RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 A0A1B0GU33 70 aa4.35□□□□□ -1.71
GPN3-208ENST00000550974 P0C880 135 aa4.35□□□□□ -1.71
GPN3-208ENST00000550974 MIR22HGQ0VDD5 57 aa4.35□□□□□ -1.71
GPN3-208ENST00000550974 KRTAP13-4Q3LI77 160 aa4.33□□□□□ -1.72
GPN3-208ENST00000550974 KRTAP19-3Q7Z4W3 81 aa4.33□□□□□ -1.72
GPN3-208ENST00000550974 KRTAP5-4Q6L8H1 288 aa4.32□□□□□ -1.72
GPN3-208ENST00000550974 ADM2Q7Z4H4 148 aa4.32□□□□□ -1.72
GPN3-208ENST00000550974 AHNAKQ09666 5890 aaKnown RBP4.26□□□□□ -1.73
GPN3-208ENST00000550974 M0QZ58 72 aa4.2□□□□□ -1.74
GPN3-208ENST00000550974 MT1EP04732 61 aa4.19□□□□□ -1.74
GPN3-208ENST00000550974 KRTAP19-7Q3SYF9 63 aa4.19□□□□□ -1.74
GPN3-208ENST00000550974 PMAIP1Q13794 54 aa4.18□□□□□ -1.74
GPN3-208ENST00000550974 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
GPN3-208ENST00000550974 KRTAP20-2Q3LI61 65 aa4.16□□□□□ -1.74
GPN3-208ENST00000550974 A0A0D9SG42 100 aa4.15□□□□□ -1.75
GPN3-208ENST00000550974 KRTAP12-1P59990 96 aa4.14□□□□□ -1.75
GPN3-208ENST00000550974 MT1GP13640 62 aa4.13□□□□□ -1.75
GPN3-208ENST00000550974 R4GN34 69 aa4.12□□□□□ -1.75
GPN3-208ENST00000550974 PP632Q6XCG6 107 aa4.11□□□□□ -1.75
GPN3-208ENST00000550974 KTN1-AS1Q86SY8 53 aa4.1□□□□□ -1.75
GPN3-208ENST00000550974 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
GPN3-208ENST00000550974 MUC5BQ9HC84 5762 aaPredicted RBP4.06□□□□□ -1.76
GPN3-208ENST00000550974 K7ERS5 55 aa4.06□□□□□ -1.76
GPN3-208ENST00000550974 LINC01554Q52M75 96 aa4.06□□□□□ -1.76
GPN3-208ENST00000550974 MT1MQ8N339 61 aa4.06□□□□□ -1.76
GPN3-208ENST00000550974 KRTAP4-3Q9BYR4 195 aa4.05□□□□□ -1.76
GPN3-208ENST00000550974 SPINT4Q6UDR6 99 aa4.03□□□□□ -1.76
GPN3-208ENST00000550974 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
GPN3-208ENST00000550974 ROMO1P60602 79 aa3.99□□□□□ -1.77
GPN3-208ENST00000550974 PRAC1Q96KF2 57 aa3.99□□□□□ -1.77
GPN3-208ENST00000550974 KRTAP5-8O75690 187 aa3.97□□□□□ -1.77
GPN3-208ENST00000550974 C10orf95Q9H7T3 257 aa3.92□□□□□ -1.78
GPN3-208ENST00000550974 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
GPN3-208ENST00000550974 KRTAP19-5Q3LI72 72 aa3.89□□□□□ -1.79
GPN3-208ENST00000550974 KRTAP25-1Q3LHN0 102 aa3.87□□□□□ -1.79
GPN3-208ENST00000550974 MT1LQ93083 61 aa3.86□□□□□ -1.79
GPN3-208ENST00000550974 CAMK2N1Q7Z7J9 78 aa3.85□□□□□ -1.79
GPN3-208ENST00000550974 KRTAP9-9Q9BYP9 154 aa3.85□□□□□ -1.79
GPN3-208ENST00000550974 SYNE1Q8NF91 8797 aaKnown RBP3.82□□□□□ -1.8
GPN3-208ENST00000550974 KRTAP5-5Q701N2 237 aaPredicted RBP3.77□□□□□ -1.81
GPN3-208ENST00000550974 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
GPN3-208ENST00000550974 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
GPN3-208ENST00000550974 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
GPN3-208ENST00000550974 TNP1P09430 55 aa3.71□□□□□ -1.82
GPN3-208ENST00000550974 KRTAP5-2Q701N4 177 aa3.71□□□□□ -1.82
GPN3-208ENST00000550974 KRTAP23-1A1A580 65 aa3.68□□□□□ -1.82
GPN3-208ENST00000550974 LCE3AQ5TA76 89 aa3.61□□□□□ -1.83
GPN3-208ENST00000550974 KRTAP15-1Q3LI76 137 aa3.47□□□□□ -1.85
GPN3-208ENST00000550974 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
GPN3-208ENST00000550974 KRTAP12-3P60328 96 aa3.43□□□□□ -1.86
GPN3-208ENST00000550974 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
GPN3-208ENST00000550974 H3BS24 57 aa3.38□□□□□ -1.87
GPN3-208ENST00000550974 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
GPN3-208ENST00000550974 KRTAP6-1Q3LI64 71 aa3.32□□□□□ -1.88
GPN3-208ENST00000550974 A0A0A0MQY5 61 aa3.31□□□□□ -1.88
GPN3-208ENST00000550974 MT1AP04731 61 aa3.27□□□□□ -1.89
GPN3-208ENST00000550974 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
GPN3-208ENST00000550974 KRTAP19-4Q3LI73 84 aa3.2□□□□□ -1.9
GPN3-208ENST00000550974 NDUFAF8A1L188 74 aa3.16□□□□□ -1.9
GPN3-208ENST00000550974 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
GPN3-208ENST00000550974 LUZP6Q538Z0 58 aa3.11□□□□□ -1.91
GPN3-208ENST00000550974 MT3P25713 68 aa3.04□□□□□ -1.92
GPN3-208ENST00000550974 LCE1EQ5T753 118 aa2.96□□□□□ -1.94
GPN3-208ENST00000550974 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
GPN3-208ENST00000550974 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
GPN3-208ENST00000550974 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
GPN3-208ENST00000550974 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
GPN3-208ENST00000550974 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
GPN3-208ENST00000550974 INE1O15225 51 aa2.61□□□□□ -1.99
GPN3-208ENST00000550974 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
GPN3-208ENST00000550974 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.37□□□□□ -2.03
GPN3-208ENST00000550974 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
GPN3-208ENST00000550974 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
GPN3-208ENST00000550974 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
GPN3-208ENST00000550974 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
GPN3-208ENST00000550974 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
GPN3-208ENST00000550974 PRM1P04553 51 aa2.1□□□□□ -2.07
GPN3-208ENST00000550974 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 317.9 ms