RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-223ENST00000550160 KRTAP10-7P60409 375 aaPredicted RBP4.61□□□□□ -1.67
CNOT2-223ENST00000550160 KRTAP10-12P60413 245 aa4.6□□□□□ -1.67
CNOT2-223ENST00000550160 FCGBPQ9Y6R7 5405 aaPredicted RBP4.57□□□□□ -1.68
CNOT2-223ENST00000550160 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.5□□□□□ -1.69
CNOT2-223ENST00000550160 PP632Q6XCG6 107 aa4.47□□□□□ -1.69
CNOT2-223ENST00000550160 KRTAP8-1Q8IUC2 63 aa4.47□□□□□ -1.69
CNOT2-223ENST00000550160 LCE3AQ5TA76 89 aa4.46□□□□□ -1.7
CNOT2-223ENST00000550160 KRTAP2-2Q9BYT5 123 aa4.45□□□□□ -1.7
CNOT2-223ENST00000550160 KTN1-AS1Q86SY8 53 aa4.43□□□□□ -1.7
CNOT2-223ENST00000550160 MACF1Q9UPN3 7388 aaKnown RBP4.38□□□□□ -1.71
CNOT2-223ENST00000550160 MT3P25713 68 aa4.37□□□□□ -1.71
CNOT2-223ENST00000550160 KRTAP6-3Q3LI67 103 aa4.35□□□□□ -1.71
CNOT2-223ENST00000550160 KRTAP19-5Q3LI72 72 aa4.33□□□□□ -1.72
CNOT2-223ENST00000550160 SPRR2FQ96RM1 72 aa4.33□□□□□ -1.72
CNOT2-223ENST00000550160 KRTAP5-9P26371 169 aa4.32□□□□□ -1.72
CNOT2-223ENST00000550160 KRTAP12-3P60328 96 aa4.31□□□□□ -1.72
CNOT2-223ENST00000550160 KRTAP19-7Q3SYF9 63 aa4.3□□□□□ -1.72
CNOT2-223ENST00000550160 NDUFAF8A1L188 74 aa4.29□□□□□ -1.72
CNOT2-223ENST00000550160 KMT2DO14686 5537 aa4.26□□□□□ -1.73
CNOT2-223ENST00000550160 MT1EP04732 61 aa4.26□□□□□ -1.73
CNOT2-223ENST00000550160 KRTAP5-11Q6L8G4 156 aa4.22□□□□□ -1.73
CNOT2-223ENST00000550160 SYNE2Q8WXH0 6885 aaKnown RBP4.19□□□□□ -1.74
CNOT2-223ENST00000550160 SPRR2EP22531 72 aa4.17□□□□□ -1.74
CNOT2-223ENST00000550160 SPRR2BP35325 72 aa4.17□□□□□ -1.74
CNOT2-223ENST00000550160 SPRR2AP35326 72 aa4.17□□□□□ -1.74
CNOT2-223ENST00000550160 LCE1FQ5T754 118 aa4.16□□□□□ -1.74
CNOT2-223ENST00000550160 KRTAP19-3Q7Z4W3 81 aa4.15□□□□□ -1.75
CNOT2-223ENST00000550160 MT1LQ93083 61 aa4.15□□□□□ -1.75
CNOT2-223ENST00000550160 MT1GP13640 62 aa4.11□□□□□ -1.75
CNOT2-223ENST00000550160 MUC12Q9UKN1 5478 aa4.02□□□□□ -1.77
CNOT2-223ENST00000550160 SPRR2DP22532 72 aa4.02□□□□□ -1.77
CNOT2-223ENST00000550160 MT1MQ8N339 61 aa4.02□□□□□ -1.77
CNOT2-223ENST00000550160 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
CNOT2-223ENST00000550160 MDN1Q9NU22 5596 aa3.92□□□□□ -1.78
CNOT2-223ENST00000550160 NEBP20929 6669 aa3.91□□□□□ -1.78
CNOT2-223ENST00000550160 KRTAP4-3Q9BYR4 195 aa3.89□□□□□ -1.79
CNOT2-223ENST00000550160 KRTAP2-3P0C7H8 128 aa3.85□□□□□ -1.79
CNOT2-223ENST00000550160 KRTAP2-4Q9BYR9 128 aa3.85□□□□□ -1.79
CNOT2-223ENST00000550160 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.79
CNOT2-223ENST00000550160 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.79
CNOT2-223ENST00000550160 SPRR5A0A1B0GTR4 108 aa3.81□□□□□ -1.8
CNOT2-223ENST00000550160 KRTAP5-4Q6L8H1 288 aa3.79□□□□□ -1.8
CNOT2-223ENST00000550160 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
CNOT2-223ENST00000550160 KRTAP2-1Q9BYU5 128 aa3.76□□□□□ -1.81
CNOT2-223ENST00000550160 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
CNOT2-223ENST00000550160 DSTQ03001 7570 aaKnown RBP3.73□□□□□ -1.81
CNOT2-223ENST00000550160 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
CNOT2-223ENST00000550160 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
CNOT2-223ENST00000550160 KRTAP5-5Q701N2 237 aaPredicted RBP3.62□□□□□ -1.83
CNOT2-223ENST00000550160 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
CNOT2-223ENST00000550160 MT1AP04731 61 aa3.55□□□□□ -1.84
CNOT2-223ENST00000550160 KRTAP12-4P60329 112 aa3.49□□□□□ -1.85
CNOT2-223ENST00000550160 MT4P47944 62 aa3.47□□□□□ -1.85
CNOT2-223ENST00000550160 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
CNOT2-223ENST00000550160 KRTAP20-2Q3LI61 65 aa3.34□□□□□ -1.87
CNOT2-223ENST00000550160 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
CNOT2-223ENST00000550160 KRTAP6-2Q3LI66 62 aa3.25□□□□□ -1.89
CNOT2-223ENST00000550160 SYNE1Q8NF91 8797 aaKnown RBP3.25□□□□□ -1.89
CNOT2-223ENST00000550160 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
CNOT2-223ENST00000550160 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.89
CNOT2-223ENST00000550160 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
CNOT2-223ENST00000550160 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
CNOT2-223ENST00000550160 AHNAK2Q8IVF2 5795 aa2.92□□□□□ -1.94
CNOT2-223ENST00000550160 INE1O15225 51 aa2.84□□□□□ -1.95
CNOT2-223ENST00000550160 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
CNOT2-223ENST00000550160 GPR98Q8WXG9 6306 aa2.8□□□□□ -1.96
CNOT2-223ENST00000550160 KRTAP5-7Q6L8G8 165 aa2.79□□□□□ -1.96
CNOT2-223ENST00000550160 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
CNOT2-223ENST00000550160 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
CNOT2-223ENST00000550160 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
CNOT2-223ENST00000550160 PRM1P04553 51 aa2.41□□□□□ -2.02
CNOT2-223ENST00000550160 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
CNOT2-223ENST00000550160 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
CNOT2-223ENST00000550160 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
CNOT2-223ENST00000550160 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
CNOT2-223ENST00000550160 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
CNOT2-223ENST00000550160 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
CNOT2-223ENST00000550160 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 66 ms