RNA–Protein interactions for RNA: ENST00000547461.2

TCTN1-220, Transcript of tectonic family member 1, humanhuman

TSL 3

Gene TCTN1, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN1-220ENST00000547461 SPATA8Q6RVD6 105 aa3.14□□□□□ -1.91
TCTN1-220ENST00000547461 KRTAP12-2P59991 146 aa3.12□□□□□ -1.91
TCTN1-220ENST00000547461 MDN1Q9NU22 5596 aa3.1□□□□□ -1.91
TCTN1-220ENST00000547461 ADM2Q7Z4H4 148 aa3.1□□□□□ -1.91
TCTN1-220ENST00000547461 LCE3AQ5TA76 89 aa3.09□□□□□ -1.91
TCTN1-220ENST00000547461 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.91
TCTN1-220ENST00000547461 LINC01554Q52M75 96 aa3.07□□□□□ -1.92
TCTN1-220ENST00000547461 KRTAP2-1Q9BYU5 128 aa3.06□□□□□ -1.92
TCTN1-220ENST00000547461 CSAG1Q6PB30 78 aa3.05□□□□□ -1.92
TCTN1-220ENST00000547461 H1FX-AS1Q4G0G2 97 aa3.04□□□□□ -1.92
TCTN1-220ENST00000547461 A0A1B0GU33 70 aa3.01□□□□□ -1.93
TCTN1-220ENST00000547461 K7ERS5 55 aa3.01□□□□□ -1.93
TCTN1-220ENST00000547461 H0YAA0 97 aa2.99□□□□□ -1.93
TCTN1-220ENST00000547461 SPRR2EP22531 72 aa2.97□□□□□ -1.93
TCTN1-220ENST00000547461 SPRR2BP35325 72 aa2.97□□□□□ -1.93
TCTN1-220ENST00000547461 SPRR2AP35326 72 aa2.97□□□□□ -1.93
TCTN1-220ENST00000547461 KRTAP25-1Q3LHN0 102 aa2.95□□□□□ -1.94
TCTN1-220ENST00000547461 MT1BP07438 61 aa2.94□□□□□ -1.94
TCTN1-220ENST00000547461 KRTAP19-8Q3LI54 63 aa2.91□□□□□ -1.94
TCTN1-220ENST00000547461 S4R3F8 94 aa2.9□□□□□ -1.95
TCTN1-220ENST00000547461 A0A0D9SG42 100 aa2.89□□□□□ -1.95
TCTN1-220ENST00000547461 ROMO1P60602 79 aa2.89□□□□□ -1.95
TCTN1-220ENST00000547461 KRTAP5-5Q701N2 237 aaPredicted RBP2.89□□□□□ -1.95
TCTN1-220ENST00000547461 SPRR2FQ96RM1 72 aa2.89□□□□□ -1.95
TCTN1-220ENST00000547461 SPRR2GQ9BYE4 73 aa2.89□□□□□ -1.95
TCTN1-220ENST00000547461 CRIPTQ9P021 101 aa2.89□□□□□ -1.95
TCTN1-220ENST00000547461 SPRR2DP22532 72 aa2.88□□□□□ -1.95
TCTN1-220ENST00000547461 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
TCTN1-220ENST00000547461 SPINT4Q6UDR6 99 aa2.84□□□□□ -1.95
TCTN1-220ENST00000547461 KRTAP13-4Q3LI77 160 aa2.81□□□□□ -1.96
TCTN1-220ENST00000547461 KRTAP8-1Q8IUC2 63 aa2.79□□□□□ -1.96
TCTN1-220ENST00000547461 PRO2289Q9P1D8 64 aa2.79□□□□□ -1.96
TCTN1-220ENST00000547461 P0C880 135 aa2.78□□□□□ -1.96
TCTN1-220ENST00000547461 C10orf95Q9H7T3 257 aa2.77□□□□□ -1.97
TCTN1-220ENST00000547461 PLAC4Q8WY50 150 aa2.75□□□□□ -1.97
TCTN1-220ENST00000547461 DSTQ03001 7570 aaKnown RBP2.73□□□□□ -1.97
TCTN1-220ENST00000547461 M0QZ58 72 aa2.72□□□□□ -1.97
TCTN1-220ENST00000547461 KRTAP12-1P59990 96 aa2.72□□□□□ -1.97
TCTN1-220ENST00000547461 MT1XP80297 61 aa2.72□□□□□ -1.97
