RNA–Protein interactions for RNA: ENST00000550446.5

LETMD1-224, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-224ENST00000550446 KRTAP12-1P59990 96 aa6.83□□□□□ -1.32
LETMD1-224ENST00000550446 UQCR11O14957 56 aa6.82□□□□□ -1.32
LETMD1-224ENST00000550446 PP632Q6XCG6 107 aa6.82□□□□□ -1.32
LETMD1-224ENST00000550446 MT4P47944 62 aa6.8□□□□□ -1.32
LETMD1-224ENST00000550446 LCE4AQ5TA78 99 aa6.77□□□□□ -1.33
LETMD1-224ENST00000550446 MT1MQ8N339 61 aa6.75□□□□□ -1.33
LETMD1-224ENST00000550446 MIR22HGQ0VDD5 57 aa6.73□□□□□ -1.33
LETMD1-224ENST00000550446 AHNAK2Q8IVF2 5795 aa6.7□□□□□ -1.34
LETMD1-224ENST00000550446 MT1LQ93083 61 aa6.7□□□□□ -1.34
LETMD1-224ENST00000550446 A6NED7 52 aa6.66□□□□□ -1.34
LETMD1-224ENST00000550446 KRTAP4-3Q9BYR4 195 aa6.66□□□□□ -1.34
LETMD1-224ENST00000550446 C10orf95Q9H7T3 257 aa6.6□□□□□ -1.35
LETMD1-224ENST00000550446 LCE3AQ5TA76 89 aa6.58□□□□□ -1.36
LETMD1-224ENST00000550446 KRTAP5-4Q6L8H1 288 aa6.58□□□□□ -1.36
LETMD1-224ENST00000550446 KRTAP4-6Q9BYQ5 205 aa6.57□□□□□ -1.36
LETMD1-224ENST00000550446 TNP1P09430 55 aa6.52□□□□□ -1.37
LETMD1-224ENST00000550446 CDC42SE1Q9NRR8 79 aa6.51□□□□□ -1.37
LETMD1-224ENST00000550446 KRTAP5-10Q6L8G5 202 aa6.5□□□□□ -1.37
LETMD1-224ENST00000550446 KRTAP4-7Q9BYR0 210 aa6.42□□□□□ -1.38
LETMD1-224ENST00000550446 K7ERS5 55 aa6.41□□□□□ -1.38
LETMD1-224ENST00000550446 KRTAP12-3P60328 96 aa6.33□□□□□ -1.4
LETMD1-224ENST00000550446 KRTAP5-3Q6L8H2 238 aa6.3□□□□□ -1.4
LETMD1-224ENST00000550446 KRTAP5-7Q6L8G8 165 aa6.29□□□□□ -1.4
LETMD1-224ENST00000550446 BRK1Q8WUW1 75 aa6.29□□□□□ -1.4
LETMD1-224ENST00000550446 KRTAP20-2Q3LI61 65 aa6.25□□□□□ -1.41
LETMD1-224ENST00000550446 KRTAP5-5Q701N2 237 aaPredicted RBP6.19□□□□□ -1.42
LETMD1-224ENST00000550446 SPRR5A0A1B0GTR4 108 aa6.17□□□□□ -1.42
LETMD1-224ENST00000550446 KRTAP25-1Q3LHN0 102 aa6.17□□□□□ -1.42
LETMD1-224ENST00000550446 ROMO1P60602 79 aa6.16□□□□□ -1.42
LETMD1-224ENST00000550446 KRTAP12-4P60329 112 aa6.15□□□□□ -1.42
LETMD1-224ENST00000550446 LOC100996750A0A140TA64 210 aa6.1□□□□□ -1.43
LETMD1-224ENST00000550446 SYNE1Q8NF91 8797 aaKnown RBP6.01□□□□□ -1.45
LETMD1-224ENST00000550446 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
LETMD1-224ENST00000550446 PRO0628Q9UI54 55 aa5.91□□□□□ -1.46
LETMD1-224ENST00000550446 PMAIP1Q13794 54 aa5.9□□□□□ -1.46
LETMD1-224ENST00000550446 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
LETMD1-224ENST00000550446 KRTAP15-1Q3LI76 137 aa5.82□□□□□ -1.48
LETMD1-224ENST00000550446 LCE3CQ5T5A8 94 aa5.8□□□□□ -1.48
LETMD1-224ENST00000550446 KRTAP4-11Q9BYQ6 195 aa5.79□□□□□ -1.48
LETMD1-224ENST00000550446 KRTAP6-1Q3LI64 71 aa5.7□□□□□ -1.5
