF11-215ENST00000551391 TRPM2O94759 1503 aa-2.11□□□□□ -2.75
SCAF11-215ENST00000551391 PDCD5O14737 125 aa-2.12□□□□□ -2.75
SCAF11-215ENST00000551391 SMCO4Q9NRQ5 59 aa-2.12□□□□□ -2.75
SCAF11-215ENST00000551391 DNAH14Q0VDD8 3507 aa-2.13□□□□□ -2.75
SCAF11-215ENST00000551391 CPS1P31327 1500 aa-2.14□□□□□ -2.75
SCAF11-215ENST00000551391 DEFB133Q30KQ1 61 aa-2.15□□□□□ -2.75
SCAF11-215ENST00000551391 KRTAP19-2Q3LHN2 52 aa-2.15□□□□□ -2.75
SCAF11-215ENST00000551391 CFAP47Q6ZTR5 3102 aa-2.15□□□□□ -2.75
SCAF11-215ENST00000551391 ABCA5Q8WWZ7 1642 aa-2.16□□□□□ -2.75
SCAF11-215ENST00000551391 RHPN1-AS1Q9BWJ2 59 aa-2.16□□□□□ -2.76
SCAF11-215ENST00000551391 EFCAB5A4FU69 1503 aa-2.17□□□□□ -2.76
SCAF11-215ENST00000551391 ABCA10Q8WWZ4 1543 aa-2.17□□□□□ -2.76
SCAF11-215ENST00000551391 UNC80Q8N2C7 3258 aa-2.18□□□□□ -2.76
SCAF11-215ENST00000551391 PRXQ9BXM0 1461 aa-2.18□□□□□ -2.76
SCAF11-215ENST00000551391 DNAH12Q6ZR08 3092 aa-2.18□□□□□ -2.76
SCAF11-215ENST00000551391 CEP250Q9BV73 2442 aa-2.19□□□□□ -2.76
SCAF11-215ENST00000551391 LINC01590Q5TEZ4 76 aa-2.19□□□□□ -2.76
SCAF11-215ENST00000551391 LOC400499M0QZD8 3231 aa-2.19□□□□□ -2.76
SCAF11-215ENST00000551391 A0A087WWC5 75 aa-2.21□□□□□ -2.76
SCAF11-215ENST00000551391 XIRP2A4UGR9 3374 aa-2.21□□□□□ -2.76
SCAF11-215ENST00000551391 CD52P31358 61 aa-2.22□□□□□ -2.76
SCAF11-215ENST00000551391 CLTCL1P53675 1640 aa-2.23□□□□□ -2.77
SCAF11-215ENST00000551391 NDUFA1O15239 70 aa-2.23□□□□□ -2.77
SCAF11-215ENST00000551391 NFAT5O94916 1531 aa-2.23□□□□□ -2.77
SCAF11-215ENST00000551391 USP34Q70CQ2 3546 aa-2.24□□□□□ -2.77
SCAF11-215ENST00000551391 TOMM7Q9P0U1 55 aa-2.24□□□□□ -2.77
SCAF11-215ENST00000551391 HTN1P15515 57 aa-2.26□□□□□ -2.77
SCAF11-215ENST00000551391 BRCA2P51587 3418 aa-2.28□□□□□ -2.77
SCAF11-215ENST00000551391 ASPMQ8IZT6 3477 aa-2.28□□□□□ -2.77
SCAF11-215ENST00000551391 A0A096LNI7 61 aa-2.29□□□□□ -2.78
SCAF11-215ENST00000551391 SMIM5Q71RC9 77 aa-2.29□□□□□ -2.78
SCAF11-215ENST00000551391 CMC2Q9NRP2 79 aa-2.29□□□□□ -2.78
SCAF11-215ENST00000551391 FANCD2Q9BXW9 1451 aa-2.29□□□□□ -2.78
SCAF11-215ENST00000551391 DDX60Q8IY21 1712 aaKnown RBP-2.3□□□□□ -2.78
SCAF11-215ENST00000551391 IQGAP1P46940 1657 aa-2.3□□□□□ -2.78
SCAF11-215ENST00000551391 ADCY10Q96PN6 1610 aa-2.3□□□□□ -2.78
SCAF11-215ENST00000551391 DEFB124Q8NES8 71 aa-2.31□□□□□ -2.78
SCAF11-215ENST00000551391 ABCC8Q09428 1581 aa-2.32□□□□□ -2.78
