RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 KRTAP23-1A1A580 65 aa3.04□□□□□ -1.92
GPN3-207ENST00000550228 PP632Q6XCG6 107 aa3.03□□□□□ -1.92
GPN3-207ENST00000550228 KRTAP4-2Q9BYR5 136 aa3.03□□□□□ -1.92
GPN3-207ENST00000550228 KRTAP5-9P26371 169 aa3.02□□□□□ -1.93
GPN3-207ENST00000550228 KRTAP19-7Q3SYF9 63 aa3.02□□□□□ -1.93
GPN3-207ENST00000550228 KTN1-AS1Q86SY8 53 aa3.02□□□□□ -1.93
GPN3-207ENST00000550228 KRTAP12-3P60328 96 aa3□□□□□ -1.93
GPN3-207ENST00000550228 MT1EP04732 61 aa2.99□□□□□ -1.93
GPN3-207ENST00000550228 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
GPN3-207ENST00000550228 SPRR2EP22531 72 aa2.94□□□□□ -1.94
GPN3-207ENST00000550228 SPRR2BP35325 72 aa2.94□□□□□ -1.94
GPN3-207ENST00000550228 SPRR2AP35326 72 aa2.94□□□□□ -1.94
GPN3-207ENST00000550228 MUC12Q9UKN1 5478 aa2.92□□□□□ -1.94
GPN3-207ENST00000550228 LCE1AQ5T7P2 110 aa2.91□□□□□ -1.94
GPN3-207ENST00000550228 MT1LQ93083 61 aa2.91□□□□□ -1.94
GPN3-207ENST00000550228 KRTAP15-1Q3LI76 137 aa2.9□□□□□ -1.95
GPN3-207ENST00000550228 KRTAP19-3Q7Z4W3 81 aa2.9□□□□□ -1.95
GPN3-207ENST00000550228 SVIPQ8NHG7 77 aa2.9□□□□□ -1.95
GPN3-207ENST00000550228 LCE5AQ5TCM9 118 aa2.88□□□□□ -1.95
GPN3-207ENST00000550228 KRTAP19-4Q3LI73 84 aa2.87□□□□□ -1.95
GPN3-207ENST00000550228 NEBP20929 6669 aa2.86□□□□□ -1.95
GPN3-207ENST00000550228 MDN1Q9NU22 5596 aa2.85□□□□□ -1.95
GPN3-207ENST00000550228 MT1GP13640 62 aa2.85□□□□□ -1.95
GPN3-207ENST00000550228 SPRR2DP22532 72 aa2.84□□□□□ -1.95
GPN3-207ENST00000550228 MT1MQ8N339 61 aa2.83□□□□□ -1.96
GPN3-207ENST00000550228 LCE3CQ5T5A8 94 aa2.78□□□□□ -1.96
GPN3-207ENST00000550228 KRTAP4-3Q9BYR4 195 aa2.78□□□□□ -1.96
GPN3-207ENST00000550228 H3BS24 57 aa2.77□□□□□ -1.97
GPN3-207ENST00000550228 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
GPN3-207ENST00000550228 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.98
GPN3-207ENST00000550228 KRTAP2-3P0C7H8 128 aa2.7□□□□□ -1.98
GPN3-207ENST00000550228 KRTAP2-4Q9BYR9 128 aa2.7□□□□□ -1.98
GPN3-207ENST00000550228 KRTAP9-6A8MVA2 160 aa2.63□□□□□ -1.99
GPN3-207ENST00000550228 KRTAP2-2Q9BYT5 123 aa2.63□□□□□ -1.99
GPN3-207ENST00000550228 KRTAP2-1Q9BYU5 128 aa2.63□□□□□ -1.99
GPN3-207ENST00000550228 SPRR5A0A1B0GTR4 108 aa2.61□□□□□ -1.99
GPN3-207ENST00000550228 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
GPN3-207ENST00000550228 DSTQ03001 7570 aaKnown RBP2.53□□□□□ -2
GPN3-207ENST00000550228 LUZP6Q538Z0 58 aa2.49□□□□□ -2.01
GPN3-207ENST00000550228 KRTAP5-4Q6L8H1 288 aa2.49□□□□□ -2.01
GPN3-207ENST00000550228 MT1AP04731 61 aa2.48□□□□□ -2.01
GPN3-207ENST00000550228 MT4P47944 62 aa2.47□□□□□ -2.01
GPN3-207ENST00000550228 KRTAP6-1Q3LI64 71 aa2.46□□□□□ -2.02
GPN3-207ENST00000550228 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
GPN3-207ENST00000550228 KRTAP12-4P60329 112 aa2.41□□□□□ -2.02
GPN3-207ENST00000550228 SYNE1Q8NF91 8797 aaKnown RBP2.36□□□□□ -2.03
GPN3-207ENST00000550228 KRTAP20-2Q3LI61 65 aa2.35□□□□□ -2.03
GPN3-207ENST00000550228 NDUFAF8A1L188 74 aa2.34□□□□□ -2.03
GPN3-207ENST00000550228 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
GPN3-207ENST00000550228 KRTAP6-2Q3LI66 62 aa2.29□□□□□ -2.04
GPN3-207ENST00000550228 MT3P25713 68 aa2.25□□□□□ -2.05
GPN3-207ENST00000550228 AHNAK2Q8IVF2 5795 aa2.25□□□□□ -2.05
GPN3-207ENST00000550228 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
GPN3-207ENST00000550228 KRTAP5-10Q6L8G5 202 aa2.14□□□□□ -2.07
GPN3-207ENST00000550228 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
GPN3-207ENST00000550228 LCE3DQ9BYE3 92 aa2.07□□□□□ -2.08
GPN3-207ENST00000550228 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
GPN3-207ENST00000550228 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
GPN3-207ENST00000550228 A0A0A0MQY5 61 aa2.01□□□□□ -2.09
GPN3-207ENST00000550228 LCE3EQ5T5B0 92 aa2□□□□□ -2.09
GPN3-207ENST00000550228 KRTAP5-8O75690 187 aa1.99□□□□□ -2.09
GPN3-207ENST00000550228 OBSCNQ5VST9 7968 aa1.97□□□□□ -2.09
GPN3-207ENST00000550228 LCE1EQ5T753 118 aa1.95□□□□□ -2.1
GPN3-207ENST00000550228 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
GPN3-207ENST00000550228 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
GPN3-207ENST00000550228 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.1
GPN3-207ENST00000550228 INE1O15225 51 aa1.89□□□□□ -2.11
GPN3-207ENST00000550228 LCE1BQ5T7P3 118 aa1.89□□□□□ -2.11
GPN3-207ENST00000550228 MUC5ACP98088 5654 aa1.88□□□□□ -2.11
GPN3-207ENST00000550228 LCE1CQ5T751 118 aa1.82□□□□□ -2.12
GPN3-207ENST00000550228 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
GPN3-207ENST00000550228 PRM1P04553 51 aa1.69□□□□□ -2.14
GPN3-207ENST00000550228 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
GPN3-207ENST00000550228 LCE1FQ5T754 118 aa1.57□□□□□ -2.16
GPN3-207ENST00000550228 PHGR1C9JFL3 82 aa1.4□□□□□ -2.19
GPN3-207ENST00000550228 MUC19Q7Z5P9 8384 aa1.17□□□□□ -2.22
GPN3-207ENST00000550228 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
GPN3-207ENST00000550228 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 217 ms