LETMD1-224ENST00000550446 KRTAP5-2Q701N4 177 aa5.7□□□□□ -1.5
LETMD1-224ENST00000550446 MT1AP04731 61 aa5.69□□□□□ -1.5
LETMD1-224ENST00000550446 PRAC1Q96KF2 57 aa5.67□□□□□ -1.5
LETMD1-224ENST00000550446 SVIPQ8NHG7 77 aa5.64□□□□□ -1.51
LETMD1-224ENST00000550446 AHNAKQ09666 5890 aaKnown RBP5.61□□□□□ -1.51
LETMD1-224ENST00000550446 KRTAP5-8O75690 187 aa5.58□□□□□ -1.52
LETMD1-224ENST00000550446 MUC5BQ9HC84 5762 aaPredicted RBP5.57□□□□□ -1.52
LETMD1-224ENST00000550446 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
LETMD1-224ENST00000550446 KTN1-AS1Q86SY8 53 aa5.55□□□□□ -1.52
LETMD1-224ENST00000550446 MUC5ACP98088 5654 aa5.54□□□□□ -1.52
LETMD1-224ENST00000550446 KRTAP6-2Q3LI66 62 aa5.52□□□□□ -1.53
LETMD1-224ENST00000550446 OBSCNQ5VST9 7968 aa5.52□□□□□ -1.53
LETMD1-224ENST00000550446 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
LETMD1-224ENST00000550446 KRTAP9-9Q9BYP9 154 aa5.37□□□□□ -1.55
LETMD1-224ENST00000550446 MT3P25713 68 aa5.25□□□□□ -1.57
LETMD1-224ENST00000550446 KRTAP5-1Q6L8H4 278 aa5.18□□□□□ -1.58
LETMD1-224ENST00000550446 KRTAP4-12Q9BQ66 201 aa4.87□□□□□ -1.63
LETMD1-224ENST00000550446 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
LETMD1-224ENST00000550446 LCE1BQ5T7P3 118 aa4.67□□□□□ -1.66
LETMD1-224ENST00000550446 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
LETMD1-224ENST00000550446 LUZP6Q538Z0 58 aa4.54□□□□□ -1.68
LETMD1-224ENST00000550446 LCE1CQ5T751 118 aa4.51□□□□□ -1.69
LETMD1-224ENST00000550446 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
LETMD1-224ENST00000550446 LCE3DQ9BYE3 92 aa4.13□□□□□ -1.75
LETMD1-224ENST00000550446 H3BS24 57 aa4.12□□□□□ -1.75
LETMD1-224ENST00000550446 KRTAP5-11Q6L8G4 156 aa4.09□□□□□ -1.75
LETMD1-224ENST00000550446 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
LETMD1-224ENST00000550446 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
LETMD1-224ENST00000550446 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
LETMD1-224ENST00000550446 PHGR1C9JFL3 82 aa3.83□□□□□ -1.8
LETMD1-224ENST00000550446 A0A0A0MQY5 61 aa3.8□□□□□ -1.8
LETMD1-224ENST00000550446 KRTAP21-2Q3LI59 83 aa3.75□□□□□ -1.81
LETMD1-224ENST00000550446 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
LETMD1-224ENST00000550446 INE1O15225 51 aa3.49□□□□□ -1.85
LETMD1-224ENST00000550446 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
LETMD1-224ENST00000550446 PRM1P04553 51 aa3.22□□□□□ -1.89
LETMD1-224ENST00000550446 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
LETMD1-224ENST00000550446 MUC16Q8WXI7 14507 aa2.34□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 10.7 ms