SCAF11-215ENST00000551391 CENPFP49454 3210 aa-2.36□□□□□ -2.79
SCAF11-215ENST00000551391 CDH23Q9H251 3354 aa-2.37□□□□□ -2.79
SCAF11-215ENST00000551391 DUOX1Q9NRD9 1551 aa-2.4□□□□□ -2.79
SCAF11-215ENST00000551391 VCANP13611 3396 aa-2.4□□□□□ -2.79
SCAF11-215ENST00000551391 SAMD9LQ8IVG5 1584 aa-2.41□□□□□ -2.8
SCAF11-215ENST00000551391 VPS13AQ96RL7 3174 aa-2.43□□□□□ -2.8
SCAF11-215ENST00000551391 ERICH3Q5RHP9 1530 aa-2.44□□□□□ -2.8
SCAF11-215ENST00000551391 TOP2AP11388 1531 aaKnown RBP-2.46□□□□□ -2.8
SCAF11-215ENST00000551391 RPL39P62891 51 aaKnown RBP-2.47□□□□□ -2.8
SCAF11-215ENST00000551391 LINC01556Q5JQF7 62 aa-2.52□□□□□ -2.81
SCAF11-215ENST00000551391 RPL39LQ96EH5 51 aaKnown RBP-2.55□□□□□ -2.82
SCAF11-215ENST00000551391 ATP7AQ04656 1500 aa-2.56□□□□□ -2.82
SCAF11-215ENST00000551391 H3BUX3 64 aa-2.56□□□□□ -2.82
SCAF11-215ENST00000551391 MROH2BQ7Z745 1585 aa-2.61□□□□□ -2.83
SCAF11-215ENST00000551391 DEFB104AQ8WTQ1 72 aa-2.62□□□□□ -2.83
SCAF11-215ENST00000551391 SMIM31A0A1B0GVY4 71 aa-2.64□□□□□ -2.83
SCAF11-215ENST00000551391 SNRPGP15A8MWD9 76 aa-2.65□□□□□ -2.83
SCAF11-215ENST00000551391 UTRNP46939 3433 aa-2.68□□□□□ -2.84
SCAF11-215ENST00000551391 K7EIM0 57 aa-2.76□□□□□ -2.85
SCAF11-215ENST00000551391 IQGAP2Q13576 1575 aa-2.77□□□□□ -2.85
SCAF11-215ENST00000551391 APELAP0DMC3 54 aa-2.8□□□□□ -2.86
SCAF11-215ENST00000551391 TOMM5Q8N4H5 51 aa-2.81□□□□□ -2.86
SCAF11-215ENST00000551391 A0A096LPF7 62 aa-2.82□□□□□ -2.86
SCAF11-215ENST00000551391 ARHGAP5-AS1Q96IT6 56 aa-2.86□□□□□ -2.87
SCAF11-215ENST00000551391 PRCDQ00LT1 54 aa-2.87□□□□□ -2.87
SCAF11-215ENST00000551391 TMEM167AQ8TBQ9 72 aa-2.92□□□□□ -2.88
SCAF11-215ENST00000551391 HTN3P15516 51 aa-2.95□□□□□ -2.88
SCAF11-215ENST00000551391 GOLGB1Q14789 3259 aaKnown RBP-2.95□□□□□ -2.88
SCAF11-215ENST00000551391 Q9Y3F1 56 aa-3.03□□□□□ -2.89
SCAF11-215ENST00000551391 SNRPGP62308 76 aaKnown RBP-3.11□□□□□ -2.91
SCAF11-215ENST00000551391 RPL39P5Q59GN2 51 aa-3.15□□□□□ -2.91
SCAF11-215ENST00000551391 H3BSH0 61 aa-3.2□□□□□ -2.92
SCAF11-215ENST00000551391 GCC2Q8IWJ2 1684 aa-3.2□□□□□ -2.92
SCAF11-215ENST00000551391 DEFB108AA8MXU0 73 aa-3.21□□□□□ -2.92
SCAF11-215ENST00000551391 COX14Q96I36 57 aa-3.24□□□□□ -2.93
SCAF11-215ENST00000551391 DEFB108BQ8NET1 73 aa-3.43□□□□□ -2.96
SCAF11-215ENST00000551391 STATHP02808 62 aa-3.74□□□□□ -3.01
Retrieved 78 of 20,778 RNA–protein pairs in 75.7 ms