RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 LCE5AQ5TCM9 118 aa7.03□□□□□ -1.28
DDX54-207ENST00000550016 CDC42SE1Q9NRR8 79 aa6.99□□□□□ -1.29
DDX54-207ENST00000550016 KRTAP2-2Q9BYT5 123 aa6.97□□□□□ -1.29
DDX54-207ENST00000550016 KRTAP2-1Q9BYU5 128 aa6.97□□□□□ -1.29
DDX54-207ENST00000550016 LCE3BQ5TA77 95 aa6.96□□□□□ -1.3
DDX54-207ENST00000550016 MT1GP13640 62 aa6.94□□□□□ -1.3
DDX54-207ENST00000550016 MT1LQ93083 61 aa6.91□□□□□ -1.3
DDX54-207ENST00000550016 KRTAP12-3P60328 96 aa6.89□□□□□ -1.31
DDX54-207ENST00000550016 PP632Q6XCG6 107 aa6.87□□□□□ -1.31
DDX54-207ENST00000550016 ROMO1P60602 79 aa6.83□□□□□ -1.32
DDX54-207ENST00000550016 KRTAP23-1A1A580 65 aa6.82□□□□□ -1.32
DDX54-207ENST00000550016 MT1MQ8N339 61 aa6.81□□□□□ -1.32
DDX54-207ENST00000550016 KRTAP4-3Q9BYR4 195 aa6.63□□□□□ -1.35
DDX54-207ENST00000550016 DSTQ03001 7570 aaKnown RBP6.62□□□□□ -1.35
DDX54-207ENST00000550016 KRTAP4-7Q9BYR0 210 aa6.58□□□□□ -1.36
DDX54-207ENST00000550016 BRK1Q8WUW1 75 aa6.56□□□□□ -1.36
DDX54-207ENST00000550016 KRTAP19-4Q3LI73 84 aa6.55□□□□□ -1.36
DDX54-207ENST00000550016 KRTAP15-1Q3LI76 137 aa6.55□□□□□ -1.36
DDX54-207ENST00000550016 LCE3CQ5T5A8 94 aa6.38□□□□□ -1.39
DDX54-207ENST00000550016 LCE4AQ5TA78 99 aa6.38□□□□□ -1.39
DDX54-207ENST00000550016 KRTAP4-9Q9BYQ8 210 aa6.38□□□□□ -1.39
DDX54-207ENST00000550016 KRTAP5-4Q6L8H1 288 aa6.31□□□□□ -1.4
DDX54-207ENST00000550016 LCE1DQ5T752 114 aa6.27□□□□□ -1.41
DDX54-207ENST00000550016 MT4P47944 62 aa6.24□□□□□ -1.41
DDX54-207ENST00000550016 LOC100996750A0A140TA64 210 aa6.21□□□□□ -1.42
DDX54-207ENST00000550016 PMAIP1Q13794 54 aa6.2□□□□□ -1.42
DDX54-207ENST00000550016 KRTAP5-5Q701N2 237 aaPredicted RBP6.2□□□□□ -1.42
DDX54-207ENST00000550016 GPR98Q8WXG9 6306 aa6.19□□□□□ -1.42
DDX54-207ENST00000550016 PRO0628Q9UI54 55 aa6.13□□□□□ -1.43
DDX54-207ENST00000550016 KRTAP4-6Q9BYQ5 205 aa6.11□□□□□ -1.43
DDX54-207ENST00000550016 HMCN1Q96RW7 5635 aa6.05□□□□□ -1.44
DDX54-207ENST00000550016 KRTAP12-4P60329 112 aa6□□□□□ -1.45
DDX54-207ENST00000550016 KRTAP9-6A8MVA2 160 aa5.99□□□□□ -1.45
DDX54-207ENST00000550016 SPRR5A0A1B0GTR4 108 aa5.96□□□□□ -1.46
DDX54-207ENST00000550016 KRTAP20-2Q3LI61 65 aa5.93□□□□□ -1.46
DDX54-207ENST00000550016 MT1AP04731 61 aa5.89□□□□□ -1.47
DDX54-207ENST00000550016 PRAC1Q96KF2 57 aa5.87□□□□□ -1.47
DDX54-207ENST00000550016 KRTAP6-1Q3LI64 71 aa5.83□□□□□ -1.48
DDX54-207ENST00000550016 KRTAP5-3Q6L8H2 238 aa5.75□□□□□ -1.49
DDX54-207ENST00000550016 SYNE1Q8NF91 8797 aaKnown RBP5.75□□□□□ -1.49
