RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
DEPDC4-207ENST00000549249 K7ERS5 55 aa3.38□□□□□ -1.87
DEPDC4-207ENST00000549249 MT1XP80297 61 aa3.38□□□□□ -1.87
DEPDC4-207ENST00000549249 PRO0628Q9UI54 55 aa3.38□□□□□ -1.87
DEPDC4-207ENST00000549249 KRTAP10-5P60370 271 aa3.37□□□□□ -1.87
DEPDC4-207ENST00000549249 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
DEPDC4-207ENST00000549249 CAMK2N1Q7Z7J9 78 aa3.37□□□□□ -1.87
DEPDC4-207ENST00000549249 C10orf95Q9H7T3 257 aa3.34□□□□□ -1.87
DEPDC4-207ENST00000549249 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
DEPDC4-207ENST00000549249 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
DEPDC4-207ENST00000549249 KRTAP10-12P60413 245 aa3.29□□□□□ -1.88
DEPDC4-207ENST00000549249 PMAIP1Q13794 54 aa3.29□□□□□ -1.88
DEPDC4-207ENST00000549249 ROMO1P60602 79 aa3.28□□□□□ -1.88
DEPDC4-207ENST00000549249 PRO2289Q9P1D8 64 aa3.28□□□□□ -1.88
DEPDC4-207ENST00000549249 NEBP20929 6669 aa3.28□□□□□ -1.89
DEPDC4-207ENST00000549249 TNP1P09430 55 aa3.2□□□□□ -1.9
DEPDC4-207ENST00000549249 KRTAP25-1Q3LHN0 102 aa3.19□□□□□ -1.9
DEPDC4-207ENST00000549249 KRTAP20-1Q3LI63 56 aa3.19□□□□□ -1.9
DEPDC4-207ENST00000549249 MUC12Q9UKN1 5478 aa3.18□□□□□ -1.9
DEPDC4-207ENST00000549249 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
DEPDC4-207ENST00000549249 LCE3CQ5T5A8 94 aa3.15□□□□□ -1.91
DEPDC4-207ENST00000549249 PRAC1Q96KF2 57 aa3.15□□□□□ -1.91
DEPDC4-207ENST00000549249 KTN1-AS1Q86SY8 53 aa3.14□□□□□ -1.91
DEPDC4-207ENST00000549249 LCE3AQ5TA76 89 aa3.13□□□□□ -1.91
DEPDC4-207ENST00000549249 KMT2DO14686 5537 aa3.12□□□□□ -1.91
DEPDC4-207ENST00000549249 MDN1Q9NU22 5596 aa3.1□□□□□ -1.91
DEPDC4-207ENST00000549249 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.91
DEPDC4-207ENST00000549249 KRTAP2-3P0C7H8 128 aa3.08□□□□□ -1.92
DEPDC4-207ENST00000549249 KRTAP2-4Q9BYR9 128 aa3.08□□□□□ -1.92
DEPDC4-207ENST00000549249 KRTAP8-1Q8IUC2 63 aa3.05□□□□□ -1.92
DEPDC4-207ENST00000549249 PP632Q6XCG6 107 aa3.04□□□□□ -1.92
DEPDC4-207ENST00000549249 SPRR2FQ96RM1 72 aa3.04□□□□□ -1.92
DEPDC4-207ENST00000549249 KRTAP19-5Q3LI72 72 aa3.03□□□□□ -1.92
DEPDC4-207ENST00000549249 SPRR2EP22531 72 aa3.02□□□□□ -1.93
DEPDC4-207ENST00000549249 SPRR2BP35325 72 aa3.02□□□□□ -1.93
DEPDC4-207ENST00000549249 SPRR2AP35326 72 aa3.02□□□□□ -1.93
DEPDC4-207ENST00000549249 KRTAP19-7Q3SYF9 63 aa3.02□□□□□ -1.93
DEPDC4-207ENST00000549249 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
DEPDC4-207ENST00000549249 KRTAP12-3P60328 96 aa2.98□□□□□ -1.93
DEPDC4-207ENST00000549249 KRTAP2-1Q9BYU5 128 aa2.98□□□□□ -1.93
DEPDC4-207ENST00000549249 MT1EP04732 61 aa2.97□□□□□ -1.93
DEPDC4-207ENST00000549249 SPRR2DP22532 72 aa2.93□□□□□ -1.94
DEPDC4-207ENST00000549249 MT1LQ93083 61 aa2.89□□□□□ -1.95
DEPDC4-207ENST00000549249 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
DEPDC4-207ENST00000549249 KRTAP5-2Q701N4 177 aa2.88□□□□□ -1.95
DEPDC4-207ENST00000549249 KRTAP19-3Q7Z4W3 81 aa2.85□□□□□ -1.95
DEPDC4-207ENST00000549249 GPR98Q8WXG9 6306 aa2.82□□□□□ -1.96
DEPDC4-207ENST00000549249 MT1GP13640 62 aa2.8□□□□□ -1.96
DEPDC4-207ENST00000549249 MT1MQ8N339 61 aa2.8□□□□□ -1.96
DEPDC4-207ENST00000549249 SPRR5A0A1B0GTR4 108 aa2.72□□□□□ -1.97
DEPDC4-207ENST00000549249 DSTQ03001 7570 aaKnown RBP2.71□□□□□ -1.97
DEPDC4-207ENST00000549249 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
DEPDC4-207ENST00000549249 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
DEPDC4-207ENST00000549249 MT4P47944 62 aa2.56□□□□□ -2
DEPDC4-207ENST00000549249 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
DEPDC4-207ENST00000549249 AHNAK2Q8IVF2 5795 aa2.53□□□□□ -2
DEPDC4-207ENST00000549249 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
DEPDC4-207ENST00000549249 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
DEPDC4-207ENST00000549249 MT1AP04731 61 aa2.46□□□□□ -2.02
DEPDC4-207ENST00000549249 KRTAP5-10Q6L8G5 202 aa2.46□□□□□ -2.02
DEPDC4-207ENST00000549249 KRTAP6-1Q3LI64 71 aa2.45□□□□□ -2.02
DEPDC4-207ENST00000549249 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
DEPDC4-207ENST00000549249 KRTAP5-7Q6L8G8 165 aa2.4□□□□□ -2.03
DEPDC4-207ENST00000549249 KRTAP12-4P60329 112 aa2.37□□□□□ -2.03
DEPDC4-207ENST00000549249 SYNE1Q8NF91 8797 aaKnown RBP2.36□□□□□ -2.03
DEPDC4-207ENST00000549249 KRTAP20-2Q3LI61 65 aa2.35□□□□□ -2.03
DEPDC4-207ENST00000549249 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
DEPDC4-207ENST00000549249 KRTAP6-2Q3LI66 62 aa2.25□□□□□ -2.05
DEPDC4-207ENST00000549249 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
DEPDC4-207ENST00000549249 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
DEPDC4-207ENST00000549249 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
DEPDC4-207ENST00000549249 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
DEPDC4-207ENST00000549249 INE1O15225 51 aa2.04□□□□□ -2.08
DEPDC4-207ENST00000549249 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
DEPDC4-207ENST00000549249 PRM1P04553 51 aa1.72□□□□□ -2.13
DEPDC4-207ENST00000549249 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
DEPDC4-207ENST00000549249 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
DEPDC4-207ENST00000549249 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 85.6 ms