TCTN1-220ENST00000547461 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
TCTN1-220ENST00000547461 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
TCTN1-220ENST00000547461 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
TCTN1-220ENST00000547461 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
TCTN1-220ENST00000547461 HMCN1Q96RW7 5635 aa2.68□□□□□ -1.98
TCTN1-220ENST00000547461 R4GN34 69 aa2.66□□□□□ -1.98
TCTN1-220ENST00000547461 KRTAP5-10Q6L8G5 202 aa2.64□□□□□ -1.99
TCTN1-220ENST00000547461 KRTAP5-7Q6L8G8 165 aa2.61□□□□□ -1.99
TCTN1-220ENST00000547461 MT4P47944 62 aa2.57□□□□□ -2
TCTN1-220ENST00000547461 CAMK2N1Q7Z7J9 78 aa2.57□□□□□ -2
TCTN1-220ENST00000547461 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
TCTN1-220ENST00000547461 PP632Q6XCG6 107 aa2.53□□□□□ -2
TCTN1-220ENST00000547461 LUZP6Q538Z0 58 aa2.51□□□□□ -2.01
TCTN1-220ENST00000547461 TNP1P09430 55 aa2.46□□□□□ -2.02
TCTN1-220ENST00000547461 KRTAP19-3Q7Z4W3 81 aa2.45□□□□□ -2.02
TCTN1-220ENST00000547461 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
TCTN1-220ENST00000547461 MT1EP04732 61 aa2.43□□□□□ -2.02
TCTN1-220ENST00000547461 KRTAP19-7Q3SYF9 63 aa2.41□□□□□ -2.02
TCTN1-220ENST00000547461 MT1GP13640 62 aa2.37□□□□□ -2.03
TCTN1-220ENST00000547461 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
TCTN1-220ENST00000547461 KRTAP19-5Q3LI72 72 aa2.35□□□□□ -2.03
TCTN1-220ENST00000547461 MT1MQ8N339 61 aa2.33□□□□□ -2.04
TCTN1-220ENST00000547461 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
TCTN1-220ENST00000547461 MT1LQ93083 61 aa2.29□□□□□ -2.04
TCTN1-220ENST00000547461 MUC5ACP98088 5654 aa2.28□□□□□ -2.04
TCTN1-220ENST00000547461 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
TCTN1-220ENST00000547461 KRTAP20-2Q3LI61 65 aa2.23□□□□□ -2.05
TCTN1-220ENST00000547461 KRTAP12-4P60329 112 aa2.19□□□□□ -2.06
TCTN1-220ENST00000547461 INE1O15225 51 aa2.17□□□□□ -2.06
TCTN1-220ENST00000547461 KRTAP12-3P60328 96 aa2.17□□□□□ -2.06
TCTN1-220ENST00000547461 SYNE1Q8NF91 8797 aaKnown RBP2.14□□□□□ -2.07
TCTN1-220ENST00000547461 KRTAP6-1Q3LI64 71 aa1.95□□□□□ -2.1
TCTN1-220ENST00000547461 MT1AP04731 61 aa1.94□□□□□ -2.1
TCTN1-220ENST00000547461 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
TCTN1-220ENST00000547461 KRTAP6-2Q3LI66 62 aa1.92□□□□□ -2.1
TCTN1-220ENST00000547461 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
TCTN1-220ENST00000547461 PRM1P04553 51 aa1.56□□□□□ -2.16
TCTN1-220ENST00000547461 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
TCTN1-220ENST00000547461 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 119.8 ms