DDX54-207ENST00000550016 KTN1-AS1Q86SY8 53 aa5.74□□□□□ -1.49
DDX54-207ENST00000550016 AHNAK2Q8IVF2 5795 aa5.72□□□□□ -1.49
DDX54-207ENST00000550016 KRTAP9-4Q9BYQ2 154 aa5.67□□□□□ -1.5
DDX54-207ENST00000550016 KRTAP5-10Q6L8G5 202 aa5.66□□□□□ -1.5
DDX54-207ENST00000550016 H3BS24 57 aa5.6□□□□□ -1.51
DDX54-207ENST00000550016 KRTAP5-2Q701N4 177 aa5.58□□□□□ -1.52
DDX54-207ENST00000550016 KRTAP6-2Q3LI66 62 aa5.51□□□□□ -1.53
DDX54-207ENST00000550016 KRTAP5-7Q6L8G8 165 aa5.41□□□□□ -1.54
DDX54-207ENST00000550016 MT3P25713 68 aa5.38□□□□□ -1.55
DDX54-207ENST00000550016 A0A0A0MQY5 61 aa5.35□□□□□ -1.55
DDX54-207ENST00000550016 KRTAP4-11Q9BYQ6 195 aa5.34□□□□□ -1.55
DDX54-207ENST00000550016 KRTAP5-8O75690 187 aa5.15□□□□□ -1.59
DDX54-207ENST00000550016 OBSCNQ5VST9 7968 aa4.99□□□□□ -1.61
DDX54-207ENST00000550016 LUZP6Q538Z0 58 aa4.94□□□□□ -1.62
DDX54-207ENST00000550016 KRTAP5-1Q6L8H4 278 aa4.94□□□□□ -1.62
DDX54-207ENST00000550016 LCE1EQ5T753 118 aa4.87□□□□□ -1.63
DDX54-207ENST00000550016 KRTAP9-9Q9BYP9 154 aa4.84□□□□□ -1.63
DDX54-207ENST00000550016 AHNAKQ09666 5890 aaKnown RBP4.78□□□□□ -1.64
DDX54-207ENST00000550016 MUC5BQ9HC84 5762 aaPredicted RBP4.74□□□□□ -1.65
DDX54-207ENST00000550016 MUC5ACP98088 5654 aa4.73□□□□□ -1.65
DDX54-207ENST00000550016 LCE3DQ9BYE3 92 aa4.66□□□□□ -1.66
DDX54-207ENST00000550016 LCE1BQ5T7P3 118 aa4.55□□□□□ -1.68
DDX54-207ENST00000550016 KRTAP4-2Q9BYR5 136 aa4.55□□□□□ -1.68
DDX54-207ENST00000550016 LCE1CQ5T751 118 aa4.52□□□□□ -1.69
DDX54-207ENST00000550016 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
DDX54-207ENST00000550016 NDUFAF8A1L188 74 aa4.32□□□□□ -1.72
DDX54-207ENST00000550016 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.14□□□□□ -1.75
DDX54-207ENST00000550016 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
DDX54-207ENST00000550016 KRTAP4-12Q9BQ66 201 aa4.01□□□□□ -1.77
DDX54-207ENST00000550016 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
DDX54-207ENST00000550016 KRTAP21-2Q3LI59 83 aa3.84□□□□□ -1.79
DDX54-207ENST00000550016 INE1O15225 51 aa3.76□□□□□ -1.81
DDX54-207ENST00000550016 PRM1P04553 51 aa3.5□□□□□ -1.85
DDX54-207ENST00000550016 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
DDX54-207ENST00000550016 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
DDX54-207ENST00000550016 MUC19Q7Z5P9 8384 aa3.04□□□□□ -1.92
DDX54-207ENST00000550016 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
DDX54-207ENST00000550016 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 138.8 ms