RNA–Protein interactions for RNA: ENST00000547878.6

TMEM116-205, Transcript of transmembrane protein 116, humanhuman

TSL 2

Gene TMEM116, Length 1,716 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-205ENST00000547878 NEBP20929 6669 aa3.81□□□□□ -1.8
TMEM116-205ENST00000547878 KRTAP10-10P60014 251 aa3.81□□□□□ -1.8
TMEM116-205ENST00000547878 KRTAP20-1Q3LI63 56 aa3.81□□□□□ -1.8
TMEM116-205ENST00000547878 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
TMEM116-205ENST00000547878 MUC12Q9UKN1 5478 aa3.8□□□□□ -1.8
TMEM116-205ENST00000547878 LCE5AQ5TCM9 118 aa3.8□□□□□ -1.8
TMEM116-205ENST00000547878 TNP1P09430 55 aa3.7□□□□□ -1.82
TMEM116-205ENST00000547878 SPRR2GQ9BYE4 73 aa3.68□□□□□ -1.82
TMEM116-205ENST00000547878 MDN1Q9NU22 5596 aa3.67□□□□□ -1.82
TMEM116-205ENST00000547878 KMT2DO14686 5537 aa3.61□□□□□ -1.83
TMEM116-205ENST00000547878 KRTAP2-3P0C7H8 128 aa3.58□□□□□ -1.84
TMEM116-205ENST00000547878 KRTAP2-4Q9BYR9 128 aa3.58□□□□□ -1.84
TMEM116-205ENST00000547878 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
TMEM116-205ENST00000547878 KRTAP19-8Q3LI54 63 aa3.52□□□□□ -1.85
TMEM116-205ENST00000547878 MT1BP07438 61 aa3.46□□□□□ -1.86
TMEM116-205ENST00000547878 LCE3AQ5TA76 89 aa3.46□□□□□ -1.86
TMEM116-205ENST00000547878 KRTAP8-1Q8IUC2 63 aa3.46□□□□□ -1.86
TMEM116-205ENST00000547878 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
TMEM116-205ENST00000547878 KRTAP2-1Q9BYU5 128 aa3.45□□□□□ -1.86
TMEM116-205ENST00000547878 SPRR2EP22531 72 aa3.43□□□□□ -1.86
TMEM116-205ENST00000547878 SPRR2BP35325 72 aa3.43□□□□□ -1.86
TMEM116-205ENST00000547878 SPRR2AP35326 72 aa3.43□□□□□ -1.86
TMEM116-205ENST00000547878 KRTAP10-5P60370 271 aa3.43□□□□□ -1.86
TMEM116-205ENST00000547878 MT1XP80297 61 aa3.41□□□□□ -1.86
TMEM116-205ENST00000547878 SPRR2FQ96RM1 72 aa3.39□□□□□ -1.87
TMEM116-205ENST00000547878 GPR98Q8WXG9 6306 aa3.37□□□□□ -1.87
TMEM116-205ENST00000547878 KRTAP10-12P60413 245 aa3.36□□□□□ -1.87
TMEM116-205ENST00000547878 LCE1AQ5T7P2 110 aa3.35□□□□□ -1.87
TMEM116-205ENST00000547878 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
TMEM116-205ENST00000547878 SPRR2DP22532 72 aa3.31□□□□□ -1.88
TMEM116-205ENST00000547878 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
TMEM116-205ENST00000547878 DSTQ03001 7570 aaKnown RBP3.15□□□□□ -1.9
TMEM116-205ENST00000547878 KRTAP19-5Q3LI72 72 aa3.14□□□□□ -1.91
TMEM116-205ENST00000547878 LCE3CQ5T5A8 94 aa3.13□□□□□ -1.91
TMEM116-205ENST00000547878 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
TMEM116-205ENST00000547878 KRTAP19-7Q3SYF9 63 aa3.04□□□□□ -1.92
TMEM116-205ENST00000547878 AHNAK2Q8IVF2 5795 aa3.03□□□□□ -1.92
TMEM116-205ENST00000547878 KRTAP5-10Q6L8G5 202 aa3.02□□□□□ -1.93
TMEM116-205ENST00000547878 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
TMEM116-205ENST00000547878 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
TMEM116-205ENST00000547878 MT1EP04732 61 aa2.96□□□□□ -1.94
TMEM116-205ENST00000547878 MT4P47944 62 aa2.96□□□□□ -1.94
TMEM116-205ENST00000547878 MT1LQ93083 61 aa2.96□□□□□ -1.94
TMEM116-205ENST00000547878 MT3P25713 68 aa2.95□□□□□ -1.94
TMEM116-205ENST00000547878 KRTAP5-7Q6L8G8 165 aa2.93□□□□□ -1.94
TMEM116-205ENST00000547878 KRTAP19-3Q7Z4W3 81 aa2.84□□□□□ -1.96
TMEM116-205ENST00000547878 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
TMEM116-205ENST00000547878 KRTAP12-4P60329 112 aa2.77□□□□□ -1.97
TMEM116-205ENST00000547878 MT1GP13640 62 aa2.76□□□□□ -1.97
TMEM116-205ENST00000547878 MT1MQ8N339 61 aa2.76□□□□□ -1.97
TMEM116-205ENST00000547878 KRTAP4-3Q9BYR4 195 aa2.7□□□□□ -1.98
TMEM116-205ENST00000547878 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
TMEM116-205ENST00000547878 LCE1EQ5T753 118 aa2.65□□□□□ -1.98
TMEM116-205ENST00000547878 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
TMEM116-205ENST00000547878 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
TMEM116-205ENST00000547878 MUC5ACP98088 5654 aa2.56□□□□□ -2
TMEM116-205ENST00000547878 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
TMEM116-205ENST00000547878 MT1AP04731 61 aa2.55□□□□□ -2
TMEM116-205ENST00000547878 PRM1P04553 51 aa2.52□□□□□ -2.01
TMEM116-205ENST00000547878 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
TMEM116-205ENST00000547878 KRTAP5-5Q701N2 237 aaPredicted RBP2.51□□□□□ -2.01
TMEM116-205ENST00000547878 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
TMEM116-205ENST00000547878 SYNE1Q8NF91 8797 aaKnown RBP2.48□□□□□ -2.01
TMEM116-205ENST00000547878 KRTAP6-1Q3LI64 71 aa2.48□□□□□ -2.01
TMEM116-205ENST00000547878 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
TMEM116-205ENST00000547878 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
TMEM116-205ENST00000547878 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
TMEM116-205ENST00000547878 LCE3DQ9BYE3 92 aa2.41□□□□□ -2.02
TMEM116-205ENST00000547878 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
TMEM116-205ENST00000547878 OBSCNQ5VST9 7968 aa2.32□□□□□ -2.04
TMEM116-205ENST00000547878 KRTAP6-2Q3LI66 62 aa2.25□□□□□ -2.05
TMEM116-205ENST00000547878 LCE1BQ5T7P3 118 aa1.89□□□□□ -2.11
TMEM116-205ENST00000547878 LCE1CQ5T751 118 aa1.8□□□□□ -2.12
TMEM116-205ENST00000547878 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
TMEM116-205ENST00000547878 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
TMEM116-205ENST00000547878 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
TMEM116-205ENST00000547878 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
TMEM116-205ENST00000547878 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 95 ms