RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 LCE5AQ5TCM9 118 aa6.38□□□□□ -1.39
CDK4-207ENST00000550419 KRTAP19-3Q7Z4W3 81 aa6.38□□□□□ -1.39
CDK4-207ENST00000550419 LCE3BQ5TA77 95 aa6.29□□□□□ -1.4
CDK4-207ENST00000550419 MT1GP13640 62 aa6.28□□□□□ -1.4
CDK4-207ENST00000550419 CDC42SE1Q9NRR8 79 aa6.28□□□□□ -1.4
CDK4-207ENST00000550419 MT1LQ93083 61 aa6.24□□□□□ -1.41
CDK4-207ENST00000550419 PP632Q6XCG6 107 aa6.23□□□□□ -1.41
CDK4-207ENST00000550419 KRTAP12-3P60328 96 aa6.21□□□□□ -1.42
CDK4-207ENST00000550419 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
CDK4-207ENST00000550419 MT1MQ8N339 61 aa6.15□□□□□ -1.42
CDK4-207ENST00000550419 ROMO1P60602 79 aa6.14□□□□□ -1.43
CDK4-207ENST00000550419 DSTQ03001 7570 aaKnown RBP6.06□□□□□ -1.44
CDK4-207ENST00000550419 KRTAP19-4Q3LI73 84 aa5.99□□□□□ -1.45
CDK4-207ENST00000550419 KRTAP4-3Q9BYR4 195 aa5.94□□□□□ -1.46
CDK4-207ENST00000550419 KRTAP15-1Q3LI76 137 aa5.9□□□□□ -1.46
CDK4-207ENST00000550419 KRTAP4-9Q9BYQ8 210 aa5.9□□□□□ -1.46
CDK4-207ENST00000550419 KRTAP4-7Q9BYR0 210 aa5.9□□□□□ -1.46
CDK4-207ENST00000550419 GPR98Q8WXG9 6306 aa5.87□□□□□ -1.47
CDK4-207ENST00000550419 BRK1Q8WUW1 75 aa5.86□□□□□ -1.47
CDK4-207ENST00000550419 LCE4AQ5TA78 99 aa5.79□□□□□ -1.48
CDK4-207ENST00000550419 LCE3CQ5T5A8 94 aa5.76□□□□□ -1.49
CDK4-207ENST00000550419 KRTAP5-4Q6L8H1 288 aa5.74□□□□□ -1.49
CDK4-207ENST00000550419 LCE1DQ5T752 114 aa5.72□□□□□ -1.49
CDK4-207ENST00000550419 MT4P47944 62 aa5.68□□□□□ -1.5
CDK4-207ENST00000550419 KRTAP5-5Q701N2 237 aaPredicted RBP5.64□□□□□ -1.51
CDK4-207ENST00000550419 HMCN1Q96RW7 5635 aa5.63□□□□□ -1.51
CDK4-207ENST00000550419 LOC100996750A0A140TA64 210 aa5.57□□□□□ -1.52
CDK4-207ENST00000550419 PMAIP1Q13794 54 aa5.54□□□□□ -1.52
CDK4-207ENST00000550419 KRTAP4-6Q9BYQ5 205 aa5.5□□□□□ -1.53
CDK4-207ENST00000550419 AHNAK2Q8IVF2 5795 aa5.46□□□□□ -1.54
CDK4-207ENST00000550419 SPRR5A0A1B0GTR4 108 aa5.42□□□□□ -1.54
CDK4-207ENST00000550419 KRTAP12-4P60329 112 aa5.42□□□□□ -1.54
CDK4-207ENST00000550419 KRTAP9-6A8MVA2 160 aa5.4□□□□□ -1.54
CDK4-207ENST00000550419 PRO0628Q9UI54 55 aa5.38□□□□□ -1.55
CDK4-207ENST00000550419 KRTAP20-2Q3LI61 65 aa5.37□□□□□ -1.55
CDK4-207ENST00000550419 KRTAP5-10Q6L8G5 202 aa5.35□□□□□ -1.55
CDK4-207ENST00000550419 MT1AP04731 61 aa5.33□□□□□ -1.56
CDK4-207ENST00000550419 SYNE1Q8NF91 8797 aaKnown RBP5.27□□□□□ -1.57
CDK4-207ENST00000550419 KRTAP6-1Q3LI64 71 aa5.24□□□□□ -1.57
CDK4-207ENST00000550419 KRTAP5-3Q6L8H2 238 aa5.22□□□□□ -1.57
CDK4-207ENST00000550419 PRAC1Q96KF2 57 aa5.22□□□□□ -1.57
CDK4-207ENST00000550419 KRTAP5-7Q6L8G8 165 aa5.16□□□□□ -1.58
CDK4-207ENST00000550419 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
CDK4-207ENST00000550419 KRTAP5-2Q701N4 177 aa5.08□□□□□ -1.6
CDK4-207ENST00000550419 KTN1-AS1Q86SY8 53 aa5.08□□□□□ -1.6
CDK4-207ENST00000550419 KRTAP6-2Q3LI66 62 aa4.96□□□□□ -1.62
CDK4-207ENST00000550419 MT3P25713 68 aa4.87□□□□□ -1.63
CDK4-207ENST00000550419 KRTAP4-11Q9BYQ6 195 aa4.83□□□□□ -1.64
CDK4-207ENST00000550419 SVIPQ8NHG7 77 aa4.77□□□□□ -1.65
CDK4-207ENST00000550419 KRTAP5-8O75690 187 aa4.67□□□□□ -1.66
CDK4-207ENST00000550419 OBSCNQ5VST9 7968 aa4.62□□□□□ -1.67
CDK4-207ENST00000550419 AHNAKQ09666 5890 aaKnown RBP4.53□□□□□ -1.68
CDK4-207ENST00000550419 MUC5BQ9HC84 5762 aaPredicted RBP4.51□□□□□ -1.69
CDK4-207ENST00000550419 MUC5ACP98088 5654 aa4.5□□□□□ -1.69
CDK4-207ENST00000550419 KRTAP5-1Q6L8H4 278 aa4.49□□□□□ -1.69
CDK4-207ENST00000550419 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
CDK4-207ENST00000550419 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
CDK4-207ENST00000550419 LUZP6Q538Z0 58 aa4.43□□□□□ -1.7
CDK4-207ENST00000550419 LCE3DQ9BYE3 92 aa4.2□□□□□ -1.74
CDK4-207ENST00000550419 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
CDK4-207ENST00000550419 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
CDK4-207ENST00000550419 LCE1BQ5T7P3 118 aa4.12□□□□□ -1.75
CDK4-207ENST00000550419 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
CDK4-207ENST00000550419 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
CDK4-207ENST00000550419 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
CDK4-207ENST00000550419 KRTAP5-11Q6L8G4 156 aa3.7□□□□□ -1.82
CDK4-207ENST00000550419 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
CDK4-207ENST00000550419 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
CDK4-207ENST00000550419 KRTAP21-2Q3LI59 83 aa3.48□□□□□ -1.85
CDK4-207ENST00000550419 PHGR1C9JFL3 82 aa3.18□□□□□ -1.9
CDK4-207ENST00000550419 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
CDK4-207ENST00000550419 INE1O15225 51 aa3.12□□□□□ -1.91
CDK4-207ENST00000550419 PRM1P04553 51 aa3.12□□□□□ -1.91
CDK4-207ENST00000550419 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
CDK4-207ENST00000550419 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
CDK4-207ENST00000550419 H3BS24 57 aa2.46□□□□□ -2.02
CDK4-207ENST00000550419 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
CDK4-207ENST00000550419 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 92.9 ms