RNA–Protein interactions for RNA: ENST00000550380.5

LINC02407-201, Transcript of long intergenic non-protein coding RNA 2407, humanhuman

TSL 4

Gene LINC02407, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02407-201ENST00000550380 KRTAP8-1Q8IUC2 63 aa4.81□□□□□ -1.64
LINC02407-201ENST00000550380 LCE3AQ5TA76 89 aa4.78□□□□□ -1.64
LINC02407-201ENST00000550380 PRAC1Q96KF2 57 aa4.78□□□□□ -1.64
LINC02407-201ENST00000550380 MACF1Q9UPN3 7388 aaKnown RBP4.74□□□□□ -1.65
LINC02407-201ENST00000550380 SVIPQ8NHG7 77 aa4.71□□□□□ -1.66
LINC02407-201ENST00000550380 KMT2DO14686 5537 aa4.69□□□□□ -1.66
LINC02407-201ENST00000550380 KRTAP12-3P60328 96 aa4.68□□□□□ -1.66
LINC02407-201ENST00000550380 KRTAP15-1Q3LI76 137 aa4.68□□□□□ -1.66
LINC02407-201ENST00000550380 KRTAP5-9P26371 169 aa4.62□□□□□ -1.67
LINC02407-201ENST00000550380 KRTAP19-7Q3SYF9 63 aa4.62□□□□□ -1.67
LINC02407-201ENST00000550380 SYNE2Q8WXH0 6885 aaKnown RBP4.61□□□□□ -1.67
LINC02407-201ENST00000550380 KRTAP19-5Q3LI72 72 aa4.61□□□□□ -1.67
LINC02407-201ENST00000550380 KRTAP6-3Q3LI67 103 aa4.57□□□□□ -1.68
LINC02407-201ENST00000550380 MT1EP04732 61 aa4.56□□□□□ -1.68
LINC02407-201ENST00000550380 SPRR2FQ96RM1 72 aa4.52□□□□□ -1.69
LINC02407-201ENST00000550380 MT1GP13640 62 aa4.44□□□□□ -1.7
LINC02407-201ENST00000550380 KRTAP19-3Q7Z4W3 81 aa4.44□□□□□ -1.7
LINC02407-201ENST00000550380 MT1LQ93083 61 aa4.44□□□□□ -1.7
LINC02407-201ENST00000550380 MUC12Q9UKN1 5478 aa4.42□□□□□ -1.7
LINC02407-201ENST00000550380 LCE1AQ5T7P2 110 aa4.4□□□□□ -1.71
LINC02407-201ENST00000550380 MDN1Q9NU22 5596 aa4.38□□□□□ -1.71
LINC02407-201ENST00000550380 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
LINC02407-201ENST00000550380 SPRR2EP22531 72 aa4.32□□□□□ -1.72
LINC02407-201ENST00000550380 SPRR2BP35325 72 aa4.32□□□□□ -1.72
LINC02407-201ENST00000550380 SPRR2AP35326 72 aa4.32□□□□□ -1.72
LINC02407-201ENST00000550380 SPRR5A0A1B0GTR4 108 aa4.3□□□□□ -1.72
LINC02407-201ENST00000550380 MT1MQ8N339 61 aa4.29□□□□□ -1.72
LINC02407-201ENST00000550380 NEBP20929 6669 aa4.27□□□□□ -1.73
LINC02407-201ENST00000550380 SPRR2DP22532 72 aa4.18□□□□□ -1.74
LINC02407-201ENST00000550380 LUZP6Q538Z0 58 aa4.15□□□□□ -1.75
LINC02407-201ENST00000550380 DSTQ03001 7570 aaKnown RBP4.06□□□□□ -1.76
LINC02407-201ENST00000550380 KRTAP2-3P0C7H8 128 aa4.02□□□□□ -1.77
LINC02407-201ENST00000550380 KRTAP4-3Q9BYR4 195 aa4.02□□□□□ -1.77
LINC02407-201ENST00000550380 KRTAP2-4Q9BYR9 128 aa4.02□□□□□ -1.77
LINC02407-201ENST00000550380 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
LINC02407-201ENST00000550380 KRTAP20-1Q3LI63 56 aa3.93□□□□□ -1.78
LINC02407-201ENST00000550380 KRTAP5-5Q701N2 237 aaPredicted RBP3.93□□□□□ -1.78
LINC02407-201ENST00000550380 KRTAP2-2Q9BYT5 123 aa3.93□□□□□ -1.78
LINC02407-201ENST00000550380 KRTAP2-1Q9BYU5 128 aa3.93□□□□□ -1.78
LINC02407-201ENST00000550380 KRTAP5-4Q6L8H1 288 aa3.83□□□□□ -1.8
LINC02407-201ENST00000550380 MT1AP04731 61 aa3.82□□□□□ -1.8
LINC02407-201ENST00000550380 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
LINC02407-201ENST00000550380 KRTAP12-4P60329 112 aa3.73□□□□□ -1.81
LINC02407-201ENST00000550380 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
LINC02407-201ENST00000550380 KRTAP6-1Q3LI64 71 aa3.69□□□□□ -1.82
LINC02407-201ENST00000550380 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.83
LINC02407-201ENST00000550380 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.83
LINC02407-201ENST00000550380 MT3P25713 68 aa3.64□□□□□ -1.83
LINC02407-201ENST00000550380 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
LINC02407-201ENST00000550380 HMCN1Q96RW7 5635 aa3.6□□□□□ -1.83
LINC02407-201ENST00000550380 MT4P47944 62 aa3.54□□□□□ -1.84
LINC02407-201ENST00000550380 KRTAP20-2Q3LI61 65 aa3.53□□□□□ -1.84
LINC02407-201ENST00000550380 A0A0A0MQY5 61 aa3.47□□□□□ -1.85
LINC02407-201ENST00000550380 KRTAP5-2Q701N4 177 aa3.46□□□□□ -1.86
LINC02407-201ENST00000550380 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
LINC02407-201ENST00000550380 INE1O15225 51 aa3.33□□□□□ -1.88
LINC02407-201ENST00000550380 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
LINC02407-201ENST00000550380 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
LINC02407-201ENST00000550380 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
LINC02407-201ENST00000550380 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
LINC02407-201ENST00000550380 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
LINC02407-201ENST00000550380 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
LINC02407-201ENST00000550380 OBSCNQ5VST9 7968 aa3.08□□□□□ -1.92
LINC02407-201ENST00000550380 KRTAP5-10Q6L8G5 202 aa3.06□□□□□ -1.92
LINC02407-201ENST00000550380 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
LINC02407-201ENST00000550380 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
LINC02407-201ENST00000550380 KRTAP5-7Q6L8G8 165 aa2.97□□□□□ -1.93
LINC02407-201ENST00000550380 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
LINC02407-201ENST00000550380 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
LINC02407-201ENST00000550380 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
LINC02407-201ENST00000550380 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.98
LINC02407-201ENST00000550380 PRM1P04553 51 aa2.63□□□□□ -1.99
LINC02407-201ENST00000550380 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
LINC02407-201ENST00000550380 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
LINC02407-201ENST00000550380 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
LINC02407-201ENST00000550380 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
LINC02407-201ENST00000550380 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
LINC02407-201ENST00000550380 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 53.4 ms