RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 ROMO1P60602 79 aa5.06□□□□□ -1.6
ERBB3-215ENST00000550828 GPR98Q8WXG9 6306 aa5.05□□□□□ -1.6
ERBB3-215ENST00000550828 KRTAP19-5Q3LI72 72 aa5.03□□□□□ -1.6
ERBB3-215ENST00000550828 MT1EP04732 61 aa5□□□□□ -1.61
ERBB3-215ENST00000550828 LCE3BQ5TA77 95 aa5□□□□□ -1.61
ERBB3-215ENST00000550828 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
ERBB3-215ENST00000550828 KRTAP12-3P60328 96 aa4.87□□□□□ -1.63
ERBB3-215ENST00000550828 KRTAP19-3Q7Z4W3 81 aa4.85□□□□□ -1.63
ERBB3-215ENST00000550828 MT1LQ93083 61 aa4.84□□□□□ -1.63
ERBB3-215ENST00000550828 PMAIP1Q13794 54 aa4.82□□□□□ -1.64
ERBB3-215ENST00000550828 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
ERBB3-215ENST00000550828 PRO0628Q9UI54 55 aa4.82□□□□□ -1.64
ERBB3-215ENST00000550828 PP632Q6XCG6 107 aa4.77□□□□□ -1.65
ERBB3-215ENST00000550828 MT1GP13640 62 aa4.74□□□□□ -1.65
ERBB3-215ENST00000550828 DSTQ03001 7570 aaKnown RBP4.74□□□□□ -1.65
ERBB3-215ENST00000550828 MT1MQ8N339 61 aa4.73□□□□□ -1.65
ERBB3-215ENST00000550828 KRTAP4-9Q9BYQ8 210 aa4.71□□□□□ -1.66
ERBB3-215ENST00000550828 KRTAP15-1Q3LI76 137 aa4.68□□□□□ -1.66
ERBB3-215ENST00000550828 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
ERBB3-215ENST00000550828 KRTAP4-3Q9BYR4 195 aa4.66□□□□□ -1.66
ERBB3-215ENST00000550828 PRAC1Q96KF2 57 aa4.65□□□□□ -1.67
ERBB3-215ENST00000550828 LCE1DQ5T752 114 aa4.59□□□□□ -1.67
ERBB3-215ENST00000550828 LCE3CQ5T5A8 94 aa4.53□□□□□ -1.68
ERBB3-215ENST00000550828 KRTAP19-4Q3LI73 84 aa4.52□□□□□ -1.69
ERBB3-215ENST00000550828 KTN1-AS1Q86SY8 53 aa4.52□□□□□ -1.69
ERBB3-215ENST00000550828 LCE4AQ5TA78 99 aa4.51□□□□□ -1.69
ERBB3-215ENST00000550828 KRTAP5-10Q6L8G5 202 aa4.5□□□□□ -1.69
ERBB3-215ENST00000550828 MT4P47944 62 aa4.47□□□□□ -1.69
ERBB3-215ENST00000550828 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
ERBB3-215ENST00000550828 KRTAP5-7Q6L8G8 165 aa4.42□□□□□ -1.7
ERBB3-215ENST00000550828 AHNAK2Q8IVF2 5795 aa4.41□□□□□ -1.7
ERBB3-215ENST00000550828 LOC100996750A0A140TA64 210 aa4.4□□□□□ -1.71
ERBB3-215ENST00000550828 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
ERBB3-215ENST00000550828 KRTAP5-5Q701N2 237 aaPredicted RBP4.33□□□□□ -1.72
ERBB3-215ENST00000550828 KRTAP5-4Q6L8H1 288 aa4.31□□□□□ -1.72
ERBB3-215ENST00000550828 KRTAP5-3Q6L8H2 238 aa4.29□□□□□ -1.72
ERBB3-215ENST00000550828 KRTAP4-6Q9BYQ5 205 aa4.27□□□□□ -1.73
ERBB3-215ENST00000550828 SVIPQ8NHG7 77 aa4.25□□□□□ -1.73
ERBB3-215ENST00000550828 SPRR5A0A1B0GTR4 108 aa4.23□□□□□ -1.73
ERBB3-215ENST00000550828 MT1AP04731 61 aa4.11□□□□□ -1.75
ERBB3-215ENST00000550828 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
ERBB3-215ENST00000550828 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.75
ERBB3-215ENST00000550828 SYNE1Q8NF91 8797 aaKnown RBP4.07□□□□□ -1.76
ERBB3-215ENST00000550828 KRTAP12-4P60329 112 aa4□□□□□ -1.77
ERBB3-215ENST00000550828 KRTAP9-4Q9BYQ2 154 aa3.92□□□□□ -1.78
ERBB3-215ENST00000550828 AHNAKQ09666 5890 aaKnown RBP3.86□□□□□ -1.79
ERBB3-215ENST00000550828 KRTAP4-11Q9BYQ6 195 aa3.86□□□□□ -1.79
ERBB3-215ENST00000550828 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
ERBB3-215ENST00000550828 KRTAP6-2Q3LI66 62 aa3.82□□□□□ -1.8
ERBB3-215ENST00000550828 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
ERBB3-215ENST00000550828 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
ERBB3-215ENST00000550828 LUZP6Q538Z0 58 aa3.7□□□□□ -1.82
ERBB3-215ENST00000550828 MT3P25713 68 aa3.69□□□□□ -1.82
ERBB3-215ENST00000550828 MUC5BQ9HC84 5762 aaPredicted RBP3.68□□□□□ -1.82
ERBB3-215ENST00000550828 KRTAP9-9Q9BYP9 154 aa3.65□□□□□ -1.83
ERBB3-215ENST00000550828 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
ERBB3-215ENST00000550828 NDUFAF8A1L188 74 aa3.44□□□□□ -1.86
ERBB3-215ENST00000550828 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
ERBB3-215ENST00000550828 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
ERBB3-215ENST00000550828 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
ERBB3-215ENST00000550828 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
ERBB3-215ENST00000550828 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
ERBB3-215ENST00000550828 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
ERBB3-215ENST00000550828 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
ERBB3-215ENST00000550828 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
ERBB3-215ENST00000550828 A0A0A0MQY5 61 aa2.82□□□□□ -1.96
ERBB3-215ENST00000550828 KRTAP4-12Q9BQ66 201 aa2.8□□□□□ -1.96
ERBB3-215ENST00000550828 INE1O15225 51 aa2.77□□□□□ -1.97
ERBB3-215ENST00000550828 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
ERBB3-215ENST00000550828 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
ERBB3-215ENST00000550828 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
ERBB3-215ENST00000550828 H3BS24 57 aa2.68□□□□□ -1.98
ERBB3-215ENST00000550828 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
ERBB3-215ENST00000550828 PRM1P04553 51 aa2.64□□□□□ -1.99
ERBB3-215ENST00000550828 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
ERBB3-215ENST00000550828 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
ERBB3-215ENST00000550828 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
ERBB3-215ENST00000550828 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 66.2 ms