RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 KRTAP12-1P59990 96 aa1.63□□□□□ -2.15
APAF1-208ENST00000549007 KRTAP6-3Q3LI67 103 aa1.63□□□□□ -2.15
APAF1-208ENST00000549007 SPATA8Q6RVD6 105 aa1.62□□□□□ -2.15
APAF1-208ENST00000549007 UQCR11O14957 56 aa1.6□□□□□ -2.15
APAF1-208ENST00000549007 MIR22HGQ0VDD5 57 aa1.59□□□□□ -2.16
APAF1-208ENST00000549007 CRCT1Q9UGL9 99 aa1.58□□□□□ -2.16
APAF1-208ENST00000549007 H0YAA0 97 aa1.57□□□□□ -2.16
APAF1-208ENST00000549007 M0QZ58 72 aa1.57□□□□□ -2.16
APAF1-208ENST00000549007 FCGBPQ9Y6R7 5405 aaPredicted RBP1.56□□□□□ -2.16
APAF1-208ENST00000549007 A0A0D9SG42 100 aa1.56□□□□□ -2.16
APAF1-208ENST00000549007 KRTAP13-4Q3LI77 160 aa1.56□□□□□ -2.16
APAF1-208ENST00000549007 SPRR2GQ9BYE4 73 aa1.56□□□□□ -2.16
APAF1-208ENST00000549007 MT1BP07438 61 aa1.56□□□□□ -2.16
APAF1-208ENST00000549007 ROMO1P60602 79 aa1.56□□□□□ -2.16
APAF1-208ENST00000549007 KRTAP12-3P60328 96 aa1.55□□□□□ -2.16
APAF1-208ENST00000549007 KRTAP5-1Q6L8H4 278 aa1.55□□□□□ -2.16
APAF1-208ENST00000549007 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.54□□□□□ -2.16
APAF1-208ENST00000549007 KRTAP19-8Q3LI54 63 aa1.54□□□□□ -2.16
APAF1-208ENST00000549007 DSTQ03001 7570 aaKnown RBP1.54□□□□□ -2.16
APAF1-208ENST00000549007 CRIPTQ9P021 101 aa1.54□□□□□ -2.16
APAF1-208ENST00000549007 KRTAP19-6Q3LI70 58 aa1.52□□□□□ -2.17
APAF1-208ENST00000549007 PLAC4Q8WY50 150 aa1.5□□□□□ -2.17
APAF1-208ENST00000549007 MACF1Q9UPN3 7388 aaKnown RBP1.5□□□□□ -2.17
APAF1-208ENST00000549007 MT1XP80297 61 aa1.49□□□□□ -2.17
APAF1-208ENST00000549007 KMT2DO14686 5537 aa1.48□□□□□ -2.17
APAF1-208ENST00000549007 SYNE1Q8NF91 8797 aaKnown RBP1.48□□□□□ -2.17
APAF1-208ENST00000549007 KRTAP5-5Q701N2 237 aaPredicted RBP1.47□□□□□ -2.17
APAF1-208ENST00000549007 SYNE2Q8WXH0 6885 aaKnown RBP1.47□□□□□ -2.17
APAF1-208ENST00000549007 MUC12Q9UKN1 5478 aa1.41□□□□□ -2.18
APAF1-208ENST00000549007 C10orf95Q9H7T3 257 aa1.4□□□□□ -2.19
APAF1-208ENST00000549007 MDN1Q9NU22 5596 aa1.39□□□□□ -2.19
APAF1-208ENST00000549007 KRTAP8-1Q8IUC2 63 aa1.38□□□□□ -2.19
APAF1-208ENST00000549007 KRTAP4-4Q9BYR3 166 aa1.38□□□□□ -2.19
APAF1-208ENST00000549007 SPRR2FQ96RM1 72 aa1.38□□□□□ -2.19
APAF1-208ENST00000549007 NEBP20929 6669 aa1.35□□□□□ -2.19
APAF1-208ENST00000549007 TNP1P09430 55 aa1.35□□□□□ -2.19
APAF1-208ENST00000549007 KRTAP5-9P26371 169 aa1.35□□□□□ -2.19
APAF1-208ENST00000549007 KRTAP12-4P60329 112 aa1.35□□□□□ -2.19
