RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 LCE5AQ5TCM9 118 aa5.41□□□□□ -1.54
GPN3-206ENST00000549963 KRTAP2-2Q9BYT5 123 aa5.4□□□□□ -1.54
GPN3-206ENST00000549963 KRTAP2-1Q9BYU5 128 aa5.4□□□□□ -1.54
GPN3-206ENST00000549963 MT1GP13640 62 aa5.39□□□□□ -1.55
GPN3-206ENST00000549963 PP632Q6XCG6 107 aa5.39□□□□□ -1.55
GPN3-206ENST00000549963 LCE3BQ5TA77 95 aa5.38□□□□□ -1.55
GPN3-206ENST00000549963 KRTAP12-3P60328 96 aa5.36□□□□□ -1.55
GPN3-206ENST00000549963 ROMO1P60602 79 aa5.36□□□□□ -1.55
GPN3-206ENST00000549963 KRTAP23-1A1A580 65 aa5.34□□□□□ -1.55
GPN3-206ENST00000549963 MT1LQ93083 61 aa5.32□□□□□ -1.56
GPN3-206ENST00000549963 MT1MQ8N339 61 aa5.24□□□□□ -1.57
GPN3-206ENST00000549963 GPR98Q8WXG9 6306 aa5.19□□□□□ -1.58
GPN3-206ENST00000549963 BRK1Q8WUW1 75 aa5.19□□□□□ -1.58
GPN3-206ENST00000549963 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
GPN3-206ENST00000549963 DSTQ03001 7570 aaKnown RBP5.14□□□□□ -1.59
GPN3-206ENST00000549963 KRTAP15-1Q3LI76 137 aa5.1□□□□□ -1.59
GPN3-206ENST00000549963 KRTAP4-3Q9BYR4 195 aa5.07□□□□□ -1.6
GPN3-206ENST00000549963 KRTAP4-7Q9BYR0 210 aa5.04□□□□□ -1.6
GPN3-206ENST00000549963 LCE3CQ5T5A8 94 aa4.96□□□□□ -1.62
GPN3-206ENST00000549963 LCE4AQ5TA78 99 aa4.95□□□□□ -1.62
GPN3-206ENST00000549963 PMAIP1Q13794 54 aa4.92□□□□□ -1.62
GPN3-206ENST00000549963 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.63
GPN3-206ENST00000549963 MT4P47944 62 aa4.83□□□□□ -1.64
GPN3-206ENST00000549963 KRTAP5-4Q6L8H1 288 aa4.83□□□□□ -1.64
GPN3-206ENST00000549963 LCE1DQ5T752 114 aa4.82□□□□□ -1.64
GPN3-206ENST00000549963 LOC100996750A0A140TA64 210 aa4.77□□□□□ -1.65
GPN3-206ENST00000549963 KRTAP5-5Q701N2 237 aaPredicted RBP4.74□□□□□ -1.65
GPN3-206ENST00000549963 PRO0628Q9UI54 55 aa4.74□□□□□ -1.65
GPN3-206ENST00000549963 KRTAP12-4P60329 112 aa4.68□□□□□ -1.66
GPN3-206ENST00000549963 KRTAP4-6Q9BYQ5 205 aa4.68□□□□□ -1.66
GPN3-206ENST00000549963 HMCN1Q96RW7 5635 aa4.64□□□□□ -1.67
GPN3-206ENST00000549963 SPRR5A0A1B0GTR4 108 aa4.61□□□□□ -1.67
GPN3-206ENST00000549963 PRAC1Q96KF2 57 aa4.58□□□□□ -1.68
GPN3-206ENST00000549963 KRTAP9-6A8MVA2 160 aa4.57□□□□□ -1.68
GPN3-206ENST00000549963 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
GPN3-206ENST00000549963 MT1AP04731 61 aa4.55□□□□□ -1.68
GPN3-206ENST00000549963 KRTAP5-10Q6L8G5 202 aa4.49□□□□□ -1.69
GPN3-206ENST00000549963 KRTAP6-1Q3LI64 71 aa4.48□□□□□ -1.69
GPN3-206ENST00000549963 AHNAK2Q8IVF2 5795 aa4.48□□□□□ -1.69
GPN3-206ENST00000549963 KTN1-AS1Q86SY8 53 aa4.47□□□□□ -1.69
GPN3-206ENST00000549963 KRTAP5-7Q6L8G8 165 aa4.44□□□□□ -1.7
GPN3-206ENST00000549963 SYNE1Q8NF91 8797 aaKnown RBP4.42□□□□□ -1.7
GPN3-206ENST00000549963 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
GPN3-206ENST00000549963 KRTAP9-4Q9BYQ2 154 aa4.39□□□□□ -1.71
GPN3-206ENST00000549963 SVIPQ8NHG7 77 aa4.29□□□□□ -1.72
GPN3-206ENST00000549963 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
GPN3-206ENST00000549963 KRTAP6-2Q3LI66 62 aa4.25□□□□□ -1.73
GPN3-206ENST00000549963 MT3P25713 68 aa4.2□□□□□ -1.74
GPN3-206ENST00000549963 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
GPN3-206ENST00000549963 AHNAKQ09666 5890 aaKnown RBP4.02□□□□□ -1.77
GPN3-206ENST00000549963 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
GPN3-206ENST00000549963 KRTAP5-8O75690 187 aa3.94□□□□□ -1.78
GPN3-206ENST00000549963 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
GPN3-206ENST00000549963 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
GPN3-206ENST00000549963 MUC5BQ9HC84 5762 aaPredicted RBP3.85□□□□□ -1.79
GPN3-206ENST00000549963 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
GPN3-206ENST00000549963 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
GPN3-206ENST00000549963 KRTAP9-9Q9BYP9 154 aa3.77□□□□□ -1.81
GPN3-206ENST00000549963 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
GPN3-206ENST00000549963 LCE1BQ5T7P3 118 aa3.54□□□□□ -1.84
GPN3-206ENST00000549963 LCE1CQ5T751 118 aa3.5□□□□□ -1.85
GPN3-206ENST00000549963 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
GPN3-206ENST00000549963 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
GPN3-206ENST00000549963 NDUFAF8A1L188 74 aa3.35□□□□□ -1.87
GPN3-206ENST00000549963 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
GPN3-206ENST00000549963 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
GPN3-206ENST00000549963 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
GPN3-206ENST00000549963 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
GPN3-206ENST00000549963 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
GPN3-206ENST00000549963 A0A0A0MQY5 61 aa2.86□□□□□ -1.95
GPN3-206ENST00000549963 INE1O15225 51 aa2.79□□□□□ -1.96
GPN3-206ENST00000549963 PRM1P04553 51 aa2.72□□□□□ -1.97
GPN3-206ENST00000549963 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
GPN3-206ENST00000549963 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
GPN3-206ENST00000549963 H3BS24 57 aa2.45□□□□□ -2.02
GPN3-206ENST00000549963 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
GPN3-206ENST00000549963 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
GPN3-206ENST00000549963 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 79.7 ms