APAF1-208ENST00000549007 INE1O15225 51 aa1.34□□□□□ -2.2
APAF1-208ENST00000549007 KRTAP19-5Q3LI72 72 aa1.33□□□□□ -2.2
APAF1-208ENST00000549007 SPRR2EP22531 72 aa1.33□□□□□ -2.2
APAF1-208ENST00000549007 SPRR2BP35325 72 aa1.33□□□□□ -2.2
APAF1-208ENST00000549007 SPRR2AP35326 72 aa1.33□□□□□ -2.2
APAF1-208ENST00000549007 KRTAP19-7Q3SYF9 63 aa1.32□□□□□ -2.2
APAF1-208ENST00000549007 GPR98Q8WXG9 6306 aa1.32□□□□□ -2.2
APAF1-208ENST00000549007 MT1EP04732 61 aa1.31□□□□□ -2.2
APAF1-208ENST00000549007 LCE1CQ5T751 118 aa1.3□□□□□ -2.2
APAF1-208ENST00000549007 LCE1BQ5T7P3 118 aa1.3□□□□□ -2.2
APAF1-208ENST00000549007 KRTAP5-4Q6L8H1 288 aa1.28□□□□□ -2.2
APAF1-208ENST00000549007 SPRR2DP22532 72 aa1.28□□□□□ -2.21
APAF1-208ENST00000549007 KRTAP19-3Q7Z4W3 81 aa1.27□□□□□ -2.21
APAF1-208ENST00000549007 MT1LQ93083 61 aa1.27□□□□□ -2.21
APAF1-208ENST00000549007 KRTAP4-3Q9BYR4 195 aa1.27□□□□□ -2.21
APAF1-208ENST00000549007 KRTAP20-1Q3LI63 56 aa1.25□□□□□ -2.21
APAF1-208ENST00000549007 MT1MQ8N339 61 aa1.24□□□□□ -2.21
APAF1-208ENST00000549007 MT1GP13640 62 aa1.23□□□□□ -2.21
APAF1-208ENST00000549007 MUC19Q7Z5P9 8384 aa1.23□□□□□ -2.21
APAF1-208ENST00000549007 KRTAP2-3P0C7H8 128 aa1.22□□□□□ -2.21
APAF1-208ENST00000549007 KRTAP2-4Q9BYR9 128 aa1.22□□□□□ -2.21
APAF1-208ENST00000549007 KRTAP2-1Q9BYU5 128 aa1.19□□□□□ -2.22
APAF1-208ENST00000549007 KRTAP5-7Q6L8G8 165 aa1.19□□□□□ -2.22
APAF1-208ENST00000549007 AHNAK2Q8IVF2 5795 aa1.18□□□□□ -2.22
APAF1-208ENST00000549007 MT4P47944 62 aa1.14□□□□□ -2.23
APAF1-208ENST00000549007 AHNAKQ09666 5890 aaKnown RBP1.12□□□□□ -2.23
APAF1-208ENST00000549007 KRTAP5-8O75690 187 aa1.1□□□□□ -2.23
APAF1-208ENST00000549007 KRTAP6-1Q3LI64 71 aa1.08□□□□□ -2.24
APAF1-208ENST00000549007 MT1AP04731 61 aa1.06□□□□□ -2.24
APAF1-208ENST00000549007 KRTAP20-2Q3LI61 65 aa1.05□□□□□ -2.24
APAF1-208ENST00000549007 KRTAP5-2Q701N4 177 aa1.02□□□□□ -2.25
APAF1-208ENST00000549007 KRTAP6-2Q3LI66 62 aa1.02□□□□□ -2.25
APAF1-208ENST00000549007 MUC5ACP98088 5654 aa1□□□□□ -2.25
APAF1-208ENST00000549007 KRTAP5-10Q6L8G5 202 aa0.97□□□□□ -2.25
APAF1-208ENST00000549007 KRTAP21-2Q3LI59 83 aa0.95□□□□□ -2.26
APAF1-208ENST00000549007 PRM1P04553 51 aa0.77□□□□□ -2.29
APAF1-208ENST00000549007 PHGR1C9JFL3 82 aa0.61□□□□□ -2.31
APAF1-208ENST00000549007 KRTAP21-1Q3LI58 79 aa0.52□□□□□ -2.33
APAF1-208ENST00000549007 MUC16Q8WXI7 14507 aa0.5□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 96 ms